RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RGS12O14924 1447 aa47.1■■■■■ 5.13
SSSCA1-205ENST00000527920 PPIP5K1Q6PFW1 1433 aa47.09■■■■■ 5.13
SSSCA1-205ENST00000527920 TNKS1BP1Q9C0C2 1729 aaKnown RBP47.09■■■■■ 5.13
SSSCA1-205ENST00000527920 PAK3O75914 559 aaPredicted RBP47.08■■■■■ 5.13
SSSCA1-205ENST00000527920 CARD11Q9BXL7 1154 aa47.07■■■■■ 5.13
SSSCA1-205ENST00000527920 UNC5CLQ8IV45 518 aa47.06■■■■■ 5.12
SSSCA1-205ENST00000527920 SBNO2Q9Y2G9 1366 aa47.06■■■■■ 5.12
SSSCA1-205ENST00000527920 BRD4O60885 1362 aaPredicted RBP47.01■■■■■ 5.12
SSSCA1-205ENST00000527920 PLEKHG5O94827 1062 aa46.99■■■■■ 5.11
SSSCA1-205ENST00000527920 CRYBG1Q9Y4K1 1723 aa46.99■■■■■ 5.11
SSSCA1-205ENST00000527920 NWD2Q9ULI1 1742 aa46.97■■■■■ 5.11
SSSCA1-205ENST00000527920 CLSPNQ9HAW4 1339 aa46.97■■■■■ 5.11
SSSCA1-205ENST00000527920 GJD4Q96KN9 370 aaPredicted RBP46.96■■■■■ 5.11
SSSCA1-205ENST00000527920 FAM83GA6ND36 823 aa46.94■■■■■ 5.1
SSSCA1-205ENST00000527920 CABP1Q9NZU7 370 aa46.94■■■■■ 5.1
SSSCA1-205ENST00000527920 PLCH1Q4KWH8 1693 aa46.94■■■■■ 5.1
SSSCA1-205ENST00000527920 ATAD2Q6PL18 1390 aa46.9■■■■■ 5.1
SSSCA1-205ENST00000527920 USP6P35125 1406 aa46.88■■■■■ 5.1
SSSCA1-205ENST00000527920 VPS72Q15906 364 aa46.88■■■■■ 5.1
SSSCA1-205ENST00000527920 COL14A1Q05707 1796 aaKnown RBP46.87■■■■■ 5.09
SSSCA1-205ENST00000527920 UPF1Q92900 1129 aaKnown RBP eCLIP46.86■■■■■ 5.091e-7■■■■□ 23.9
SSSCA1-205ENST00000527920 PCGF6Q9BYE7 350 aa46.86■■■■■ 5.09
SSSCA1-205ENST00000527920 ABTB2Q8N961 1025 aa46.84■■■■■ 5.09
SSSCA1-205ENST00000527920 TIMELESSQ9UNS1 1208 aa46.84■■■■■ 5.09
SSSCA1-205ENST00000527920 GLI3P10071 1580 aa46.84■■■■■ 5.09
SSSCA1-205ENST00000527920 PHRF1Q9P1Y6 1649 aaKnown RBP46.83■■■■■ 5.09
SSSCA1-205ENST00000527920 USP19O94966 1318 aa46.82■■■■■ 5.09
SSSCA1-205ENST00000527920 SSH2Q76I76 1423 aa46.8■■■■■ 5.08
SSSCA1-205ENST00000527920 NUTM2GQ5VZR2 741 aa46.79■■■■■ 5.08
SSSCA1-205ENST00000527920 PRDM11Q9NQV5 511 aa46.79■■■■■ 5.08
SSSCA1-205ENST00000527920 ZNF692Q9BU19 519 aaPredicted RBP46.78■■■■■ 5.08
SSSCA1-205ENST00000527920 BTG4Q9NY30 223 aa46.78■■■■■ 5.08
SSSCA1-205ENST00000527920 NRAPQ86VF7 1730 aa46.78■■■■■ 5.08
SSSCA1-205ENST00000527920 NLRP13Q86W25 1043 aa46.77■■■■■ 5.08
SSSCA1-205ENST00000527920 KIAA0232Q92628 1395 aa46.76■■■■■ 5.08
SSSCA1-205ENST00000527920 NRKQ7Z2Y5 1582 aa46.73■■■■■ 5.07
SSSCA1-205ENST00000527920 CPSF1Q10570 1443 aaKnown RBP46.73■■■■■ 5.07
SSSCA1-205ENST00000527920 PUS7Q96PZ0 661 aaKnown RBP46.72■■■■■ 5.07
SSSCA1-205ENST00000527920 CPDO75976 1380 aa46.71■■■■■ 5.07
SSSCA1-205ENST00000527920 SLC24A1O60721 1099 aa46.7■■■■■ 5.07
SSSCA1-205ENST00000527920 ONECUT3O60422 494 aaPredicted RBP46.69■■■■■ 5.06
SSSCA1-205ENST00000527920 CCDC9Q9Y3X0 531 aaKnown RBP46.68■■■■■ 5.06
SSSCA1-205ENST00000527920 ZC3H6P61129 1189 aaKnown RBP46.67■■■■■ 5.06
SSSCA1-205ENST00000527920 AKAP12Q02952 1782 aa46.67■■■■■ 5.06
SSSCA1-205ENST00000527920 TESK2Q96S53 571 aa46.66■■■■■ 5.06
SSSCA1-205ENST00000527920 ST20-MTHFSA0A0A6YYL1 179 aa46.64■■■■■ 5.06
SSSCA1-205ENST00000527920 GCP02774 474 aa46.64■■■■■ 5.06
SSSCA1-205ENST00000527920 TTC21BQ7Z4L5 1316 aa46.63■■■■■ 5.06
SSSCA1-205ENST00000527920 TTC21AQ8NDW8 1320 aa46.63■■■■■ 5.06
SSSCA1-205ENST00000527920 NLRP6P59044 892 aa46.62■■■■■ 5.05
SSSCA1-205ENST00000527920 SLIT3O75094 1523 aa46.61■■■■■ 5.05
SSSCA1-205ENST00000527920 CHRNA2Q15822 529 aa46.61■■■■■ 5.05
SSSCA1-205ENST00000527920 PIK3C2AO00443 1686 aa46.61■■■■■ 5.05
SSSCA1-205ENST00000527920 KTN1Q86UP2 1357 aaKnown RBP46.6■■■■■ 5.05
SSSCA1-205ENST00000527920 SPATA31A5Q5VU36 1347 aa46.59■■■■■ 5.05
SSSCA1-205ENST00000527920 SPATA31A7Q8IWB4 1347 aa46.59■■■■■ 5.05
SSSCA1-205ENST00000527920 SEPT12Q8IYM1 358 aa46.59■■■■■ 5.05
SSSCA1-205ENST00000527920 USP47Q96K76 1375 aa46.57■■■■■ 5.05
SSSCA1-205ENST00000527920 CD163L1Q9NR16 1453 aa46.56■■■■■ 5.04
SSSCA1-205ENST00000527920 MON2Q7Z3U7 1717 aa46.54■■■■■ 5.04
SSSCA1-205ENST00000527920 LMO7Q8WWI1 1683 aa46.53■■■■■ 5.04
SSSCA1-205ENST00000527920 NINLQ9Y2I6 1382 aa46.53■■■■■ 5.04
SSSCA1-205ENST00000527920 TMC1Q8TDI8 760 aa46.5■■■■■ 5.03
SSSCA1-205ENST00000527920 CAMTA1Q9Y6Y1 1673 aa46.49■■■■■ 5.03
SSSCA1-205ENST00000527920 HDGFL2Q7Z4V5 671 aaPredicted RBP46.49■■■■■ 5.03
SSSCA1-205ENST00000527920 EP400Q96L91 3159 aa46.48■■■■■ 5.03
SSSCA1-205ENST00000527920 FAM98CQ17RN3 349 aaKnown RBP46.48■■■■■ 5.03
SSSCA1-205ENST00000527920 SLC12A5Q9H2X9 1139 aa46.48■■■■■ 5.03
SSSCA1-205ENST00000527920 CCER1Q8TC90 406 aaPredicted RBP46.47■■■■■ 5.03
SSSCA1-205ENST00000527920 TERF2IPQ9NYB0 399 aa46.47■■■■■ 5.03
SSSCA1-205ENST00000527920 SPATA31A1Q5TZJ5 1347 aa46.47■■■■■ 5.03
SSSCA1-205ENST00000527920 BRWD3Q6RI45 1802 aa46.45■■■■■ 5.03
SSSCA1-205ENST00000527920 CCDC125Q86Z20 511 aa46.45■■■■■ 5.03
SSSCA1-205ENST00000527920 STRN4Q9NRL3 753 aa46.45■■■■■ 5.03
SSSCA1-205ENST00000527920 AATKQ6ZMQ8 1374 aa46.45■■■■■ 5.03
SSSCA1-205ENST00000527920 KCNH5Q8NCM2 988 aa46.44■■■■■ 5.02
SSSCA1-205ENST00000527920 EDC4Q6P2E9 1401 aaKnown RBP46.43■■■■■ 5.02
SSSCA1-205ENST00000527920 EVA1CP58658 441 aa46.42■■■■■ 5.02
SSSCA1-205ENST00000527920 KRT27Q7Z3Y8 459 aa46.42■■■■■ 5.02
SSSCA1-205ENST00000527920 USP31Q70CQ4 1352 aa46.42■■■■■ 5.02
SSSCA1-205ENST00000527920 A0A1W2PP64 1363 aa46.41■■■■■ 5.02
SSSCA1-205ENST00000527920 THSD7AQ9UPZ6 1657 aa46.39■■■■■ 5.02
SSSCA1-205ENST00000527920 TMF1P82094 1093 aa46.39■■■■■ 5.02
SSSCA1-205ENST00000527920 COL5A2P05997 1499 aaPredicted RBP46.38■■■■■ 5.02
SSSCA1-205ENST00000527920 A0A0G2JS52 829 aa46.38■■■■■ 5.02
SSSCA1-205ENST00000527920 MYT1Q01538 1121 aa46.38■■■■■ 5.02
SSSCA1-205ENST00000527920 USP54Q70EL1 1684 aa46.36■■■■■ 5.01
SSSCA1-205ENST00000527920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP46.35■■■■■ 5.01
SSSCA1-205ENST00000527920 ARHGEF25Q86VW2 580 aa46.34■■■■■ 5.01
SSSCA1-205ENST00000527920 NFAT5O94916 1531 aa46.33■■■■■ 5.01
SSSCA1-205ENST00000527920 LARP1Q6PKG0 1096 aaKnown RBP46.33■■■■■ 5.01
SSSCA1-205ENST00000527920 BARGINQ6ZT62 677 aa46.33■■■■■ 5.01
SSSCA1-205ENST00000527920 BLMP54132 1417 aaPredicted RBP46.32■■■■■ 5.01
SSSCA1-205ENST00000527920 CDCA8Q53HL2 280 aa46.3■■■■■ 5
SSSCA1-205ENST00000527920 NME9Q86XW9 330 aa46.29■■■■■ 5
SSSCA1-205ENST00000527920 COL18A1P39060 1754 aa46.29■■■■■ 5
SSSCA1-205ENST00000527920 THRAP3Q9Y2W1 955 aaKnown RBP46.28■■■■■ 5
SSSCA1-205ENST00000527920 ZBTB7CA1YPR0 619 aa46.27■■■■■ 5
SSSCA1-205ENST00000527920 TCP11L2Q8N4U5 519 aa46.27■■■■■ 5
SSSCA1-205ENST00000527920 ABCC6O95255 1503 aa46.27■■■■■ 5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms