RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
EIF3F-202ENST00000528653 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
EIF3F-202ENST00000528653 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
EIF3F-202ENST00000528653 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
EIF3F-202ENST00000528653 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
EIF3F-202ENST00000528653 SSH2Q76I76 1423 aa18.89■□□□□ 0.61
EIF3F-202ENST00000528653 ZNF692Q9BU19 519 aaPredicted RBP18.88■□□□□ 0.61
EIF3F-202ENST00000528653 NSD3Q9BZ95 1437 aa18.88■□□□□ 0.61
EIF3F-202ENST00000528653 PIK3C2AO00443 1686 aa18.87■□□□□ 0.61
EIF3F-202ENST00000528653 BRD4O60885 1362 aaPredicted RBP18.87■□□□□ 0.61
EIF3F-202ENST00000528653 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
EIF3F-202ENST00000528653 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
EIF3F-202ENST00000528653 PANK3Q9H999 370 aa18.86■□□□□ 0.61
EIF3F-202ENST00000528653 KIF20BQ96Q89 1820 aa18.86■□□□□ 0.61
EIF3F-202ENST00000528653 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
EIF3F-202ENST00000528653 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
EIF3F-202ENST00000528653 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
EIF3F-202ENST00000528653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.84■□□□□ 0.61
EIF3F-202ENST00000528653 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
EIF3F-202ENST00000528653 ARHGEF10O15013 1369 aa18.83■□□□□ 0.61
EIF3F-202ENST00000528653 PNPLA6Q8IY17 1366 aa18.83■□□□□ 0.61
EIF3F-202ENST00000528653 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.6
EIF3F-202ENST00000528653 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
EIF3F-202ENST00000528653 RGS17Q9UGC6 210 aaPredicted RBP18.83■□□□□ 0.6
EIF3F-202ENST00000528653 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
EIF3F-202ENST00000528653 TTC21AQ8NDW8 1320 aa18.82■□□□□ 0.6
EIF3F-202ENST00000528653 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
EIF3F-202ENST00000528653 JCADQ9P266 1359 aa18.81■□□□□ 0.6
EIF3F-202ENST00000528653 MARF1Q9Y4F3 1742 aaKnown RBP18.81■□□□□ 0.6
EIF3F-202ENST00000528653 NME9Q86XW9 330 aa18.81■□□□□ 0.6
EIF3F-202ENST00000528653 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
EIF3F-202ENST00000528653 USP54Q70EL1 1684 aa18.8■□□□□ 0.6
EIF3F-202ENST00000528653 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
EIF3F-202ENST00000528653 PHRF1Q9P1Y6 1649 aaKnown RBP18.79■□□□□ 0.6
EIF3F-202ENST00000528653 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
EIF3F-202ENST00000528653 DDX10Q13206 875 aaKnown RBP18.79■□□□□ 0.6
EIF3F-202ENST00000528653 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
EIF3F-202ENST00000528653 ANKRD26Q9UPS8 1709 aa18.77■□□□□ 0.6
EIF3F-202ENST00000528653 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
EIF3F-202ENST00000528653 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
EIF3F-202ENST00000528653 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
EIF3F-202ENST00000528653 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
EIF3F-202ENST00000528653 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
EIF3F-202ENST00000528653 NLRP6P59044 892 aa18.76■□□□□ 0.59
EIF3F-202ENST00000528653 SLIT3O75094 1523 aa18.75■□□□□ 0.59
EIF3F-202ENST00000528653 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
EIF3F-202ENST00000528653 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
EIF3F-202ENST00000528653 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
EIF3F-202ENST00000528653 USP19O94966 1318 aa18.74■□□□□ 0.59
EIF3F-202ENST00000528653 FYB1O15117 783 aa18.74■□□□□ 0.59
EIF3F-202ENST00000528653 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
EIF3F-202ENST00000528653 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
EIF3F-202ENST00000528653 NSD2O96028 1365 aa18.72■□□□□ 0.59
EIF3F-202ENST00000528653 LRP6O75581 1613 aa18.72■□□□□ 0.59
EIF3F-202ENST00000528653 AMER1Q5JTC6 1135 aaPredicted RBP18.72■□□□□ 0.59
EIF3F-202ENST00000528653 NUTM2BA6NNL0 878 aaPredicted RBP18.71■□□□□ 0.59
EIF3F-202ENST00000528653 NUTM2EB1AL46 878 aaPredicted RBP18.71■□□□□ 0.59
EIF3F-202ENST00000528653 NUTM2AQ8IVF1 878 aaPredicted RBP18.71■□□□□ 0.59
EIF3F-202ENST00000528653 COG3Q96JB2 828 aa18.71■□□□□ 0.59
EIF3F-202ENST00000528653 SPATA31A6Q5VVP1 1343 aa18.71■□□□□ 0.59
EIF3F-202ENST00000528653 NFAT5O94916 1531 aa18.7■□□□□ 0.58
EIF3F-202ENST00000528653 SOX12O15370 315 aa18.7■□□□□ 0.58
EIF3F-202ENST00000528653 HAP1P54257 671 aaPredicted RBP18.7■□□□□ 0.58
EIF3F-202ENST00000528653 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
EIF3F-202ENST00000528653 POTEAQ6S8J7 498 aa18.7■□□□□ 0.58
EIF3F-202ENST00000528653 CC2D1BQ5T0F9 858 aaKnown RBP18.68■□□□□ 0.58
EIF3F-202ENST00000528653 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
EIF3F-202ENST00000528653 GCP02774 474 aa18.66■□□□□ 0.58
EIF3F-202ENST00000528653 LTN1O94822 1766 aa18.65■□□□□ 0.58
EIF3F-202ENST00000528653 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
EIF3F-202ENST00000528653 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
EIF3F-202ENST00000528653 ZC3H6P61129 1189 aaKnown RBP18.64■□□□□ 0.57
EIF3F-202ENST00000528653 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
EIF3F-202ENST00000528653 KIAA0232Q92628 1395 aa18.64■□□□□ 0.57
EIF3F-202ENST00000528653 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
EIF3F-202ENST00000528653 TNNT2P45379 298 aaPredicted RBP18.63■□□□□ 0.57
EIF3F-202ENST00000528653 PLCH1Q4KWH8 1693 aa18.62■□□□□ 0.57
EIF3F-202ENST00000528653 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
EIF3F-202ENST00000528653 CPDO75976 1380 aa18.61■□□□□ 0.57
EIF3F-202ENST00000528653 FBLN1P23142 703 aa18.61■□□□□ 0.57
EIF3F-202ENST00000528653 MEX3CQ5U5Q3 659 aaKnown RBP18.61■□□□□ 0.57
EIF3F-202ENST00000528653 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
EIF3F-202ENST00000528653 MAP2P11137 1827 aaKnown RBP18.6■□□□□ 0.57
EIF3F-202ENST00000528653 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
EIF3F-202ENST00000528653 AATKQ6ZMQ8 1374 aa18.59■□□□□ 0.57
EIF3F-202ENST00000528653 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
EIF3F-202ENST00000528653 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
EIF3F-202ENST00000528653 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
EIF3F-202ENST00000528653 COL18A1P39060 1754 aa18.58■□□□□ 0.57
EIF3F-202ENST00000528653 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.57
EIF3F-202ENST00000528653 MAP3K19Q56UN5 1328 aa18.58■□□□□ 0.57
EIF3F-202ENST00000528653 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
EIF3F-202ENST00000528653 ABCC6O95255 1503 aa18.58■□□□□ 0.56
EIF3F-202ENST00000528653 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
EIF3F-202ENST00000528653 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
EIF3F-202ENST00000528653 NWD2Q9ULI1 1742 aa18.56■□□□□ 0.56
EIF3F-202ENST00000528653 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
EIF3F-202ENST00000528653 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
EIF3F-202ENST00000528653 RGPD5Q99666 1765 aa18.55■□□□□ 0.56
EIF3F-202ENST00000528653 NRAPQ86VF7 1730 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms