RNA–Protein interactions for RNA: ENST00000526195.5

CTSB-210, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-210ENST00000526195 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.25
CTSB-210ENST00000526195 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
CTSB-210ENST00000526195 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
CTSB-210ENST00000526195 ABCA3Q99758 1704 aa22.88■■□□□ 1.25
CTSB-210ENST00000526195 RBM6P78332 1123 aaKnown RBP22.86■■□□□ 1.25
CTSB-210ENST00000526195 TIMELESSQ9UNS1 1208 aa22.86■■□□□ 1.25
CTSB-210ENST00000526195 NUTM2GQ5VZR2 741 aa22.85■■□□□ 1.25
CTSB-210ENST00000526195 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
CTSB-210ENST00000526195 SLIT2O94813 1529 aa22.85■■□□□ 1.25
CTSB-210ENST00000526195 ATRNO75882 1429 aa22.84■■□□□ 1.25
CTSB-210ENST00000526195 ST20-MTHFSA0A0A6YYL1 179 aa22.83■■□□□ 1.25
CTSB-210ENST00000526195 FAM83GA6ND36 823 aa22.83■■□□□ 1.25
CTSB-210ENST00000526195 UNC5CLQ8IV45 518 aa22.82■■□□□ 1.24
CTSB-210ENST00000526195 USP6P35125 1406 aa22.82■■□□□ 1.24
CTSB-210ENST00000526195 CDK12Q9NYV4 1490 aaPredicted RBP22.81■■□□□ 1.24
CTSB-210ENST00000526195 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
CTSB-210ENST00000526195 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
CTSB-210ENST00000526195 TESK2Q96S53 571 aa22.81■■□□□ 1.24
CTSB-210ENST00000526195 RGS12O14924 1447 aa22.81■■□□□ 1.24
CTSB-210ENST00000526195 CRYBG1Q9Y4K1 1723 aa22.8■■□□□ 1.24
CTSB-210ENST00000526195 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
CTSB-210ENST00000526195 USP47Q96K76 1375 aa22.77■■□□□ 1.24
CTSB-210ENST00000526195 GJD4Q96KN9 370 aaPredicted RBP22.77■■□□□ 1.24
CTSB-210ENST00000526195 BRD4O60885 1362 aaPredicted RBP22.76■■□□□ 1.23
CTSB-210ENST00000526195 CPSF1Q10570 1443 aaKnown RBP22.75■■□□□ 1.23
CTSB-210ENST00000526195 PLCH1Q4KWH8 1693 aa22.75■■□□□ 1.23
CTSB-210ENST00000526195 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.75■■□□□ 1.23
CTSB-210ENST00000526195 USP19O94966 1318 aa22.75■■□□□ 1.23
CTSB-210ENST00000526195 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
CTSB-210ENST00000526195 ZNF692Q9BU19 519 aaPredicted RBP22.74■■□□□ 1.23
CTSB-210ENST00000526195 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
CTSB-210ENST00000526195 BTG4Q9NY30 223 aa22.74■■□□□ 1.23
CTSB-210ENST00000526195 PHRF1Q9P1Y6 1649 aaKnown RBP22.74■■□□□ 1.23
CTSB-210ENST00000526195 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
CTSB-210ENST00000526195 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
CTSB-210ENST00000526195 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
CTSB-210ENST00000526195 NWD2Q9ULI1 1742 aa22.72■■□□□ 1.23
CTSB-210ENST00000526195 VPS72Q15906 364 aa22.72■■□□□ 1.23
CTSB-210ENST00000526195 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
CTSB-210ENST00000526195 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
CTSB-210ENST00000526195 CD163L1Q9NR16 1453 aa22.72■■□□□ 1.23
CTSB-210ENST00000526195 NLRP6P59044 892 aa22.71■■□□□ 1.23
CTSB-210ENST00000526195 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
CTSB-210ENST00000526195 PUS7Q96PZ0 661 aaKnown RBP22.71■■□□□ 1.23
CTSB-210ENST00000526195 KTN1Q86UP2 1357 aaKnown RBP22.71■■□□□ 1.23
CTSB-210ENST00000526195 GLI3P10071 1580 aa22.71■■□□□ 1.23
CTSB-210ENST00000526195 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
CTSB-210ENST00000526195 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
CTSB-210ENST00000526195 GCP02774 474 aa22.7■■□□□ 1.22
CTSB-210ENST00000526195 AKAP12Q02952 1782 aa22.7■■□□□ 1.22
CTSB-210ENST00000526195 PIK3C2AO00443 1686 aa22.68■■□□□ 1.22
CTSB-210ENST00000526195 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
CTSB-210ENST00000526195 NRAPQ86VF7 1730 aa22.68■■□□□ 1.22
CTSB-210ENST00000526195 SLC24A1O60721 1099 aa22.67■■□□□ 1.22
CTSB-210ENST00000526195 TTC21AQ8NDW8 1320 aa22.66■■□□□ 1.22
CTSB-210ENST00000526195 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
CTSB-210ENST00000526195 CPDO75976 1380 aa22.65■■□□□ 1.22
CTSB-210ENST00000526195 TMF1P82094 1093 aa22.65■■□□□ 1.22
CTSB-210ENST00000526195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
CTSB-210ENST00000526195 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.22
CTSB-210ENST00000526195 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
CTSB-210ENST00000526195 EP400Q96L91 3159 aa22.64■■□□□ 1.22
CTSB-210ENST00000526195 SLIT3O75094 1523 aa22.64■■□□□ 1.21
CTSB-210ENST00000526195 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
CTSB-210ENST00000526195 ZRANB1Q9UGI0 708 aa22.63■■□□□ 1.21
CTSB-210ENST00000526195 TERF2IPQ9NYB0 399 aa22.62■■□□□ 1.21
CTSB-210ENST00000526195 NME9Q86XW9 330 aa22.61■■□□□ 1.21
CTSB-210ENST00000526195 STRN4Q9NRL3 753 aa22.61■■□□□ 1.21
CTSB-210ENST00000526195 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
CTSB-210ENST00000526195 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
CTSB-210ENST00000526195 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
CTSB-210ENST00000526195 ZBTB7CA1YPR0 619 aa22.6■■□□□ 1.21
CTSB-210ENST00000526195 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
CTSB-210ENST00000526195 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
CTSB-210ENST00000526195 CAMTA1Q9Y6Y1 1673 aa22.6■■□□□ 1.21
CTSB-210ENST00000526195 EDC4Q6P2E9 1401 aaKnown RBP22.59■■□□□ 1.21
CTSB-210ENST00000526195 SOX12O15370 315 aa22.59■■□□□ 1.21
CTSB-210ENST00000526195 FAM98CQ17RN3 349 aaKnown RBP22.59■■□□□ 1.21
CTSB-210ENST00000526195 LMO7Q8WWI1 1683 aa22.58■■□□□ 1.2
CTSB-210ENST00000526195 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
CTSB-210ENST00000526195 EVA1CP58658 441 aa22.56■■□□□ 1.2
CTSB-210ENST00000526195 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
CTSB-210ENST00000526195 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
CTSB-210ENST00000526195 AATKQ6ZMQ8 1374 aa22.55■■□□□ 1.2
CTSB-210ENST00000526195 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
CTSB-210ENST00000526195 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
CTSB-210ENST00000526195 ARHGEF25Q86VW2 580 aa22.55■■□□□ 1.2
CTSB-210ENST00000526195 ANKRD36BQ8N2N9 1353 aa22.54■■□□□ 1.2
CTSB-210ENST00000526195 NFAT5O94916 1531 aa22.54■■□□□ 1.2
CTSB-210ENST00000526195 A0A0G2JS52 829 aa22.54■■□□□ 1.2
CTSB-210ENST00000526195 HSPA5P11021 654 aaKnown RBP22.54■■□□□ 1.2
CTSB-210ENST00000526195 MYT1Q01538 1121 aa22.54■■□□□ 1.2
CTSB-210ENST00000526195 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
CTSB-210ENST00000526195 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
CTSB-210ENST00000526195 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
CTSB-210ENST00000526195 AXIN2Q9Y2T1 843 aa22.53■■□□□ 1.2
CTSB-210ENST00000526195 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
CTSB-210ENST00000526195 OVOS2A0A0J9YW53 1432 aa22.5■■□□□ 1.19
CTSB-210ENST00000526195 OVOS2Q6IE36 1432 aa22.5■■□□□ 1.19
CTSB-210ENST00000526195 USP54Q70EL1 1684 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms