RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PRKRIP1Q9H875 184 aaPredicted RBP10.68□□□□□ -0.7
SPIDR-223ENST00000524033 JCADQ9P266 1359 aa10.67□□□□□ -0.7
SPIDR-223ENST00000524033 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
SPIDR-223ENST00000524033 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
SPIDR-223ENST00000524033 CCDC184Q52MB2 194 aa10.67□□□□□ -0.7
SPIDR-223ENST00000524033 POTEAQ6S8J7 498 aa10.67□□□□□ -0.7
SPIDR-223ENST00000524033 BRINP3Q76B58 766 aa10.67□□□□□ -0.7
SPIDR-223ENST00000524033 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
SPIDR-223ENST00000524033 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
SPIDR-223ENST00000524033 TRPM2O94759 1503 aa10.66□□□□□ -0.7
SPIDR-223ENST00000524033 XIRP1Q702N8 1843 aaKnown RBP10.65□□□□□ -0.7
SPIDR-223ENST00000524033 DIP2AQ14689 1571 aa10.65□□□□□ -0.7
SPIDR-223ENST00000524033 MEX3CQ5U5Q3 659 aaKnown RBP10.65□□□□□ -0.7
SPIDR-223ENST00000524033 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
SPIDR-223ENST00000524033 RALGAPBQ86X10 1494 aa10.65□□□□□ -0.7
SPIDR-223ENST00000524033 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
SPIDR-223ENST00000524033 KIF7Q2M1P5 1343 aa10.64□□□□□ -0.71
SPIDR-223ENST00000524033 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
SPIDR-223ENST00000524033 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
SPIDR-223ENST00000524033 RGL3Q3MIN7 710 aa10.64□□□□□ -0.71
SPIDR-223ENST00000524033 KDM2AQ9Y2K7 1162 aa10.64□□□□□ -0.71
SPIDR-223ENST00000524033 RNF123Q5XPI4 1314 aa10.63□□□□□ -0.71
SPIDR-223ENST00000524033 EFCAB3Q8N7B9 438 aa10.63□□□□□ -0.71
SPIDR-223ENST00000524033 CHD2O14647 1828 aaKnown RBP10.63□□□□□ -0.71
SPIDR-223ENST00000524033 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
SPIDR-223ENST00000524033 NUTM2BA6NNL0 878 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-223ENST00000524033 NUTM2EB1AL46 878 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-223ENST00000524033 NUTM2AQ8IVF1 878 aaPredicted RBP10.62□□□□□ -0.71
SPIDR-223ENST00000524033 LRRC59Q96AG4 307 aaKnown RBP10.62□□□□□ -0.71
SPIDR-223ENST00000524033 DCCP43146 1447 aa10.61□□□□□ -0.71
SPIDR-223ENST00000524033 NLRP6P59044 892 aa10.61□□□□□ -0.71
SPIDR-223ENST00000524033 MYO5BQ9ULV0 1848 aa10.61□□□□□ -0.71
SPIDR-223ENST00000524033 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
SPIDR-223ENST00000524033 ZNF772Q68DY9 489 aaPredicted RBP10.6□□□□□ -0.71
SPIDR-223ENST00000524033 DDX17Q92841 729 aaKnown RBP10.6□□□□□ -0.71
SPIDR-223ENST00000524033 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 LAMC1P11047 1609 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 CLTCL1P53675 1640 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 SOX12O15370 315 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 STK26Q9P289 416 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 ROBO2Q9HCK4 1378 aa10.59□□□□□ -0.71
SPIDR-223ENST00000524033 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.71
SPIDR-223ENST00000524033 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 MST1RQ04912 1400 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 SPHKAPQ2M3C7 1700 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 IRX6P78412 446 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-223ENST00000524033 ORAI2Q96SN7 254 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-223ENST00000524033 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
SPIDR-223ENST00000524033 USP47Q96K76 1375 aa10.57□□□□□ -0.72
SPIDR-223ENST00000524033 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
SPIDR-223ENST00000524033 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
SPIDR-223ENST00000524033 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
SPIDR-223ENST00000524033 PHLPP1O60346 1717 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
SPIDR-223ENST00000524033 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 RXRBP28702 533 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 WAPLQ7Z5K2 1190 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
SPIDR-223ENST00000524033 C1orf167Q5SNV9 1468 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 LRPPRCP42704 1394 aaKnown RBP10.55□□□□□ -0.72
SPIDR-223ENST00000524033 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 CLCN6P51797 869 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 C8orf37Q96NL8 207 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 PTCH1Q13635 1447 aa10.55□□□□□ -0.72
SPIDR-223ENST00000524033 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-223ENST00000524033 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-223ENST00000524033 TIE1P35590 1138 aa10.54□□□□□ -0.72
SPIDR-223ENST00000524033 XRN1Q8IZH2 1706 aaKnown RBP10.54□□□□□ -0.72
SPIDR-223ENST00000524033 LRP6O75581 1613 aa10.54□□□□□ -0.72
SPIDR-223ENST00000524033 AFF2P51816 1311 aa10.54□□□□□ -0.72
SPIDR-223ENST00000524033 NUTM2FA1L443 756 aa10.53□□□□□ -0.72
SPIDR-223ENST00000524033 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
SPIDR-223ENST00000524033 ADAMTS2O95450 1211 aa10.53□□□□□ -0.72
SPIDR-223ENST00000524033 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
SPIDR-223ENST00000524033 QTRT2Q9H974 415 aaKnown RBP10.53□□□□□ -0.72
SPIDR-223ENST00000524033 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
SPIDR-223ENST00000524033 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
SPIDR-223ENST00000524033 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
SPIDR-223ENST00000524033 ABCC11Q96J66 1382 aa10.52□□□□□ -0.72
SPIDR-223ENST00000524033 FOXO3O43524 673 aa10.52□□□□□ -0.73
SPIDR-223ENST00000524033 FAM9BQ8IZU0 186 aa10.52□□□□□ -0.73
SPIDR-223ENST00000524033 C14orf93Q9H972 538 aaKnown RBP10.52□□□□□ -0.73
SPIDR-223ENST00000524033 KTN1Q86UP2 1357 aaKnown RBP10.52□□□□□ -0.73
SPIDR-223ENST00000524033 PNPLA6Q8IY17 1366 aa10.52□□□□□ -0.73
SPIDR-223ENST00000524033 CFAP70Q5T0N1 1121 aa10.51□□□□□ -0.73
SPIDR-223ENST00000524033 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
SPIDR-223ENST00000524033 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 EVX2Q03828 476 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 NPHP3Q7Z494 1330 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 BRD4O60885 1362 aaPredicted RBP10.5□□□□□ -0.73
SPIDR-223ENST00000524033 INSRP06213 1382 aa10.5□□□□□ -0.73
SPIDR-223ENST00000524033 RBM6P78332 1123 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms