RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 HAP1P54257 671 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-215ENST00000525334 TRPC5Q9UL62 973 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-215ENST00000525334 SBNO2Q9Y2G9 1366 aa26.28■■□□□ 1.8
TSPAN4-215ENST00000525334 CDK12Q9NYV4 1490 aaPredicted RBP26.28■■□□□ 1.8
TSPAN4-215ENST00000525334 CRYBG1Q9Y4K1 1723 aa26.25■■□□□ 1.79
TSPAN4-215ENST00000525334 BCL9LQ86UU0 1499 aa26.25■■□□□ 1.79
TSPAN4-215ENST00000525334 CABP1Q9NZU7 370 aa26.24■■□□□ 1.79
TSPAN4-215ENST00000525334 SLIT2O94813 1529 aa26.24■■□□□ 1.79
TSPAN4-215ENST00000525334 ATRNO75882 1429 aa26.23■■□□□ 1.79
TSPAN4-215ENST00000525334 TIMELESSQ9UNS1 1208 aa26.22■■□□□ 1.79
TSPAN4-215ENST00000525334 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-215ENST00000525334 PLCH1Q4KWH8 1693 aa26.21■■□□□ 1.79
TSPAN4-215ENST00000525334 CCER1Q8TC90 406 aaPredicted RBP26.2■■□□□ 1.78
TSPAN4-215ENST00000525334 UNC5CLQ8IV45 518 aa26.19■■□□□ 1.78
TSPAN4-215ENST00000525334 RGS12O14924 1447 aa26.19■■□□□ 1.78
TSPAN4-215ENST00000525334 USP6P35125 1406 aa26.19■■□□□ 1.78
TSPAN4-215ENST00000525334 ATAD2Q6PL18 1390 aa26.19■■□□□ 1.78
TSPAN4-215ENST00000525334 PHRF1Q9P1Y6 1649 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-215ENST00000525334 NUTM2GQ5VZR2 741 aa26.17■■□□□ 1.78
TSPAN4-215ENST00000525334 UPF1Q92900 1129 aaKnown RBP eCLIP26.17■■□□□ 1.78
TSPAN4-215ENST00000525334 NWD2Q9ULI1 1742 aa26.17■■□□□ 1.78
TSPAN4-215ENST00000525334 FAM83GA6ND36 823 aa26.16■■□□□ 1.78
TSPAN4-215ENST00000525334 BRD4O60885 1362 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-215ENST00000525334 ABTB2Q8N961 1025 aa26.15■■□□□ 1.78
TSPAN4-215ENST00000525334 GJD4Q96KN9 370 aaPredicted RBP26.15■■□□□ 1.78
TSPAN4-215ENST00000525334 ST20-MTHFSA0A0A6YYL1 179 aa26.14■■□□□ 1.78
TSPAN4-215ENST00000525334 AKAP12Q02952 1782 aa26.13■■□□□ 1.77
TSPAN4-215ENST00000525334 COL14A1Q05707 1796 aaKnown RBP26.13■■□□□ 1.77
TSPAN4-215ENST00000525334 SSH2Q76I76 1423 aa26.13■■□□□ 1.77
TSPAN4-215ENST00000525334 USP47Q96K76 1375 aa26.12■■□□□ 1.77
TSPAN4-215ENST00000525334 TESK2Q96S53 571 aa26.12■■□□□ 1.77
TSPAN4-215ENST00000525334 NRKQ7Z2Y5 1582 aa26.12■■□□□ 1.77
TSPAN4-215ENST00000525334 NRAPQ86VF7 1730 aa26.11■■□□□ 1.77
TSPAN4-215ENST00000525334 CPSF1Q10570 1443 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-215ENST00000525334 GLI3P10071 1580 aa26.1■■□□□ 1.77
TSPAN4-215ENST00000525334 USP19O94966 1318 aa26.1■■□□□ 1.77
TSPAN4-215ENST00000525334 KIAA0232Q92628 1395 aa26.08■■□□□ 1.77
TSPAN4-215ENST00000525334 VPS72Q15906 364 aa26.08■■□□□ 1.77
TSPAN4-215ENST00000525334 ZNF692Q9BU19 519 aaPredicted RBP26.08■■□□□ 1.77
TSPAN4-215ENST00000525334 PRDM11Q9NQV5 511 aa26.08■■□□□ 1.77
TSPAN4-215ENST00000525334 PIK3C2AO00443 1686 aa26.08■■□□□ 1.77
TSPAN4-215ENST00000525334 NLRP13Q86W25 1043 aa26.07■■□□□ 1.76
TSPAN4-215ENST00000525334 BTG4Q9NY30 223 aa26.07■■□□□ 1.76
TSPAN4-215ENST00000525334 MON2Q7Z3U7 1717 aa26.06■■□□□ 1.76
TSPAN4-215ENST00000525334 KTN1Q86UP2 1357 aaKnown RBP26.06■■□□□ 1.76
TSPAN4-215ENST00000525334 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
TSPAN4-215ENST00000525334 ZC3H6P61129 1189 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-215ENST00000525334 PUS7Q96PZ0 661 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-215ENST00000525334 TTC21BQ7Z4L5 1316 aa26.05■■□□□ 1.76
TSPAN4-215ENST00000525334 TMC1Q8TDI8 760 aa26.04■■□□□ 1.76
TSPAN4-215ENST00000525334 SLC24A1O60721 1099 aa26.03■■□□□ 1.76
TSPAN4-215ENST00000525334 NLRP6P59044 892 aa26.03■■□□□ 1.76
TSPAN4-215ENST00000525334 CHRNA2Q15822 529 aa26.03■■□□□ 1.76
TSPAN4-215ENST00000525334 SLC12A5Q9H2X9 1139 aa26.02■■□□□ 1.76
TSPAN4-215ENST00000525334 CCDC9Q9Y3X0 531 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-215ENST00000525334 SLIT3O75094 1523 aa26.02■■□□□ 1.76
TSPAN4-215ENST00000525334 ONECUT3O60422 494 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-215ENST00000525334 CPDO75976 1380 aa26.01■■□□□ 1.75
TSPAN4-215ENST00000525334 GCP02774 474 aa26.01■■□□□ 1.75
TSPAN4-215ENST00000525334 TTC21AQ8NDW8 1320 aa26.01■■□□□ 1.75
TSPAN4-215ENST00000525334 HDGFL2Q7Z4V5 671 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-215ENST00000525334 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
TSPAN4-215ENST00000525334 NINLQ9Y2I6 1382 aa25.97■■□□□ 1.75
TSPAN4-215ENST00000525334 LMO7Q8WWI1 1683 aa25.97■■□□□ 1.75
TSPAN4-215ENST00000525334 TMF1P82094 1093 aa25.97■■□□□ 1.75
TSPAN4-215ENST00000525334 SEPT12Q8IYM1 358 aa25.96■■□□□ 1.75
TSPAN4-215ENST00000525334 TERF2IPQ9NYB0 399 aa25.96■■□□□ 1.75
TSPAN4-215ENST00000525334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.95■■□□□ 1.74
TSPAN4-215ENST00000525334 CAMTA1Q9Y6Y1 1673 aa25.94■■□□□ 1.74
TSPAN4-215ENST00000525334 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
TSPAN4-215ENST00000525334 SPATA31A5Q5VU36 1347 aa25.93■■□□□ 1.74
TSPAN4-215ENST00000525334 SPATA31A7Q8IWB4 1347 aa25.93■■□□□ 1.74
TSPAN4-215ENST00000525334 STRN4Q9NRL3 753 aa25.93■■□□□ 1.74
TSPAN4-215ENST00000525334 BRWD3Q6RI45 1802 aa25.91■■□□□ 1.74
TSPAN4-215ENST00000525334 USP54Q70EL1 1684 aa25.91■■□□□ 1.74
TSPAN4-215ENST00000525334 NME9Q86XW9 330 aa25.91■■□□□ 1.74
TSPAN4-215ENST00000525334 ZBTB7CA1YPR0 619 aa25.9■■□□□ 1.74
TSPAN4-215ENST00000525334 FAM98CQ17RN3 349 aaKnown RBP25.9■■□□□ 1.74
TSPAN4-215ENST00000525334 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
TSPAN4-215ENST00000525334 USP31Q70CQ4 1352 aa25.9■■□□□ 1.74
TSPAN4-215ENST00000525334 KCNH5Q8NCM2 988 aa25.89■■□□□ 1.74
TSPAN4-215ENST00000525334 NFAT5O94916 1531 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 AATKQ6ZMQ8 1374 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 SOX12O15370 315 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 EVA1CP58658 441 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 CCDC125Q86Z20 511 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
TSPAN4-215ENST00000525334 COL5A2P05997 1499 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-215ENST00000525334 CDCA8Q53HL2 280 aa25.87■■□□□ 1.73
TSPAN4-215ENST00000525334 EP400Q96L91 3159 aa25.87■■□□□ 1.73
TSPAN4-215ENST00000525334 ANKRD36BQ8N2N9 1353 aa25.86■■□□□ 1.73
TSPAN4-215ENST00000525334 A0A0G2JS52 829 aa25.86■■□□□ 1.73
TSPAN4-215ENST00000525334 MYT1Q01538 1121 aa25.86■■□□□ 1.73
TSPAN4-215ENST00000525334 COL18A1P39060 1754 aa25.86■■□□□ 1.73
TSPAN4-215ENST00000525334 THSD7AQ9UPZ6 1657 aa25.85■■□□□ 1.73
TSPAN4-215ENST00000525334 KRT27Q7Z3Y8 459 aa25.85■■□□□ 1.73
TSPAN4-215ENST00000525334 LARP1Q6PKG0 1096 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-215ENST00000525334 ARHGEF25Q86VW2 580 aa25.84■■□□□ 1.73
TSPAN4-215ENST00000525334 OVOS2A0A0J9YW53 1432 aa25.83■■□□□ 1.73
TSPAN4-215ENST00000525334 OVOS2Q6IE36 1432 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms