RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
CTSC-203ENST00000524463 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
CTSC-203ENST00000524463 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
CTSC-203ENST00000524463 XBP1P17861 261 aa12.61□□□□□ -0.39
CTSC-203ENST00000524463 RRS1Q15050 365 aaKnown RBP12.61□□□□□ -0.39
CTSC-203ENST00000524463 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 PPM1FP49593 454 aaPredicted RBP12.6□□□□□ -0.39
CTSC-203ENST00000524463 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
CTSC-203ENST00000524463 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
CTSC-203ENST00000524463 CCDC158Q5M9N0 1113 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 RUFY1Q96T51 708 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
CTSC-203ENST00000524463 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.395e-7■■■■■ 34.1
CTSC-203ENST00000524463 GRM1Q13255 1194 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 SLC3A2P08195 630 aaKnown RBP12.59□□□□□ -0.39
CTSC-203ENST00000524463 CDK19Q9BWU1 502 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 NINLQ9Y2I6 1382 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 SMC2O95347 1197 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 USP5P45974 858 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 MPHOSPH8Q99549 860 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
CTSC-203ENST00000524463 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
CTSC-203ENST00000524463 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
CTSC-203ENST00000524463 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
CTSC-203ENST00000524463 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTSC-203ENST00000524463 MPNDQ8N594 471 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 CLASRPQ8N2M8 674 aaKnown RBP12.58□□□□□ -0.4
CTSC-203ENST00000524463 MIA2Q96PC5 1412 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
CTSC-203ENST00000524463 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 PDCL3Q9H2J4 239 aa12.58□□□□□ -0.4
CTSC-203ENST00000524463 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
CTSC-203ENST00000524463 GPS2Q13227 327 aa12.57□□□□□ -0.4
CTSC-203ENST00000524463 SEPT11Q9NVA2 429 aaKnown RBP12.57□□□□□ -0.4
CTSC-203ENST00000524463 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
CTSC-203ENST00000524463 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
CTSC-203ENST00000524463 TANGO6Q9C0B7 1094 aa12.57□□□□□ -0.4
CTSC-203ENST00000524463 SYCP1Q15431 976 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 C22orf23Q9BZE7 217 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 WDR78Q5VTH9 848 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
CTSC-203ENST00000524463 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
CTSC-203ENST00000524463 SKOR2Q2VWA4 1001 aaPredicted RBP12.56□□□□□ -0.4
CTSC-203ENST00000524463 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
CTSC-203ENST00000524463 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
CTSC-203ENST00000524463 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
CTSC-203ENST00000524463 GAS2L2Q8NHY3 880 aa12.55□□□□□ -0.4
CTSC-203ENST00000524463 CCDC69A6NI79 296 aa12.55□□□□□ -0.4
CTSC-203ENST00000524463 MNS1Q8NEH6 495 aa12.55□□□□□ -0.4
CTSC-203ENST00000524463 CDC45O75419 566 aa12.55□□□□□ -0.4
CTSC-203ENST00000524463 MAGEC2Q9UBF1 373 aaPredicted RBP12.55□□□□□ -0.4
CTSC-203ENST00000524463 ANKRD62A6NC57 917 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 PSMA5P28066 241 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 BCAR3O75815 825 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 ZNF76P36508 570 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 SPG7Q9UQ90 795 aa12.54□□□□□ -0.4
CTSC-203ENST00000524463 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 FIBPO43427 364 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 NEK4P51957 841 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 GSE1Q14687 1217 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
CTSC-203ENST00000524463 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
CTSC-203ENST00000524463 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.4
CTSC-203ENST00000524463 HSP90AA2PQ14568 343 aaPredicted RBP12.52□□□□□ -0.4
CTSC-203ENST00000524463 TDO2P48775 406 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 SCLT1Q96NL6 688 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 AK7Q96M32 723 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
CTSC-203ENST00000524463 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 NBPF1Q3BBV0 1214 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 AACSQ86V21 672 aa12.52□□□□□ -0.41
CTSC-203ENST00000524463 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 IDH1O75874 414 aaKnown RBP12.51□□□□□ -0.41
CTSC-203ENST00000524463 STK38Q15208 465 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 GNAI2P04899 355 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 NEFHP12036 1026 aa12.51□□□□□ -0.41
CTSC-203ENST00000524463 THEMISQ8N1K5 641 aaPredicted RBP12.51□□□□□ -0.41
CTSC-203ENST00000524463 TXLNAP40222 546 aa12.5□□□□□ -0.41
CTSC-203ENST00000524463 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
CTSC-203ENST00000524463 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
CTSC-203ENST00000524463 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
CTSC-203ENST00000524463 LIG1P18858 919 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms