RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-208ENST00000527025 SPATA31A3Q5VYP0 1347 aa12.68□□□□□ -0.38
CCDC90B-208ENST00000527025 TOPAZ1Q8N9V7 1692 aa12.68□□□□□ -0.38
CCDC90B-208ENST00000527025 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
CCDC90B-208ENST00000527025 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
CCDC90B-208ENST00000527025 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
CCDC90B-208ENST00000527025 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
CCDC90B-208ENST00000527025 PSME1Q06323 249 aa12.66□□□□□ -0.38
CCDC90B-208ENST00000527025 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
CCDC90B-208ENST00000527025 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
CCDC90B-208ENST00000527025 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
CCDC90B-208ENST00000527025 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
CCDC90B-208ENST00000527025 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
CCDC90B-208ENST00000527025 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
CCDC90B-208ENST00000527025 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
CCDC90B-208ENST00000527025 ACEP12821 1306 aa12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 TNS3Q68CZ2 1445 aa12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 MEX3CQ5U5Q3 659 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 CCER1Q8TC90 406 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-208ENST00000527025 AFF2P51816 1311 aa12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
CCDC90B-208ENST00000527025 TESK2Q96S53 571 aa12.61□□□□□ -0.39
CCDC90B-208ENST00000527025 CRYBG1Q9Y4K1 1723 aa12.6□□□□□ -0.39
CCDC90B-208ENST00000527025 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
CCDC90B-208ENST00000527025 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
CCDC90B-208ENST00000527025 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
CCDC90B-208ENST00000527025 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 NGLY1Q96IV0 654 aa12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 TIMELESSQ9UNS1 1208 aa12.59□□□□□ -0.39
CCDC90B-208ENST00000527025 SBNO2Q9Y2G9 1366 aa12.58□□□□□ -0.4
CCDC90B-208ENST00000527025 SOCS7O14512 581 aa12.58□□□□□ -0.4
CCDC90B-208ENST00000527025 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-208ENST00000527025 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
CCDC90B-208ENST00000527025 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
CCDC90B-208ENST00000527025 HAX1O00165 279 aa12.57□□□□□ -0.4
CCDC90B-208ENST00000527025 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-208ENST00000527025 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
CCDC90B-208ENST00000527025 EVX2Q03828 476 aa12.55□□□□□ -0.4
CCDC90B-208ENST00000527025 USP21Q9UK80 565 aa12.55□□□□□ -0.4
CCDC90B-208ENST00000527025 USP47Q96K76 1375 aa12.55□□□□□ -0.4
CCDC90B-208ENST00000527025 USP6P35125 1406 aa12.54□□□□□ -0.4
CCDC90B-208ENST00000527025 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-208ENST00000527025 SLIT2O94813 1529 aa12.54□□□□□ -0.4
CCDC90B-208ENST00000527025 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
CCDC90B-208ENST00000527025 PHRF1Q9P1Y6 1649 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-208ENST00000527025 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
CCDC90B-208ENST00000527025 ATRNO75882 1429 aa12.53□□□□□ -0.4
CCDC90B-208ENST00000527025 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
CCDC90B-208ENST00000527025 RXRBP28702 533 aa12.52□□□□□ -0.41
CCDC90B-208ENST00000527025 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
CCDC90B-208ENST00000527025 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.41
CCDC90B-208ENST00000527025 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
CCDC90B-208ENST00000527025 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
CCDC90B-208ENST00000527025 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 UNC5CLQ8IV45 518 aa12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 USP19O94966 1318 aa12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 TTC21BQ7Z4L5 1316 aa12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 NRAPQ86VF7 1730 aa12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-208ENST00000527025 GLI3P10071 1580 aa12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 RGS12O14924 1447 aa12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 KIAA0232Q92628 1395 aa12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 ZC3H6P61129 1189 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 TMC1Q8TDI8 760 aa12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 TRPC5Q9UL62 973 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-208ENST00000527025 NWD2Q9ULI1 1742 aa12.48□□□□□ -0.41
CCDC90B-208ENST00000527025 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-208ENST00000527025 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-208ENST00000527025 BTG4Q9NY30 223 aa12.48□□□□□ -0.41
CCDC90B-208ENST00000527025 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-208ENST00000527025 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
CCDC90B-208ENST00000527025 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-208ENST00000527025 GCP02774 474 aa12.47□□□□□ -0.41
CCDC90B-208ENST00000527025 NLRP6P59044 892 aa12.47□□□□□ -0.41
CCDC90B-208ENST00000527025 GJD4Q96KN9 370 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-208ENST00000527025 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
CCDC90B-208ENST00000527025 NLRP13Q86W25 1043 aa12.46□□□□□ -0.41
CCDC90B-208ENST00000527025 NME9Q86XW9 330 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms