RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 CFAP99D6REC4 459 aa8□□□□□ -1.13
PCM1-220ENST00000523896 AXIN1O15169 862 aa8□□□□□ -1.13
PCM1-220ENST00000523896 SKOR1P84550 965 aa8□□□□□ -1.13
PCM1-220ENST00000523896 PTCRAQ6ISU1 281 aaPredicted RBP8□□□□□ -1.13
PCM1-220ENST00000523896 POLR3EQ9NVU0 708 aa8□□□□□ -1.13
PCM1-220ENST00000523896 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
PCM1-220ENST00000523896 ALDH1A1P00352 501 aa7.98□□□□□ -1.13
PCM1-220ENST00000523896 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
PCM1-220ENST00000523896 QPCTQ16769 361 aa7.98□□□□□ -1.13
PCM1-220ENST00000523896 PCMTD1Q96MG8 357 aaPredicted RBP7.98□□□□□ -1.13
PCM1-220ENST00000523896 WASF2Q9Y6W5 498 aa7.98□□□□□ -1.13
PCM1-220ENST00000523896 ST8SIA5O15466 376 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 LILRB3O75022 631 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 AVPP01185 164 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 SH3BP2P78314 561 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 BAP1Q92560 729 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
PCM1-220ENST00000523896 J3QL48 77 aa7.96□□□□□ -1.14
PCM1-220ENST00000523896 SMPD1P17405 629 aa7.96□□□□□ -1.14
PCM1-220ENST00000523896 AGERQ15109 404 aa7.96□□□□□ -1.14
PCM1-220ENST00000523896 CRIPAKQ8N1N5 446 aa7.96□□□□□ -1.14
PCM1-220ENST00000523896 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
PCM1-220ENST00000523896 VARSP26640 1264 aaKnown RBP7.95□□□□□ -1.14
PCM1-220ENST00000523896 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
PCM1-220ENST00000523896 MAP10Q9P2G4 905 aa7.95□□□□□ -1.14
PCM1-220ENST00000523896 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
PCM1-220ENST00000523896 F12P00748 615 aaPredicted RBP7.93□□□□□ -1.14
PCM1-220ENST00000523896 RTL5Q5HYW3 569 aaPredicted RBP7.93□□□□□ -1.14
PCM1-220ENST00000523896 NBPF14Q5TI25 921 aa7.93□□□□□ -1.14
PCM1-220ENST00000523896 FAM174AQ8TBP5 190 aa7.93□□□□□ -1.14
PCM1-220ENST00000523896 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
PCM1-220ENST00000523896 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
PCM1-220ENST00000523896 BPHLQ86WA6 291 aaPredicted RBP7.91□□□□□ -1.14
PCM1-220ENST00000523896 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
PCM1-220ENST00000523896 HPS1Q92902 700 aa7.91□□□□□ -1.14
PCM1-220ENST00000523896 TIMELESSQ9UNS1 1208 aa7.91□□□□□ -1.14
PCM1-220ENST00000523896 SIAH2O43255 324 aa7.9□□□□□ -1.14
PCM1-220ENST00000523896 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
PCM1-220ENST00000523896 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
PCM1-220ENST00000523896 ARID5BQ14865 1188 aa7.89□□□□□ -1.15
PCM1-220ENST00000523896 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
PCM1-220ENST00000523896 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
PCM1-220ENST00000523896 AP1G2O75843 785 aa7.88□□□□□ -1.15
PCM1-220ENST00000523896 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
PCM1-220ENST00000523896 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
PCM1-220ENST00000523896 C14orf37Q86TY3 774 aa7.87□□□□□ -1.15
PCM1-220ENST00000523896 MPNDQ8N594 471 aa7.87□□□□□ -1.15
PCM1-220ENST00000523896 ATP13A2Q9NQ11 1180 aa7.87□□□□□ -1.15
PCM1-220ENST00000523896 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
PCM1-220ENST00000523896 CAPN5O15484 640 aaPredicted RBP7.86□□□□□ -1.15
PCM1-220ENST00000523896 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
PCM1-220ENST00000523896 NNTQ13423 1086 aa7.86□□□□□ -1.15
PCM1-220ENST00000523896 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
PCM1-220ENST00000523896 KIFC2Q96AC6 838 aa7.86□□□□□ -1.15
PCM1-220ENST00000523896 DACH1Q9UI36 760 aa7.86□□□□□ -1.15
PCM1-220ENST00000523896 MAGEB6P1A0A0J9YX57 407 aa7.85□□□□□ -1.15
PCM1-220ENST00000523896 POTECB2RU33 542 aa7.85□□□□□ -1.15
PCM1-220ENST00000523896 FLIIQ13045 1269 aa7.85□□□□□ -1.15
PCM1-220ENST00000523896 ADH1CP00326 375 aa7.84□□□□□ -1.15
PCM1-220ENST00000523896 RFC5P40937 340 aa7.83□□□□□ -1.16
PCM1-220ENST00000523896 FBXO31Q5XUX0 539 aaPredicted RBP7.83□□□□□ -1.16
PCM1-220ENST00000523896 LRRN4Q8WUT4 740 aa7.83□□□□□ -1.16
PCM1-220ENST00000523896 ZNF775Q96BV0 537 aaPredicted RBP7.83□□□□□ -1.16
PCM1-220ENST00000523896 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
PCM1-220ENST00000523896 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
PCM1-220ENST00000523896 WDR4P57081 412 aaKnown RBP7.82□□□□□ -1.16
PCM1-220ENST00000523896 NR5A1Q13285 461 aa7.82□□□□□ -1.16
PCM1-220ENST00000523896 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
PCM1-220ENST00000523896 CDK15Q96Q40 435 aa7.82□□□□□ -1.16
PCM1-220ENST00000523896 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
PCM1-220ENST00000523896 FKBPLQ9UIM3 349 aa7.82□□□□□ -1.16
PCM1-220ENST00000523896 SCARF1Q14162 830 aa7.81□□□□□ -1.16
PCM1-220ENST00000523896 ZBTB33Q86T24 672 aa7.81□□□□□ -1.16
PCM1-220ENST00000523896 TRIM47Q96LD4 638 aa7.81□□□□□ -1.16
PCM1-220ENST00000523896 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 PTK2Q05397 1052 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 MCM6Q14566 821 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 NR6A1Q15406 480 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 PDXDC2PQ6P474 469 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 BANK1Q8NDB2 785 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 SLC10A4Q96EP9 437 aa7.8□□□□□ -1.16
PCM1-220ENST00000523896 FSHRP23945 695 aa7.79□□□□□ -1.16
PCM1-220ENST00000523896 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
PCM1-220ENST00000523896 SH3RF1Q7Z6J0 888 aa7.79□□□□□ -1.16
PCM1-220ENST00000523896 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
PCM1-220ENST00000523896 MAP4K5Q9Y4K4 846 aa7.79□□□□□ -1.16
PCM1-220ENST00000523896 UPP2O95045 317 aa7.78□□□□□ -1.16
PCM1-220ENST00000523896 BMP1P13497 986 aa7.78□□□□□ -1.16
PCM1-220ENST00000523896 TRMT44Q8IYL2 757 aaKnown RBP7.78□□□□□ -1.16
PCM1-220ENST00000523896 C1QTNF2Q9BXJ5 285 aa7.78□□□□□ -1.16
PCM1-220ENST00000523896 ZIC2O95409 532 aaPredicted RBP7.77□□□□□ -1.17
PCM1-220ENST00000523896 TIMP2P16035 220 aa7.77□□□□□ -1.17
PCM1-220ENST00000523896 SNRPBP14678 240 aaKnown RBP7.76□□□□□ -1.17
PCM1-220ENST00000523896 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
PCM1-220ENST00000523896 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
PCM1-220ENST00000523896 APBB1O00213 710 aa7.75□□□□□ -1.17
PCM1-220ENST00000523896 SOCS7O14512 581 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms