RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 CAMKK2Q96RR4 588 aa16.18■□□□□ 0.18
CTSB-212ENST00000526645 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
CTSB-212ENST00000526645 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
CTSB-212ENST00000526645 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
CTSB-212ENST00000526645 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
CTSB-212ENST00000526645 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
CTSB-212ENST00000526645 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
CTSB-212ENST00000526645 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
CTSB-212ENST00000526645 PRDM11Q9NQV5 511 aa16.15■□□□□ 0.18
CTSB-212ENST00000526645 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
CTSB-212ENST00000526645 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
CTSB-212ENST00000526645 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
CTSB-212ENST00000526645 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
CTSB-212ENST00000526645 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
CTSB-212ENST00000526645 TRIM37O94972 964 aa16.13■□□□□ 0.17
CTSB-212ENST00000526645 APBA3O96018 575 aa16.12■□□□□ 0.17
CTSB-212ENST00000526645 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTSB-212ENST00000526645 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
CTSB-212ENST00000526645 NBPF14Q5TI25 921 aa16.12■□□□□ 0.17
CTSB-212ENST00000526645 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
CTSB-212ENST00000526645 POGKQ9P215 609 aa16.12■□□□□ 0.17
CTSB-212ENST00000526645 ITSN1Q15811 1721 aa16.11■□□□□ 0.17
CTSB-212ENST00000526645 ATP7BP35670 1465 aa16.1■□□□□ 0.17
CTSB-212ENST00000526645 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
CTSB-212ENST00000526645 ADGRB1O14514 1584 aa16.09■□□□□ 0.17
CTSB-212ENST00000526645 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
CTSB-212ENST00000526645 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
CTSB-212ENST00000526645 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
CTSB-212ENST00000526645 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.17
CTSB-212ENST00000526645 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.17
CTSB-212ENST00000526645 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
CTSB-212ENST00000526645 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
CTSB-212ENST00000526645 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
CTSB-212ENST00000526645 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
CTSB-212ENST00000526645 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
CTSB-212ENST00000526645 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
CTSB-212ENST00000526645 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
CTSB-212ENST00000526645 KCNQ2O43526 872 aa16.06■□□□□ 0.16
CTSB-212ENST00000526645 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
CTSB-212ENST00000526645 STRN4Q9NRL3 753 aa16.05■□□□□ 0.16
CTSB-212ENST00000526645 PARP4Q9UKK3 1724 aaKnown RBP16.05■□□□□ 0.16
CTSB-212ENST00000526645 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
CTSB-212ENST00000526645 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
CTSB-212ENST00000526645 MINK1Q8N4C8 1332 aaPredicted RBP16.03■□□□□ 0.16
CTSB-212ENST00000526645 LMO7Q8WWI1 1683 aa16.03■□□□□ 0.16
CTSB-212ENST00000526645 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
CTSB-212ENST00000526645 CHRNA2Q15822 529 aa16.02■□□□□ 0.16
CTSB-212ENST00000526645 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.16
CTSB-212ENST00000526645 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
CTSB-212ENST00000526645 TRAK1Q9UPV9 953 aa16.01■□□□□ 0.15
CTSB-212ENST00000526645 CPDO75976 1380 aa16■□□□□ 0.15
CTSB-212ENST00000526645 CASZ1Q86V15 1759 aa16■□□□□ 0.15
CTSB-212ENST00000526645 CAMTA1Q9Y6Y1 1673 aa16■□□□□ 0.15
CTSB-212ENST00000526645 EVA1CP58658 441 aa16■□□□□ 0.15
CTSB-212ENST00000526645 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
CTSB-212ENST00000526645 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
CTSB-212ENST00000526645 OVOS2A0A0J9YW53 1432 aa16■□□□□ 0.15
CTSB-212ENST00000526645 OVOS2Q6IE36 1432 aa16■□□□□ 0.15
CTSB-212ENST00000526645 TOPAZ1Q8N9V7 1692 aa15.99■□□□□ 0.15
CTSB-212ENST00000526645 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
CTSB-212ENST00000526645 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
CTSB-212ENST00000526645 PEAK1Q9H792 1746 aa15.99■□□□□ 0.15
CTSB-212ENST00000526645 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
CTSB-212ENST00000526645 PLSCR1O15162 318 aa15.96■□□□□ 0.15
CTSB-212ENST00000526645 LARP1Q6PKG0 1096 aaKnown RBP15.96■□□□□ 0.15
CTSB-212ENST00000526645 COL5A2P05997 1499 aaPredicted RBP15.96■□□□□ 0.14
CTSB-212ENST00000526645 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
CTSB-212ENST00000526645 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
CTSB-212ENST00000526645 MYOM1P52179 1685 aa15.95■□□□□ 0.14
CTSB-212ENST00000526645 USP19O94966 1318 aa15.94■□□□□ 0.14
CTSB-212ENST00000526645 CRB1P82279 1406 aa15.94■□□□□ 0.14
CTSB-212ENST00000526645 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
CTSB-212ENST00000526645 STAC3Q96MF2 364 aa15.94■□□□□ 0.14
CTSB-212ENST00000526645 ZNF784Q8NCA9 323 aaPredicted RBP15.93■□□□□ 0.14
CTSB-212ENST00000526645 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
CTSB-212ENST00000526645 ABTB2Q8N961 1025 aa15.91■□□□□ 0.14
CTSB-212ENST00000526645 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
CTSB-212ENST00000526645 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
CTSB-212ENST00000526645 ACEP12821 1306 aa15.91■□□□□ 0.14
CTSB-212ENST00000526645 BRD4O60885 1362 aaPredicted RBP15.9■□□□□ 0.14
CTSB-212ENST00000526645 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
CTSB-212ENST00000526645 BCL9O00512 1426 aa15.9■□□□□ 0.14
CTSB-212ENST00000526645 PLEKHG3A1L390 1219 aa15.89■□□□□ 0.13
CTSB-212ENST00000526645 NLRP13Q86W25 1043 aa15.89■□□□□ 0.13
CTSB-212ENST00000526645 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
CTSB-212ENST00000526645 CHD4Q14839 1912 aa15.89■□□□□ 0.13
CTSB-212ENST00000526645 AKAP12Q02952 1782 aa15.89■□□□□ 0.13
CTSB-212ENST00000526645 SENP3-EIF4A1A0A087X0R7 540 aa15.88■□□□□ 0.13
CTSB-212ENST00000526645 DDB1Q16531 1140 aa15.88■□□□□ 0.13
CTSB-212ENST00000526645 GCP02774 474 aa15.87■□□□□ 0.13
CTSB-212ENST00000526645 PTGER2P43116 358 aa15.87■□□□□ 0.13
CTSB-212ENST00000526645 CDK19Q9BWU1 502 aa15.87■□□□□ 0.13
CTSB-212ENST00000526645 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
CTSB-212ENST00000526645 SLIT3O75094 1523 aa15.86■□□□□ 0.13
CTSB-212ENST00000526645 DCAF11Q8TEB1 546 aa15.86■□□□□ 0.13
CTSB-212ENST00000526645 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
CTSB-212ENST00000526645 ZBTB7AO95365 584 aa15.85■□□□□ 0.13
CTSB-212ENST00000526645 C1QTNF8P60827 252 aa15.85■□□□□ 0.13
CTSB-212ENST00000526645 STK32BQ9NY57 414 aa15.85■□□□□ 0.13
CTSB-212ENST00000526645 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms