RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 PMFBP1Q8TBY8 1022 aa24.42■■□□□ 1.5
CHMP4A-203ENST00000527154 ACIN1Q9UKV3 1341 aaKnown RBP24.41■■□□□ 1.5
CHMP4A-203ENST00000527154 RREB1Q92766 1687 aa24.4■■□□□ 1.5
CHMP4A-203ENST00000527154 SPATA31A1Q5TZJ5 1347 aa24.4■■□□□ 1.5
CHMP4A-203ENST00000527154 PLEKHG5O94827 1062 aa24.4■■□□□ 1.5
CHMP4A-203ENST00000527154 CFAP70Q5T0N1 1121 aa24.4■■□□□ 1.5
CHMP4A-203ENST00000527154 PRR36Q9H6K5 1346 aa24.39■■□□□ 1.5
CHMP4A-203ENST00000527154 FAM196AQ6ZSG2 479 aa24.39■■□□□ 1.49
CHMP4A-203ENST00000527154 ADGRB1O14514 1584 aa24.38■■□□□ 1.49
CHMP4A-203ENST00000527154 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
CHMP4A-203ENST00000527154 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
CHMP4A-203ENST00000527154 MPHOSPH9Q99550 1183 aa24.37■■□□□ 1.49
CHMP4A-203ENST00000527154 YY1P25490 414 aa24.35■■□□□ 1.49
CHMP4A-203ENST00000527154 EIF3AQ14152 1382 aaKnown RBP24.34■■□□□ 1.49
CHMP4A-203ENST00000527154 TRIM37O94972 964 aa24.34■■□□□ 1.49
CHMP4A-203ENST00000527154 SAFB2Q14151 953 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHMP4A-203ENST00000527154 NUP188Q5SRE5 1749 aa24.34■■□□□ 1.49
CHMP4A-203ENST00000527154 PRDM11Q9NQV5 511 aa24.33■■□□□ 1.49
CHMP4A-203ENST00000527154 BARGINQ6ZT62 677 aa24.32■■□□□ 1.48
CHMP4A-203ENST00000527154 KIAA0232Q92628 1395 aa24.3■■□□□ 1.48
CHMP4A-203ENST00000527154 APBA3O96018 575 aa24.3■■□□□ 1.48
CHMP4A-203ENST00000527154 POGKQ9P215 609 aa24.29■■□□□ 1.48
CHMP4A-203ENST00000527154 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
CHMP4A-203ENST00000527154 WASLO00401 505 aaPredicted RBP24.27■■□□□ 1.48
CHMP4A-203ENST00000527154 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
CHMP4A-203ENST00000527154 SSH2Q76I76 1423 aa24.26■■□□□ 1.47
CHMP4A-203ENST00000527154 ATP7BP35670 1465 aa24.26■■□□□ 1.47
CHMP4A-203ENST00000527154 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
CHMP4A-203ENST00000527154 CHRNA2Q15822 529 aa24.22■■□□□ 1.47
CHMP4A-203ENST00000527154 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
CHMP4A-203ENST00000527154 NBPF14Q5TI25 921 aa24.22■■□□□ 1.47
CHMP4A-203ENST00000527154 SPON1Q9HCB6 807 aa24.22■■□□□ 1.47
CHMP4A-203ENST00000527154 LMO7Q8WWI1 1683 aa24.21■■□□□ 1.47
CHMP4A-203ENST00000527154 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
CHMP4A-203ENST00000527154 KCNQ2O43526 872 aa24.21■■□□□ 1.47
CHMP4A-203ENST00000527154 NGDNQ8NEJ9 315 aaKnown RBP24.21■■□□□ 1.47
CHMP4A-203ENST00000527154 CAMTA1Q9Y6Y1 1673 aa24.21■■□□□ 1.47
CHMP4A-203ENST00000527154 CPDO75976 1380 aa24.2■■□□□ 1.46
CHMP4A-203ENST00000527154 TRAK1Q9UPV9 953 aa24.2■■□□□ 1.46
CHMP4A-203ENST00000527154 RGPD3A6NKT7 1758 aaPredicted RBP24.19■■□□□ 1.46
CHMP4A-203ENST00000527154 RGPD4Q7Z3J3 1758 aa24.19■■□□□ 1.46
CHMP4A-203ENST00000527154 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
CHMP4A-203ENST00000527154 STRN4Q9NRL3 753 aa24.19■■□□□ 1.46
CHMP4A-203ENST00000527154 NRKQ7Z2Y5 1582 aa24.18■■□□□ 1.46
CHMP4A-203ENST00000527154 PAK3O75914 559 aaPredicted RBP24.18■■□□□ 1.46
CHMP4A-203ENST00000527154 PDE3BQ13370 1112 aa24.18■■□□□ 1.46
CHMP4A-203ENST00000527154 THRAP3Q9Y2W1 955 aaKnown RBP24.17■■□□□ 1.46
CHMP4A-203ENST00000527154 ITSN1Q15811 1721 aa24.17■■□□□ 1.46
CHMP4A-203ENST00000527154 UTRNP46939 3433 aa24.17■■□□□ 1.46
CHMP4A-203ENST00000527154 PEAK1Q9H792 1746 aa24.16■■□□□ 1.46
CHMP4A-203ENST00000527154 PARP4Q9UKK3 1724 aaKnown RBP24.16■■□□□ 1.46
CHMP4A-203ENST00000527154 C11orf95C9JLR9 678 aaPredicted RBP24.16■■□□□ 1.46
CHMP4A-203ENST00000527154 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
CHMP4A-203ENST00000527154 USP19O94966 1318 aa24.15■■□□□ 1.46
CHMP4A-203ENST00000527154 ZC3H6P61129 1189 aaKnown RBP24.15■■□□□ 1.46
CHMP4A-203ENST00000527154 CASZ1Q86V15 1759 aa24.14■■□□□ 1.46
CHMP4A-203ENST00000527154 LARP1Q6PKG0 1096 aaKnown RBP24.14■■□□□ 1.45
CHMP4A-203ENST00000527154 NUDT16Q96DE0 195 aaKnown RBP24.14■■□□□ 1.45
CHMP4A-203ENST00000527154 PLSCR1O15162 318 aa24.13■■□□□ 1.45
CHMP4A-203ENST00000527154 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
CHMP4A-203ENST00000527154 TOPAZ1Q8N9V7 1692 aa24.12■■□□□ 1.45
CHMP4A-203ENST00000527154 PPP1R1BQ9UD71 204 aaPredicted RBP24.11■■□□□ 1.45
CHMP4A-203ENST00000527154 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
CHMP4A-203ENST00000527154 COL5A2P05997 1499 aaPredicted RBP24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 PLEKHG3A1L390 1219 aa24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 STAC3Q96MF2 364 aa24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 OVOS2A0A0G2JMS6 1433 aa24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 OVOS2A0A0J9YW53 1432 aa24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 OVOS2Q6IE36 1432 aa24.09■■□□□ 1.45
CHMP4A-203ENST00000527154 EVA1CP58658 441 aa24.08■■□□□ 1.45
CHMP4A-203ENST00000527154 ANO8Q9HCE9 1232 aaPredicted RBP24.08■■□□□ 1.45
CHMP4A-203ENST00000527154 BCL9O00512 1426 aa24.08■■□□□ 1.44
CHMP4A-203ENST00000527154 DCAF8L1A6NGE4 600 aa24.07■■□□□ 1.44
CHMP4A-203ENST00000527154 ACEP12821 1306 aa24.07■■□□□ 1.44
CHMP4A-203ENST00000527154 CCDC61Q9Y6R9 512 aa24.05■■□□□ 1.44
CHMP4A-203ENST00000527154 CRB1P82279 1406 aa24.04■■□□□ 1.44
CHMP4A-203ENST00000527154 PTGER2P43116 358 aa24.04■■□□□ 1.44
CHMP4A-203ENST00000527154 NUTM2GQ5VZR2 741 aa24.04■■□□□ 1.44
CHMP4A-203ENST00000527154 ZNF784Q8NCA9 323 aaPredicted RBP24.04■■□□□ 1.44
CHMP4A-203ENST00000527154 SBF2Q86WG5 1849 aa24.04■■□□□ 1.44
CHMP4A-203ENST00000527154 PROM2Q8N271 834 aa24.03■■□□□ 1.44
CHMP4A-203ENST00000527154 LRRC37A3O60309 1634 aa24.02■■□□□ 1.44
CHMP4A-203ENST00000527154 GCP02774 474 aa24.02■■□□□ 1.44
CHMP4A-203ENST00000527154 CDK19Q9BWU1 502 aa24.02■■□□□ 1.44
CHMP4A-203ENST00000527154 PDGFDQ9GZP0 370 aaPredicted RBP24.01■■□□□ 1.43
CHMP4A-203ENST00000527154 ABTB2Q8N961 1025 aa24■■□□□ 1.43
CHMP4A-203ENST00000527154 BCL11BQ9C0K0 894 aaPredicted RBP24■■□□□ 1.43
CHMP4A-203ENST00000527154 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
CHMP4A-203ENST00000527154 MYOM1P52179 1685 aa23.99■■□□□ 1.43
CHMP4A-203ENST00000527154 PTF1AQ7RTS3 328 aa23.98■■□□□ 1.43
CHMP4A-203ENST00000527154 AATKQ6ZMQ8 1374 aa23.98■■□□□ 1.43
CHMP4A-203ENST00000527154 NLRP13Q86W25 1043 aa23.97■■□□□ 1.43
CHMP4A-203ENST00000527154 DCAF11Q8TEB1 546 aa23.97■■□□□ 1.43
CHMP4A-203ENST00000527154 SGIP1Q9BQI5 828 aa23.97■■□□□ 1.43
CHMP4A-203ENST00000527154 SLIT3O75094 1523 aa23.96■■□□□ 1.43
CHMP4A-203ENST00000527154 KDM2AQ9Y2K7 1162 aa23.94■■□□□ 1.42
CHMP4A-203ENST00000527154 COL18A1P39060 1754 aa23.93■■□□□ 1.42
CHMP4A-203ENST00000527154 DDB1Q16531 1140 aa23.93■■□□□ 1.42
CHMP4A-203ENST00000527154 SYT17Q9BSW7 474 aa23.92■■□□□ 1.42
CHMP4A-203ENST00000527154 ZBTB7AO95365 584 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms