RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
CCDC90B-210ENST00000528149 HAP1P54257 671 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-210ENST00000528149 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
CCDC90B-210ENST00000528149 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
CCDC90B-210ENST00000528149 IFFO2Q5TF58 517 aa16.54■□□□□ 0.24
CCDC90B-210ENST00000528149 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
CCDC90B-210ENST00000528149 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
CCDC90B-210ENST00000528149 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
CCDC90B-210ENST00000528149 CAMTA1Q9Y6Y1 1673 aa16.52■□□□□ 0.23
CCDC90B-210ENST00000528149 MINK1Q8N4C8 1332 aaPredicted RBP16.51■□□□□ 0.23
CCDC90B-210ENST00000528149 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
CCDC90B-210ENST00000528149 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
CCDC90B-210ENST00000528149 CAMKK2Q96RR4 588 aa16.5■□□□□ 0.23
CCDC90B-210ENST00000528149 NUP188Q5SRE5 1749 aa16.5■□□□□ 0.23
CCDC90B-210ENST00000528149 RREB1Q92766 1687 aa16.5■□□□□ 0.23
CCDC90B-210ENST00000528149 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
CCDC90B-210ENST00000528149 FAM83GA6ND36 823 aa16.49■□□□□ 0.23
CCDC90B-210ENST00000528149 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
CCDC90B-210ENST00000528149 QRICH2Q9H0J4 1663 aa16.48■□□□□ 0.23
CCDC90B-210ENST00000528149 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
CCDC90B-210ENST00000528149 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
CCDC90B-210ENST00000528149 POGKQ9P215 609 aa16.47■□□□□ 0.23
CCDC90B-210ENST00000528149 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
CCDC90B-210ENST00000528149 UTRNP46939 3433 aa16.47■□□□□ 0.23
CCDC90B-210ENST00000528149 ZNF784Q8NCA9 323 aaPredicted RBP16.46■□□□□ 0.23
CCDC90B-210ENST00000528149 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
CCDC90B-210ENST00000528149 PARD3Q8TEW0 1356 aa16.46■□□□□ 0.23
CCDC90B-210ENST00000528149 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
CCDC90B-210ENST00000528149 TRIM37O94972 964 aa16.45■□□□□ 0.22
CCDC90B-210ENST00000528149 BTG4Q9NY30 223 aa16.45■□□□□ 0.22
CCDC90B-210ENST00000528149 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
CCDC90B-210ENST00000528149 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
CCDC90B-210ENST00000528149 SPATA31A5Q5VU36 1347 aa16.44■□□□□ 0.22
CCDC90B-210ENST00000528149 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
CCDC90B-210ENST00000528149 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-210ENST00000528149 SBNO1A3KN83 1393 aa16.43■□□□□ 0.22
CCDC90B-210ENST00000528149 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
CCDC90B-210ENST00000528149 SIRT1Q96EB6 747 aa16.43■□□□□ 0.22
CCDC90B-210ENST00000528149 APBA3O96018 575 aa16.42■□□□□ 0.22
CCDC90B-210ENST00000528149 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
CCDC90B-210ENST00000528149 ATP7BP35670 1465 aa16.42■□□□□ 0.22
CCDC90B-210ENST00000528149 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
CCDC90B-210ENST00000528149 PSME1Q06323 249 aa16.41■□□□□ 0.22
CCDC90B-210ENST00000528149 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
CCDC90B-210ENST00000528149 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
CCDC90B-210ENST00000528149 KCNQ2O43526 872 aa16.39■□□□□ 0.21
CCDC90B-210ENST00000528149 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
CCDC90B-210ENST00000528149 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
CCDC90B-210ENST00000528149 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
CCDC90B-210ENST00000528149 FAM196AQ6ZSG2 479 aa16.38■□□□□ 0.21
CCDC90B-210ENST00000528149 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
CCDC90B-210ENST00000528149 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
CCDC90B-210ENST00000528149 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-210ENST00000528149 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
CCDC90B-210ENST00000528149 CENPJQ9HC77 1338 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-210ENST00000528149 CEP350Q5VT06 3117 aa16.35■□□□□ 0.21
CCDC90B-210ENST00000528149 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
CCDC90B-210ENST00000528149 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
CCDC90B-210ENST00000528149 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
CCDC90B-210ENST00000528149 CRYBG1Q9Y4K1 1723 aa16.34■□□□□ 0.21
CCDC90B-210ENST00000528149 CABP2Q9NPB3 220 aa16.34■□□□□ 0.21
CCDC90B-210ENST00000528149 MYOM1P52179 1685 aa16.34■□□□□ 0.21
CCDC90B-210ENST00000528149 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
CCDC90B-210ENST00000528149 USP47Q96K76 1375 aa16.33■□□□□ 0.2
CCDC90B-210ENST00000528149 CASZ1Q86V15 1759 aa16.33■□□□□ 0.2
CCDC90B-210ENST00000528149 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-210ENST00000528149 ITSN1Q15811 1721 aa16.32■□□□□ 0.2
CCDC90B-210ENST00000528149 CHD4Q14839 1912 aa16.31■□□□□ 0.2
CCDC90B-210ENST00000528149 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-210ENST00000528149 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
CCDC90B-210ENST00000528149 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
CCDC90B-210ENST00000528149 SRPK2P78362 688 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-210ENST00000528149 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-210ENST00000528149 STRN4Q9NRL3 753 aa16.27■□□□□ 0.2
CCDC90B-210ENST00000528149 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
CCDC90B-210ENST00000528149 PDGFDQ9GZP0 370 aaPredicted RBP16.26■□□□□ 0.19
CCDC90B-210ENST00000528149 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
CCDC90B-210ENST00000528149 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
CCDC90B-210ENST00000528149 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-210ENST00000528149 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
CCDC90B-210ENST00000528149 KIAA0232Q92628 1395 aa16.25■□□□□ 0.19
CCDC90B-210ENST00000528149 ACEP12821 1306 aa16.24■□□□□ 0.19
CCDC90B-210ENST00000528149 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
CCDC90B-210ENST00000528149 PTGER2P43116 358 aa16.24■□□□□ 0.19
CCDC90B-210ENST00000528149 CHRNA2Q15822 529 aa16.24■□□□□ 0.19
CCDC90B-210ENST00000528149 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
CCDC90B-210ENST00000528149 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
CCDC90B-210ENST00000528149 TESK2Q96S53 571 aa16.23■□□□□ 0.19
CCDC90B-210ENST00000528149 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
CCDC90B-210ENST00000528149 HSPA5P11021 654 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 POLR3AO14802 1390 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
CCDC90B-210ENST00000528149 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
CCDC90B-210ENST00000528149 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
CCDC90B-210ENST00000528149 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC90B-210ENST00000528149 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
CCDC90B-210ENST00000528149 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms