RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
CHMP1B-201ENST00000526991 SEC24BO95487 1268 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 HMOX1P09601 288 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 RARSP54136 660 aaKnown RBP15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 SETBP1Q9Y6X0 1596 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
CHMP1B-201ENST00000526991 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
CHMP1B-201ENST00000526991 RRS1Q15050 365 aaKnown RBP15.37■□□□□ 0.05
CHMP1B-201ENST00000526991 PCDHB15Q9Y5E8 787 aa15.37■□□□□ 0.05
CHMP1B-201ENST00000526991 ALKQ9UM73 1620 aa15.36■□□□□ 0.05
CHMP1B-201ENST00000526991 PTPRMP28827 1452 aa15.36■□□□□ 0.05
CHMP1B-201ENST00000526991 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
CHMP1B-201ENST00000526991 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
CHMP1B-201ENST00000526991 VSIG10Q8N0Z9 540 aa15.35■□□□□ 0.05
CHMP1B-201ENST00000526991 NEURL4Q96JN8 1562 aa15.35■□□□□ 0.05
CHMP1B-201ENST00000526991 PMFBP1Q8TBY8 1022 aa15.35■□□□□ 0.05
CHMP1B-201ENST00000526991 TNRQ92752 1358 aa15.34■□□□□ 0.05
CHMP1B-201ENST00000526991 PDE3AQ14432 1141 aa15.33■□□□□ 0.05
CHMP1B-201ENST00000526991 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.05
CHMP1B-201ENST00000526991 ZMYND15Q9H091 742 aa15.33■□□□□ 0.05
CHMP1B-201ENST00000526991 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.05
CHMP1B-201ENST00000526991 NFKBIBQ15653 356 aa15.33■□□□□ 0.04
CHMP1B-201ENST00000526991 THUMPD2Q9BTF0 503 aaKnown RBP15.33■□□□□ 0.04
CHMP1B-201ENST00000526991 NUDT16Q96DE0 195 aaKnown RBP15.32■□□□□ 0.04
CHMP1B-201ENST00000526991 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
CHMP1B-201ENST00000526991 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
CHMP1B-201ENST00000526991 MYO3AQ8NEV4 1616 aa15.32■□□□□ 0.04
CHMP1B-201ENST00000526991 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
CHMP1B-201ENST00000526991 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
CHMP1B-201ENST00000526991 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
CHMP1B-201ENST00000526991 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
CHMP1B-201ENST00000526991 SLKQ9H2G2 1235 aaPredicted RBP15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 ATAD2Q6PL18 1390 aa15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 PDIA4P13667 645 aaKnown RBP15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
CHMP1B-201ENST00000526991 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 WDR63Q8IWG1 891 aa15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 ZFYVE9O95405 1425 aa15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 ARHGEF40Q8TER5 1519 aa15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
CHMP1B-201ENST00000526991 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
CHMP1B-201ENST00000526991 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
CHMP1B-201ENST00000526991 RIPK4P57078 832 aa15.27■□□□□ 0.04
CHMP1B-201ENST00000526991 ITPRIPQ8IWB1 547 aa15.27■□□□□ 0.04
CHMP1B-201ENST00000526991 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.03
CHMP1B-201ENST00000526991 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.03
CHMP1B-201ENST00000526991 POLKQ9UBT6 870 aa15.27■□□□□ 0.03
CHMP1B-201ENST00000526991 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.03
CHMP1B-201ENST00000526991 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.03
CHMP1B-201ENST00000526991 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
CHMP1B-201ENST00000526991 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
CHMP1B-201ENST00000526991 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHMP1B-201ENST00000526991 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 PHACTR3Q96KR7 559 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 AMOTL2Q9Y2J4 779 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 TMEM2Q9UHN6 1383 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 AGLP35573 1532 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 ZKSCAN2Q63HK3 967 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 EID1Q9Y6B2 187 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 USP19O94966 1318 aa15.25■□□□□ 0.03
CHMP1B-201ENST00000526991 DZIP1LQ8IYY4 767 aaKnown RBP15.24■□□□□ 0.03
CHMP1B-201ENST00000526991 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
CHMP1B-201ENST00000526991 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
CHMP1B-201ENST00000526991 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
CHMP1B-201ENST00000526991 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
CHMP1B-201ENST00000526991 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
CHMP1B-201ENST00000526991 TRIM27P14373 513 aa15.23■□□□□ 0.03
CHMP1B-201ENST00000526991 HDGFP51858 240 aaKnown RBP15.23■□□□□ 0.03
CHMP1B-201ENST00000526991 SHPRHQ149N8 1683 aa15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 COG3Q96JB2 828 aa15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
CHMP1B-201ENST00000526991 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
CHMP1B-201ENST00000526991 ACEP12821 1306 aa15.21■□□□□ 0.03
CHMP1B-201ENST00000526991 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.03
CHMP1B-201ENST00000526991 ARXQ96QS3 562 aa15.2■□□□□ 0.02
CHMP1B-201ENST00000526991 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
CHMP1B-201ENST00000526991 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
CHMP1B-201ENST00000526991 CCDC27Q2M243 656 aa15.2■□□□□ 0.02
CHMP1B-201ENST00000526991 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
CHMP1B-201ENST00000526991 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
CHMP1B-201ENST00000526991 KCNA6P17658 529 aa15.19■□□□□ 0.02
CHMP1B-201ENST00000526991 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
CHMP1B-201ENST00000526991 GSE1Q14687 1217 aa15.19■□□□□ 0.02
CHMP1B-201ENST00000526991 C1orf115Q9H7X2 142 aa15.18■□□□□ 0.02
CHMP1B-201ENST00000526991 LTV1Q96GA3 475 aaPredicted RBP15.18■□□□□ 0.02
CHMP1B-201ENST00000526991 XPCQ01831 940 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms