RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
RBM39-243ENST00000528062 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
RBM39-243ENST00000528062 AKAP12Q02952 1782 aa17.2■□□□□ 0.34
RBM39-243ENST00000528062 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
RBM39-243ENST00000528062 CC2D1BQ5T0F9 858 aaKnown RBP17.19■□□□□ 0.34
RBM39-243ENST00000528062 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
RBM39-243ENST00000528062 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
RBM39-243ENST00000528062 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
RBM39-243ENST00000528062 ATF3P18847 181 aa17.18■□□□□ 0.34
RBM39-243ENST00000528062 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
RBM39-243ENST00000528062 SLC12A5Q9H2X9 1139 aa17.17■□□□□ 0.34
RBM39-243ENST00000528062 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
RBM39-243ENST00000528062 PANK3Q9H999 370 aa17.17■□□□□ 0.34
RBM39-243ENST00000528062 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
RBM39-243ENST00000528062 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
RBM39-243ENST00000528062 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
RBM39-243ENST00000528062 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
RBM39-243ENST00000528062 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
RBM39-243ENST00000528062 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
RBM39-243ENST00000528062 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
RBM39-243ENST00000528062 KIF1AQ12756 1690 aa17.15■□□□□ 0.34
RBM39-243ENST00000528062 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
RBM39-243ENST00000528062 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
RBM39-243ENST00000528062 PLIN1O60240 522 aa17.14■□□□□ 0.33
RBM39-243ENST00000528062 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
RBM39-243ENST00000528062 SLAIN2Q9P270 581 aa17.13■□□□□ 0.33
RBM39-243ENST00000528062 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
RBM39-243ENST00000528062 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
RBM39-243ENST00000528062 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
RBM39-243ENST00000528062 POLR3AO14802 1390 aaPredicted RBP17.12■□□□□ 0.33
RBM39-243ENST00000528062 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
RBM39-243ENST00000528062 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
RBM39-243ENST00000528062 NHSL1Q5SYE7 1610 aa17.12■□□□□ 0.33
RBM39-243ENST00000528062 PDE4AP27815 886 aa17.11■□□□□ 0.33
RBM39-243ENST00000528062 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
RBM39-243ENST00000528062 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
RBM39-243ENST00000528062 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
RBM39-243ENST00000528062 INSRP06213 1382 aa17.11■□□□□ 0.33
RBM39-243ENST00000528062 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
RBM39-243ENST00000528062 ANKRD36BQ8N2N9 1353 aa17.1■□□□□ 0.33
RBM39-243ENST00000528062 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
RBM39-243ENST00000528062 PHF8Q9UPP1 1060 aa17.1■□□□□ 0.33
RBM39-243ENST00000528062 ACEP12821 1306 aa17.1■□□□□ 0.33
RBM39-243ENST00000528062 SKAP1Q86WV1 359 aa17.09■□□□□ 0.33
RBM39-243ENST00000528062 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
RBM39-243ENST00000528062 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
RBM39-243ENST00000528062 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
RBM39-243ENST00000528062 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
RBM39-243ENST00000528062 USP6P35125 1406 aa17.07■□□□□ 0.32
RBM39-243ENST00000528062 PXDNQ92626 1479 aa17.07■□□□□ 0.32
RBM39-243ENST00000528062 MS4A1P11836 297 aa17.06■□□□□ 0.32
RBM39-243ENST00000528062 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
RBM39-243ENST00000528062 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
RBM39-243ENST00000528062 FOXO3O43524 673 aa17.06■□□□□ 0.32
RBM39-243ENST00000528062 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
RBM39-243ENST00000528062 UBAP1LF5GYI3 381 aa17.05■□□□□ 0.32
RBM39-243ENST00000528062 C20orf194Q5TEA3 1177 aa17.05■□□□□ 0.32
RBM39-243ENST00000528062 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
RBM39-243ENST00000528062 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
RBM39-243ENST00000528062 PIK3C2AO00443 1686 aa17.05■□□□□ 0.32
RBM39-243ENST00000528062 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
RBM39-243ENST00000528062 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
RBM39-243ENST00000528062 TOM1O60784 492 aa17.04■□□□□ 0.32
RBM39-243ENST00000528062 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
RBM39-243ENST00000528062 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
RBM39-243ENST00000528062 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.32
RBM39-243ENST00000528062 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
RBM39-243ENST00000528062 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
RBM39-243ENST00000528062 COL16A1Q07092 1604 aaPredicted RBP17.02■□□□□ 0.31
RBM39-243ENST00000528062 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
RBM39-243ENST00000528062 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
RBM39-243ENST00000528062 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
RBM39-243ENST00000528062 RTL5Q5HYW3 569 aaPredicted RBP17.01■□□□□ 0.31
RBM39-243ENST00000528062 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
RBM39-243ENST00000528062 USP54Q70EL1 1684 aa17■□□□□ 0.31
RBM39-243ENST00000528062 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
RBM39-243ENST00000528062 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
RBM39-243ENST00000528062 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
RBM39-243ENST00000528062 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
RBM39-243ENST00000528062 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
RBM39-243ENST00000528062 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
RBM39-243ENST00000528062 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
RBM39-243ENST00000528062 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
RBM39-243ENST00000528062 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
RBM39-243ENST00000528062 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
RBM39-243ENST00000528062 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
RBM39-243ENST00000528062 PSME1Q06323 249 aa16.97■□□□□ 0.31
RBM39-243ENST00000528062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.31
RBM39-243ENST00000528062 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
RBM39-243ENST00000528062 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
RBM39-243ENST00000528062 NME9Q86XW9 330 aa16.96■□□□□ 0.31
RBM39-243ENST00000528062 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
RBM39-243ENST00000528062 FYB1O15117 783 aa16.95■□□□□ 0.3
RBM39-243ENST00000528062 TNS3Q68CZ2 1445 aa16.95■□□□□ 0.3
RBM39-243ENST00000528062 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.33e-7■■□□□ 11.8
RBM39-243ENST00000528062 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
RBM39-243ENST00000528062 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
RBM39-243ENST00000528062 ABCA3Q99758 1704 aa16.94■□□□□ 0.3
RBM39-243ENST00000528062 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
RBM39-243ENST00000528062 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms