RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
SVIP-202ENST00000525670 EHBP1Q8NDI1 1231 aa9.63□□□□□ -0.87
SVIP-202ENST00000525670 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
SVIP-202ENST00000525670 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
SVIP-202ENST00000525670 DACH1Q9UI36 760 aa9.63□□□□□ -0.87
SVIP-202ENST00000525670 SIAH2O43255 324 aa9.62□□□□□ -0.87
SVIP-202ENST00000525670 BAP1Q92560 729 aa9.62□□□□□ -0.87
SVIP-202ENST00000525670 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
SVIP-202ENST00000525670 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
SVIP-202ENST00000525670 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
SVIP-202ENST00000525670 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
SVIP-202ENST00000525670 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
SVIP-202ENST00000525670 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
SVIP-202ENST00000525670 HPS1Q92902 700 aa9.61□□□□□ -0.87
SVIP-202ENST00000525670 ZNF775Q96BV0 537 aaPredicted RBP9.61□□□□□ -0.87
SVIP-202ENST00000525670 LILRB3O75022 631 aa9.6□□□□□ -0.87
SVIP-202ENST00000525670 CTHP32929 405 aa9.6□□□□□ -0.87
SVIP-202ENST00000525670 QPCTQ16769 361 aa9.6□□□□□ -0.87
SVIP-202ENST00000525670 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
SVIP-202ENST00000525670 SMARCA4P51532 1647 aa9.6□□□□□ -0.87
SVIP-202ENST00000525670 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
SVIP-202ENST00000525670 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
SVIP-202ENST00000525670 F12P00748 615 aaPredicted RBP9.57□□□□□ -0.88
SVIP-202ENST00000525670 CLK2P49760 499 aaKnown RBP9.57□□□□□ -0.88
SVIP-202ENST00000525670 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
SVIP-202ENST00000525670 TSC1Q92574 1164 aa9.56□□□□□ -0.88
SVIP-202ENST00000525670 POLR3EQ9NVU0 708 aa9.56□□□□□ -0.88
SVIP-202ENST00000525670 WASF2Q9Y6W5 498 aa9.56□□□□□ -0.88
SVIP-202ENST00000525670 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
SVIP-202ENST00000525670 PER1O15534 1290 aaPredicted RBP9.55□□□□□ -0.88
SVIP-202ENST00000525670 RTL5Q5HYW3 569 aaPredicted RBP9.55□□□□□ -0.88
SVIP-202ENST00000525670 MPNDQ8N594 471 aa9.55□□□□□ -0.88
SVIP-202ENST00000525670 ATP13A2Q9NQ11 1180 aa9.55□□□□□ -0.88
SVIP-202ENST00000525670 MAP10Q9P2G4 905 aa9.55□□□□□ -0.88
SVIP-202ENST00000525670 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
SVIP-202ENST00000525670 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
SVIP-202ENST00000525670 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
SVIP-202ENST00000525670 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
SVIP-202ENST00000525670 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
SVIP-202ENST00000525670 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
SVIP-202ENST00000525670 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
SVIP-202ENST00000525670 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
SVIP-202ENST00000525670 FAM174AQ8TBP5 190 aa9.51□□□□□ -0.89
SVIP-202ENST00000525670 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
SVIP-202ENST00000525670 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
SVIP-202ENST00000525670 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
SVIP-202ENST00000525670 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
SVIP-202ENST00000525670 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
SVIP-202ENST00000525670 TLL2Q9Y6L7 1015 aa9.5□□□□□ -0.89
SVIP-202ENST00000525670 WIZO95785 1651 aa9.49□□□□□ -0.89
SVIP-202ENST00000525670 ATAD2BQ9ULI0 1458 aa9.49□□□□□ -0.89
SVIP-202ENST00000525670 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
SVIP-202ENST00000525670 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
SVIP-202ENST00000525670 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
SVIP-202ENST00000525670 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
SVIP-202ENST00000525670 AGERQ15109 404 aa9.47□□□□□ -0.89
SVIP-202ENST00000525670 KIFC2Q96AC6 838 aa9.47□□□□□ -0.89
SVIP-202ENST00000525670 CDK15Q96Q40 435 aa9.47□□□□□ -0.89
SVIP-202ENST00000525670 SNRPBP14678 240 aaKnown RBP9.46□□□□□ -0.9
SVIP-202ENST00000525670 CTDSPL2Q05D32 466 aa9.46□□□□□ -0.9
SVIP-202ENST00000525670 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
SVIP-202ENST00000525670 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
SVIP-202ENST00000525670 BAZ1BQ9UIG0 1483 aaKnown RBP9.46□□□□□ -0.9
SVIP-202ENST00000525670 ADH1CP00326 375 aa9.45□□□□□ -0.9
SVIP-202ENST00000525670 NNTQ13423 1086 aa9.45□□□□□ -0.9
SVIP-202ENST00000525670 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
SVIP-202ENST00000525670 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
SVIP-202ENST00000525670 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
SVIP-202ENST00000525670 NBPF14Q5TI25 921 aa9.44□□□□□ -0.9
SVIP-202ENST00000525670 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
SVIP-202ENST00000525670 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
SVIP-202ENST00000525670 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
SVIP-202ENST00000525670 NR5A1Q13285 461 aa9.42□□□□□ -0.9
SVIP-202ENST00000525670 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
SVIP-202ENST00000525670 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
SVIP-202ENST00000525670 TRIM46Q7Z4K8 759 aa9.42□□□□□ -0.9
SVIP-202ENST00000525670 SH3RF1Q7Z6J0 888 aa9.42□□□□□ -0.9
SVIP-202ENST00000525670 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
SVIP-202ENST00000525670 GRM5P41594 1212 aa9.41□□□□□ -0.9
SVIP-202ENST00000525670 SH3BP5LQ7L8J4 393 aa9.41□□□□□ -0.9
SVIP-202ENST00000525670 C1QTNF2Q9BXJ5 285 aa9.41□□□□□ -0.9
SVIP-202ENST00000525670 KLF16Q9BXK1 252 aaPredicted RBP9.41□□□□□ -0.9
SVIP-202ENST00000525670 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
SVIP-202ENST00000525670 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
SVIP-202ENST00000525670 BMP1P13497 986 aa9.4□□□□□ -0.9
SVIP-202ENST00000525670 TIMP2P16035 220 aa9.4□□□□□ -0.9
SVIP-202ENST00000525670 WDR4P57081 412 aaKnown RBP9.4□□□□□ -0.9
SVIP-202ENST00000525670 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
SVIP-202ENST00000525670 RSF1Q96T23 1441 aaPredicted RBP9.39□□□□□ -0.91
SVIP-202ENST00000525670 WFS1O76024 890 aa9.38□□□□□ -0.91
SVIP-202ENST00000525670 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
SVIP-202ENST00000525670 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
SVIP-202ENST00000525670 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
SVIP-202ENST00000525670 FKBPLQ9UIM3 349 aa9.38□□□□□ -0.91
SVIP-202ENST00000525670 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
SVIP-202ENST00000525670 AP1G2O75843 785 aa9.37□□□□□ -0.91
SVIP-202ENST00000525670 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
SVIP-202ENST00000525670 MAP4K5Q9Y4K4 846 aa9.37□□□□□ -0.91
SVIP-202ENST00000525670 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
SVIP-202ENST00000525670 NR3C2P08235 984 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms