RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 POGZQ7Z3K3 1410 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 ESCO1Q5FWF5 840 aa10.21□□□□□ -0.77
CTNND1-219ENST00000528621 SLC52A1Q9NWF4 448 aa10.21□□□□□ -0.77
CTNND1-219ENST00000528621 DHX8Q14562 1220 aaKnown RBP10.21□□□□□ -0.77
CTNND1-219ENST00000528621 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-219ENST00000528621 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.77
CTNND1-219ENST00000528621 CCDC39Q9UFE4 941 aa10.21□□□□□ -0.77
CTNND1-219ENST00000528621 ANKRD30BQ9BXX2 1392 aa10.21□□□□□ -0.77
CTNND1-219ENST00000528621 KIF14Q15058 1648 aa10.21□□□□□ -0.78
CTNND1-219ENST00000528621 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.78
CTNND1-219ENST00000528621 CCT4P50991 539 aaKnown RBP10.21□□□□□ -0.78
CTNND1-219ENST00000528621 POLA1P09884 1462 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-219ENST00000528621 IQGAP2Q13576 1575 aa10.21□□□□□ -0.78
CTNND1-219ENST00000528621 ATAD2Q6PL18 1390 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 TEX35Q5T0J7 233 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-219ENST00000528621 ACBD3Q9H3P7 528 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 RABEP1Q15276 862 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
CTNND1-219ENST00000528621 TCP11L2Q8N4U5 519 aa10.2□□□□□ -0.78
CTNND1-219ENST00000528621 GNAI2P04899 355 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 DNAJC2Q99543 621 aaKnown RBP10.19□□□□□ -0.78
CTNND1-219ENST00000528621 CDK19Q9BWU1 502 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 CCP110O43303 1012 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 PRKAR2BP31323 418 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 THEMISQ8N1K5 641 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-219ENST00000528621 MAP3K1Q13233 1512 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
CTNND1-219ENST00000528621 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-219ENST00000528621 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
CTNND1-219ENST00000528621 RTEL1-TNFRSF6BF6WH68 1400 aa10.19□□□□□ -0.78
CTNND1-219ENST00000528621 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-219ENST00000528621 CDR1P51861 262 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 ZNF396Q96N95 335 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-219ENST00000528621 ARGLU1Q9NWB6 273 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-219ENST00000528621 MBD3O95983 291 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 PDCP20941 246 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 EPS15P42566 896 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 ABCA10Q8WWZ4 1543 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 MRE11P49959 708 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
CTNND1-219ENST00000528621 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.18□□□□□ -0.781e-7■■■□□ 16.3
CTNND1-219ENST00000528621 PTPN23Q9H3S7 1636 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 EXOSC9Q06265 439 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 ANKRD1Q15327 319 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 AK7Q96M32 723 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 ZNF428Q96B54 188 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 GNL3LQ9NVN8 582 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 EPRSP07814 1512 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 NAP1L1P55209 391 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 AEBP1Q8IUX7 1158 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 PIP4K2AP48426 406 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
CTNND1-219ENST00000528621 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 SURF6O75683 361 aaKnown RBP10.17□□□□□ -0.78
CTNND1-219ENST00000528621 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-219ENST00000528621 ZSCAN25Q6NSZ9 544 aa10.16□□□□□ -0.78
CTNND1-219ENST00000528621 ZNF771Q7L3S4 317 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-219ENST00000528621 IFT57Q9NWB7 429 aa10.16□□□□□ -0.78
CTNND1-219ENST00000528621 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
CTNND1-219ENST00000528621 PCF11O94913 1555 aaKnown RBP10.16□□□□□ -0.78
CTNND1-219ENST00000528621 NESP48681 1621 aa10.16□□□□□ -0.78
CTNND1-219ENST00000528621 CABP4P57796 275 aa10.15□□□□□ -0.78
CTNND1-219ENST00000528621 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
CTNND1-219ENST00000528621 RUFY1Q96T51 708 aa10.15□□□□□ -0.78
CTNND1-219ENST00000528621 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.78
CTNND1-219ENST00000528621 FAM135AQ9P2D6 1515 aa10.15□□□□□ -0.78
CTNND1-219ENST00000528621 CNNM1Q9NRU3 951 aa10.15□□□□□ -0.78
CTNND1-219ENST00000528621 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-219ENST00000528621 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-219ENST00000528621 TSPY26PQ9H489 355 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 CAMSAP2Q08AD1 1489 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 MYO6Q9UM54 1294 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 CT47A1Q5JQC4 288 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-219ENST00000528621 PDILTQ8N807 584 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-219ENST00000528621 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 TXLNAP40222 546 aa10.14□□□□□ -0.79
CTNND1-219ENST00000528621 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-219ENST00000528621 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
CTNND1-219ENST00000528621 MAGI1Q96QZ7 1491 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-219ENST00000528621 SMARCE1Q969G3 411 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 CDCA7LQ96GN5 454 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 ODF2Q5BJF6 829 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms