RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-221ENST00000529873 CCDC191Q8NCU4 936 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 AEBP2Q6ZN18 517 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-221ENST00000529873 MAP7D2Q96T17 732 aa10.2□□□□□ -0.78
CTNND1-221ENST00000529873 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 DNAJC2Q99543 621 aaKnown RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 TCP11L2Q8N4U5 519 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 CCDC39Q9UFE4 941 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
CTNND1-221ENST00000529873 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-221ENST00000529873 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-221ENST00000529873 GNAI2P04899 355 aa10.18□□□□□ -0.78
CTNND1-221ENST00000529873 ZNF526Q8TF50 670 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-221ENST00000529873 EPS15P42566 896 aa10.18□□□□□ -0.78
CTNND1-221ENST00000529873 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
CTNND1-221ENST00000529873 ZNF692Q9BU19 519 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-221ENST00000529873 EXOSC9Q06265 439 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 TAF3Q5VWG9 929 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 AK7Q96M32 723 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 CCT4P50991 539 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 NAP1L1P55209 391 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 RPGRIP1LQ68CZ1 1315 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 CUL7Q14999 1698 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 MCM2P49736 904 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 NESP48681 1621 aa10.17□□□□□ -0.78
CTNND1-221ENST00000529873 SURF6O75683 361 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 BRD2P25440 801 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 MTERF4Q7Z6M4 381 aaKnown RBP10.17□□□□□ -0.78
CTNND1-221ENST00000529873 RRP9O43818 475 aaKnown RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 CWC15Q9P013 229 aaKnown RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 CT47B1P0C2W7 299 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
CTNND1-221ENST00000529873 KIF14Q15058 1648 aa10.16□□□□□ -0.78
CTNND1-221ENST00000529873 RDXP35241 583 aaKnown RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 DCTN1Q14203 1278 aa10.16□□□□□ -0.78
CTNND1-221ENST00000529873 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■□□ 16.3
CTNND1-221ENST00000529873 IFT57Q9NWB7 429 aa10.16□□□□□ -0.78
CTNND1-221ENST00000529873 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
CTNND1-221ENST00000529873 GNL3LQ9NVN8 582 aaKnown RBP10.16□□□□□ -0.78
CTNND1-221ENST00000529873 CABP4P57796 275 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 RUFY1Q96T51 708 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-221ENST00000529873 WDR63Q8IWG1 891 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 RABEP1Q15276 862 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 THEMISQ8N1K5 641 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-221ENST00000529873 CNNM1Q9NRU3 951 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
CTNND1-221ENST00000529873 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-221ENST00000529873 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 TSPY26PQ9H489 355 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 STK11IPQ8N1F8 1099 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 POLA1P09884 1462 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-221ENST00000529873 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 CT47A1Q5JQC4 288 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-221ENST00000529873 PDILTQ8N807 584 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-221ENST00000529873 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
CTNND1-221ENST00000529873 IQGAP2Q13576 1575 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 PRXQ9BXM0 1461 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 PCF11O94913 1555 aaKnown RBP10.13□□□□□ -0.79
CTNND1-221ENST00000529873 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 CCP110O43303 1012 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 MRE11P49959 708 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 PTPN23Q9H3S7 1636 aa10.13□□□□□ -0.79
CTNND1-221ENST00000529873 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-221ENST00000529873 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-221ENST00000529873 FAM177BA6PVY3 158 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms