RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-212ENST00000529312 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
CCDC90B-212ENST00000529312 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
CCDC90B-212ENST00000529312 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
CCDC90B-212ENST00000529312 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
CCDC90B-212ENST00000529312 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
CCDC90B-212ENST00000529312 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
CCDC90B-212ENST00000529312 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
CCDC90B-212ENST00000529312 CCDC9Q9Y3X0 531 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-212ENST00000529312 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
CCDC90B-212ENST00000529312 TNS3Q68CZ2 1445 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 FMN2Q9NZ56 1722 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 SRPK2P78362 688 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 VPS72Q15906 364 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 SIN3AQ96ST3 1273 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
CCDC90B-212ENST00000529312 ATRNO75882 1429 aa11.18□□□□□ -0.62
CCDC90B-212ENST00000529312 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
CCDC90B-212ENST00000529312 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
CCDC90B-212ENST00000529312 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-212ENST00000529312 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
CCDC90B-212ENST00000529312 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-212ENST00000529312 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-212ENST00000529312 ACEP12821 1306 aa11.16□□□□□ -0.62
CCDC90B-212ENST00000529312 EVX2Q03828 476 aa11.16□□□□□ -0.62
CCDC90B-212ENST00000529312 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-212ENST00000529312 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
CCDC90B-212ENST00000529312 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-212ENST00000529312 EVC2Q86UK5 1308 aa11.15□□□□□ -0.62
CCDC90B-212ENST00000529312 SF3B2Q13435 895 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-212ENST00000529312 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
CCDC90B-212ENST00000529312 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
CCDC90B-212ENST00000529312 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
CCDC90B-212ENST00000529312 TULP4Q9NRJ4 1543 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 EVA1CP58658 441 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 RGS12O14924 1447 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 BRD4O60885 1362 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 SLIT2O94813 1529 aa11.14□□□□□ -0.63
CCDC90B-212ENST00000529312 ADGRB2O60241 1585 aa11.13□□□□□ -0.63
CCDC90B-212ENST00000529312 CABP2Q9NPB3 220 aa11.13□□□□□ -0.63
CCDC90B-212ENST00000529312 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
CCDC90B-212ENST00000529312 RGPD8O14715 1765 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-212ENST00000529312 A0A0G2JS52 829 aa11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 MYT1Q01538 1121 aa11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 KRT27Q7Z3Y8 459 aa11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 POLR3AO14802 1390 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
CCDC90B-212ENST00000529312 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-212ENST00000529312 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
CCDC90B-212ENST00000529312 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-212ENST00000529312 NUTM2GQ5VZR2 741 aa11.1□□□□□ -0.63
CCDC90B-212ENST00000529312 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
CCDC90B-212ENST00000529312 RALGAPBQ86X10 1494 aa11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 GCP02774 474 aa11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 NLRP6P59044 892 aa11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
CCDC90B-212ENST00000529312 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
CCDC90B-212ENST00000529312 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 CHRNA2Q15822 529 aa11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 PPIP5K1Q6PFW1 1433 aa11.07□□□□□ -0.64
CCDC90B-212ENST00000529312 ATP7BP35670 1465 aa11.06□□□□□ -0.64
CCDC90B-212ENST00000529312 KIAA0232Q92628 1395 aa11.06□□□□□ -0.64
CCDC90B-212ENST00000529312 C11orf95C9JLR9 678 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-212ENST00000529312 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
CCDC90B-212ENST00000529312 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-212ENST00000529312 BAG6P46379 1132 aa11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
CCDC90B-212ENST00000529312 FAM196AQ6ZSG2 479 aa11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 TCP11L2Q8N4U5 519 aa11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 TTC21AQ8NDW8 1320 aa11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-212ENST00000529312 CPDO75976 1380 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 NWD2Q9ULI1 1742 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 USP19O94966 1318 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
CCDC90B-212ENST00000529312 TRPM3Q9HCF6 1732 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-212ENST00000529312 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
CCDC90B-212ENST00000529312 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-212ENST00000529312 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
CCDC90B-212ENST00000529312 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-212ENST00000529312 GLI3P10071 1580 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms