RNA–Protein interactions for RNA: ENST00000526463.5

CCDC84-203, Transcript of coiled-coil domain containing 84, humanhuman

TSL 1 (best)

Gene CCDC84, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-203ENST00000526463 USP21Q9UK80 565 aa29.36■■■□□ 2.29
CCDC84-203ENST00000526463 PLEKHG5O94827 1062 aa29.35■■■□□ 2.29
CCDC84-203ENST00000526463 RXRBP28702 533 aa29.35■■■□□ 2.29
CCDC84-203ENST00000526463 CCER1Q8TC90 406 aaPredicted RBP29.35■■■□□ 2.29
CCDC84-203ENST00000526463 QTRT2Q9H974 415 aaKnown RBP29.34■■■□□ 2.29
CCDC84-203ENST00000526463 PLCH1Q4KWH8 1693 aa29.33■■■□□ 2.29
CCDC84-203ENST00000526463 AKAP12Q02952 1782 aa29.31■■■□□ 2.28
CCDC84-203ENST00000526463 NWD2Q9ULI1 1742 aa29.31■■■□□ 2.28
CCDC84-203ENST00000526463 CDK12Q9NYV4 1490 aaPredicted RBP29.31■■■□□ 2.28
CCDC84-203ENST00000526463 ATAD2Q6PL18 1390 aa29.31■■■□□ 2.28
CCDC84-203ENST00000526463 CABP1Q9NZU7 370 aa29.31■■■□□ 2.28
CCDC84-203ENST00000526463 PHRF1Q9P1Y6 1649 aaKnown RBP29.31■■■□□ 2.28
CCDC84-203ENST00000526463 SLIT2O94813 1529 aa29.3■■■□□ 2.28
CCDC84-203ENST00000526463 BCL9LQ86UU0 1499 aa29.3■■■□□ 2.28
CCDC84-203ENST00000526463 TRPC5Q9UL62 973 aaPredicted RBP29.3■■■□□ 2.28
CCDC84-203ENST00000526463 BRD4O60885 1362 aaPredicted RBP29.29■■■□□ 2.28
CCDC84-203ENST00000526463 RBM6P78332 1123 aaKnown RBP29.29■■■□□ 2.28
CCDC84-203ENST00000526463 ATRNO75882 1429 aa29.28■■■□□ 2.28
CCDC84-203ENST00000526463 USP6P35125 1406 aa29.27■■■□□ 2.28
CCDC84-203ENST00000526463 COL14A1Q05707 1796 aaKnown RBP29.26■■■□□ 2.27
CCDC84-203ENST00000526463 ST20-MTHFSA0A0A6YYL1 179 aa29.23■■■□□ 2.27
CCDC84-203ENST00000526463 ABTB2Q8N961 1025 aa29.23■■■□□ 2.27
CCDC84-203ENST00000526463 UNC5CLQ8IV45 518 aa29.22■■■□□ 2.27
CCDC84-203ENST00000526463 USP47Q96K76 1375 aa29.22■■■□□ 2.27
CCDC84-203ENST00000526463 MON2Q7Z3U7 1717 aa29.21■■■□□ 2.27
CCDC84-203ENST00000526463 NUTM2GQ5VZR2 741 aa29.21■■■□□ 2.27
CCDC84-203ENST00000526463 RGS12O14924 1447 aa29.2■■■□□ 2.27
CCDC84-203ENST00000526463 SLC24A1O60721 1099 aa29.2■■■□□ 2.26
CCDC84-203ENST00000526463 NRAPQ86VF7 1730 aa29.2■■■□□ 2.26
CCDC84-203ENST00000526463 NRKQ7Z2Y5 1582 aa29.19■■■□□ 2.26
CCDC84-203ENST00000526463 FAM83GA6ND36 823 aa29.19■■■□□ 2.26
CCDC84-203ENST00000526463 TESK2Q96S53 571 aa29.19■■■□□ 2.26
CCDC84-203ENST00000526463 ZNF692Q9BU19 519 aaPredicted RBP29.19■■■□□ 2.26
CCDC84-203ENST00000526463 CPSF1Q10570 1443 aaKnown RBP29.18■■■□□ 2.26
CCDC84-203ENST00000526463 SSH2Q76I76 1423 aa29.18■■■□□ 2.26
CCDC84-203ENST00000526463 PIK3C2AO00443 1686 aa29.18■■■□□ 2.26
CCDC84-203ENST00000526463 PUS7Q96PZ0 661 aaKnown RBP29.17■■■□□ 2.26
CCDC84-203ENST00000526463 NLRP13Q86W25 1043 aa29.16■■■□□ 2.26
CCDC84-203ENST00000526463 USP19O94966 1318 aa29.16■■■□□ 2.26
CCDC84-203ENST00000526463 GJD4Q96KN9 370 aaPredicted RBP29.15■■■□□ 2.26
CCDC84-203ENST00000526463 PRDM11Q9NQV5 511 aa29.15■■■□□ 2.26
CCDC84-203ENST00000526463 GLI3P10071 1580 aa29.14■■■□□ 2.26
CCDC84-203ENST00000526463 KTN1Q86UP2 1357 aaKnown RBP29.13■■■□□ 2.25
CCDC84-203ENST00000526463 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
CCDC84-203ENST00000526463 TMC1Q8TDI8 760 aa29.12■■■□□ 2.25
CCDC84-203ENST00000526463 CD163L1Q9NR16 1453 aa29.11■■■□□ 2.25
CCDC84-203ENST00000526463 VPS72Q15906 364 aa29.11■■■□□ 2.25
CCDC84-203ENST00000526463 BTG4Q9NY30 223 aa29.11■■■□□ 2.25
CCDC84-203ENST00000526463 NLRP6P59044 892 aa29.1■■■□□ 2.25
CCDC84-203ENST00000526463 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
CCDC84-203ENST00000526463 TTC21AQ8NDW8 1320 aa29.1■■■□□ 2.25
CCDC84-203ENST00000526463 SLIT3O75094 1523 aa29.1■■■□□ 2.25
CCDC84-203ENST00000526463 ZC3H6P61129 1189 aaKnown RBP29.09■■■□□ 2.25
CCDC84-203ENST00000526463 NINLQ9Y2I6 1382 aa29.09■■■□□ 2.25
CCDC84-203ENST00000526463 TMF1P82094 1093 aa29.08■■■□□ 2.25
CCDC84-203ENST00000526463 CPDO75976 1380 aa29.07■■■□□ 2.24
CCDC84-203ENST00000526463 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
CCDC84-203ENST00000526463 SLC12A5Q9H2X9 1139 aa29.07■■■□□ 2.24
CCDC84-203ENST00000526463 GCP02774 474 aa29.06■■■□□ 2.24
CCDC84-203ENST00000526463 CCDC9Q9Y3X0 531 aaKnown RBP29.06■■■□□ 2.24
CCDC84-203ENST00000526463 CHRNA2Q15822 529 aa29.05■■■□□ 2.24
CCDC84-203ENST00000526463 TERF2IPQ9NYB0 399 aa29.05■■■□□ 2.24
CCDC84-203ENST00000526463 USP54Q70EL1 1684 aa29.04■■■□□ 2.24
CCDC84-203ENST00000526463 LMO7Q8WWI1 1683 aa29.04■■■□□ 2.24
CCDC84-203ENST00000526463 BRWD3Q6RI45 1802 aa29.03■■■□□ 2.24
CCDC84-203ENST00000526463 A0A1W2PP64 1363 aa29.02■■■□□ 2.24
CCDC84-203ENST00000526463 EDC4Q6P2E9 1401 aaKnown RBP29.02■■■□□ 2.24
CCDC84-203ENST00000526463 CDCA8Q53HL2 280 aa29■■■□□ 2.23
CCDC84-203ENST00000526463 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
CCDC84-203ENST00000526463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.98■■■□□ 2.23
CCDC84-203ENST00000526463 KCNH5Q8NCM2 988 aa28.97■■■□□ 2.23
CCDC84-203ENST00000526463 UPF1Q92900 1129 aaKnown RBP eCLIP28.96■■■□□ 2.23
CCDC84-203ENST00000526463 USP31Q70CQ4 1352 aa28.96■■■□□ 2.23
CCDC84-203ENST00000526463 SPATA31A5Q5VU36 1347 aa28.95■■■□□ 2.23
CCDC84-203ENST00000526463 SPATA31A7Q8IWB4 1347 aa28.95■■■□□ 2.23
CCDC84-203ENST00000526463 STRN4Q9NRL3 753 aa28.95■■■□□ 2.22
CCDC84-203ENST00000526463 COL18A1P39060 1754 aa28.95■■■□□ 2.22
CCDC84-203ENST00000526463 MYOM1P52179 1685 aa28.94■■■□□ 2.22
CCDC84-203ENST00000526463 ANKRD36BQ8N2N9 1353 aa28.94■■■□□ 2.22
CCDC84-203ENST00000526463 ONECUT3O60422 494 aaPredicted RBP28.94■■■□□ 2.22
CCDC84-203ENST00000526463 NFAT5O94916 1531 aa28.94■■■□□ 2.22
CCDC84-203ENST00000526463 AATKQ6ZMQ8 1374 aa28.93■■■□□ 2.22
CCDC84-203ENST00000526463 NME9Q86XW9 330 aa28.93■■■□□ 2.22
CCDC84-203ENST00000526463 SEPT12Q8IYM1 358 aa28.93■■■□□ 2.22
CCDC84-203ENST00000526463 ZBTB7CA1YPR0 619 aa28.92■■■□□ 2.22
CCDC84-203ENST00000526463 EVA1CP58658 441 aa28.92■■■□□ 2.22
CCDC84-203ENST00000526463 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
CCDC84-203ENST00000526463 RGPD5Q99666 1765 aa28.91■■■□□ 2.22
CCDC84-203ENST00000526463 COL5A2P05997 1499 aaPredicted RBP28.91■■■□□ 2.22
CCDC84-203ENST00000526463 FAM98CQ17RN3 349 aaKnown RBP28.9■■■□□ 2.22
CCDC84-203ENST00000526463 ZRANB1Q9UGI0 708 aa28.9■■■□□ 2.22
CCDC84-203ENST00000526463 LTN1O94822 1766 aa28.9■■■□□ 2.22
CCDC84-203ENST00000526463 SPATA31A1Q5TZJ5 1347 aa28.9■■■□□ 2.22
CCDC84-203ENST00000526463 THSD7AQ9UPZ6 1657 aa28.89■■■□□ 2.22
CCDC84-203ENST00000526463 A0A0G2JS52 829 aa28.89■■■□□ 2.22
CCDC84-203ENST00000526463 SOX12O15370 315 aa28.89■■■□□ 2.22
CCDC84-203ENST00000526463 MYT1Q01538 1121 aa28.89■■■□□ 2.22
CCDC84-203ENST00000526463 ARHGEF25Q86VW2 580 aa28.88■■■□□ 2.21
CCDC84-203ENST00000526463 ABCC6O95255 1503 aa28.87■■■□□ 2.21
CCDC84-203ENST00000526463 OVOS2A0A0J9YW53 1432 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms