RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
CDC27-202ENST00000525495 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
CDC27-202ENST00000525495 EVC2Q86UK5 1308 aa16.87■□□□□ 0.29
CDC27-202ENST00000525495 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
CDC27-202ENST00000525495 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
CDC27-202ENST00000525495 ARHGEF10O15013 1369 aa16.86■□□□□ 0.29
CDC27-202ENST00000525495 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
CDC27-202ENST00000525495 CRYBG1Q9Y4K1 1723 aa16.85■□□□□ 0.29
CDC27-202ENST00000525495 SBNO2Q9Y2G9 1366 aa16.85■□□□□ 0.29
CDC27-202ENST00000525495 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
CDC27-202ENST00000525495 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
CDC27-202ENST00000525495 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
CDC27-202ENST00000525495 CABP1Q9NZU7 370 aa16.83■□□□□ 0.28
CDC27-202ENST00000525495 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
CDC27-202ENST00000525495 BCL9LQ86UU0 1499 aa16.81■□□□□ 0.28
CDC27-202ENST00000525495 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
CDC27-202ENST00000525495 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
CDC27-202ENST00000525495 USP21Q9UK80 565 aa16.8■□□□□ 0.28
CDC27-202ENST00000525495 SLIT2O94813 1529 aa16.8■□□□□ 0.28
CDC27-202ENST00000525495 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
CDC27-202ENST00000525495 PLCH1Q4KWH8 1693 aa16.79■□□□□ 0.28
CDC27-202ENST00000525495 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
CDC27-202ENST00000525495 RXRBP28702 533 aa16.79■□□□□ 0.28
CDC27-202ENST00000525495 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
CDC27-202ENST00000525495 TESK2Q96S53 571 aa16.79■□□□□ 0.28
CDC27-202ENST00000525495 PHRF1Q9P1Y6 1649 aaKnown RBP16.79■□□□□ 0.28
CDC27-202ENST00000525495 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.78■□□□□ 0.28
CDC27-202ENST00000525495 USP6P35125 1406 aa16.78■□□□□ 0.28
CDC27-202ENST00000525495 ATAD2Q6PL18 1390 aa16.78■□□□□ 0.28
CDC27-202ENST00000525495 ATRNO75882 1429 aa16.78■□□□□ 0.28
CDC27-202ENST00000525495 USP47Q96K76 1375 aa16.77■□□□□ 0.27
CDC27-202ENST00000525495 SSH2Q76I76 1423 aa16.76■□□□□ 0.27
CDC27-202ENST00000525495 NWD2Q9ULI1 1742 aa16.76■□□□□ 0.27
CDC27-202ENST00000525495 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
CDC27-202ENST00000525495 RBM6P78332 1123 aaKnown RBP16.75■□□□□ 0.27
CDC27-202ENST00000525495 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
CDC27-202ENST00000525495 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
CDC27-202ENST00000525495 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
CDC27-202ENST00000525495 CPSF1Q10570 1443 aaKnown RBP16.74■□□□□ 0.27
CDC27-202ENST00000525495 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
CDC27-202ENST00000525495 MON2Q7Z3U7 1717 aa16.74■□□□□ 0.27
CDC27-202ENST00000525495 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
CDC27-202ENST00000525495 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
CDC27-202ENST00000525495 RGS12O14924 1447 aa16.74■□□□□ 0.27
CDC27-202ENST00000525495 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
CDC27-202ENST00000525495 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
CDC27-202ENST00000525495 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
CDC27-202ENST00000525495 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
CDC27-202ENST00000525495 USP19O94966 1318 aa16.72■□□□□ 0.27
CDC27-202ENST00000525495 GLI3P10071 1580 aa16.71■□□□□ 0.27
CDC27-202ENST00000525495 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
CDC27-202ENST00000525495 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
CDC27-202ENST00000525495 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.27
CDC27-202ENST00000525495 KIAA0232Q92628 1395 aa16.7■□□□□ 0.26
CDC27-202ENST00000525495 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
CDC27-202ENST00000525495 PUS7Q96PZ0 661 aaKnown RBP16.7■□□□□ 0.26
CDC27-202ENST00000525495 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
CDC27-202ENST00000525495 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
CDC27-202ENST00000525495 ZC3H6P61129 1189 aaKnown RBP16.69■□□□□ 0.26
CDC27-202ENST00000525495 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
CDC27-202ENST00000525495 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
CDC27-202ENST00000525495 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
CDC27-202ENST00000525495 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
CDC27-202ENST00000525495 BTG4Q9NY30 223 aa16.68■□□□□ 0.26
CDC27-202ENST00000525495 SLIT3O75094 1523 aa16.68■□□□□ 0.26
CDC27-202ENST00000525495 NLRP6P59044 892 aa16.67■□□□□ 0.26
CDC27-202ENST00000525495 GCP02774 474 aa16.67■□□□□ 0.26
CDC27-202ENST00000525495 VPS72Q15906 364 aa16.67■□□□□ 0.26
CDC27-202ENST00000525495 A0A1W2PP64 1363 aa16.66■□□□□ 0.26
CDC27-202ENST00000525495 TMF1P82094 1093 aa16.66■□□□□ 0.26
CDC27-202ENST00000525495 CPDO75976 1380 aa16.66■□□□□ 0.26
CDC27-202ENST00000525495 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
CDC27-202ENST00000525495 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
CDC27-202ENST00000525495 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
CDC27-202ENST00000525495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
CDC27-202ENST00000525495 CAMTA1Q9Y6Y1 1673 aa16.63■□□□□ 0.25
CDC27-202ENST00000525495 NINLQ9Y2I6 1382 aa16.63■□□□□ 0.25
CDC27-202ENST00000525495 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
CDC27-202ENST00000525495 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
CDC27-202ENST00000525495 USP54Q70EL1 1684 aa16.63■□□□□ 0.25
CDC27-202ENST00000525495 BRWD3Q6RI45 1802 aa16.63■□□□□ 0.25
CDC27-202ENST00000525495 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
CDC27-202ENST00000525495 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
CDC27-202ENST00000525495 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
CDC27-202ENST00000525495 MYOM1P52179 1685 aa16.62■□□□□ 0.25
CDC27-202ENST00000525495 NME9Q86XW9 330 aa16.61■□□□□ 0.25
CDC27-202ENST00000525495 EP400Q96L91 3159 aa16.61■□□□□ 0.25
CDC27-202ENST00000525495 COL18A1P39060 1754 aa16.61■□□□□ 0.25
CDC27-202ENST00000525495 NFAT5O94916 1531 aa16.6■□□□□ 0.25
CDC27-202ENST00000525495 USP31Q70CQ4 1352 aa16.6■□□□□ 0.25
CDC27-202ENST00000525495 STRN4Q9NRL3 753 aa16.6■□□□□ 0.25
CDC27-202ENST00000525495 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
CDC27-202ENST00000525495 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
CDC27-202ENST00000525495 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
CDC27-202ENST00000525495 SOX12O15370 315 aa16.59■□□□□ 0.25
CDC27-202ENST00000525495 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
CDC27-202ENST00000525495 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDC27-202ENST00000525495 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDC27-202ENST00000525495 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.24
CDC27-202ENST00000525495 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms