RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 IL16Q14005 1332 aa14.55□□□□□ -0.08
TNPO1-213ENST00000523768 RLBP1P12271 317 aa14.54□□□□□ -0.08
TNPO1-213ENST00000523768 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
TNPO1-213ENST00000523768 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
TNPO1-213ENST00000523768 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
TNPO1-213ENST00000523768 RIMS2Q9UQ26 1411 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 PNNQ9H307 717 aaKnown RBP14.53□□□□□ -0.08
TNPO1-213ENST00000523768 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 KIF20BQ96Q89 1820 aa14.53□□□□□ -0.08
TNPO1-213ENST00000523768 ATP7BP35670 1465 aa14.52□□□□□ -0.08
TNPO1-213ENST00000523768 ZMYM3Q14202 1370 aa14.52□□□□□ -0.08
TNPO1-213ENST00000523768 VIRMAQ69YN4 1812 aaKnown RBP14.52□□□□□ -0.09
TNPO1-213ENST00000523768 DIAPH1O60610 1272 aaKnown RBP14.52□□□□□ -0.09
TNPO1-213ENST00000523768 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.09
TNPO1-213ENST00000523768 TNNQ9UQP3 1299 aa14.52□□□□□ -0.09
TNPO1-213ENST00000523768 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.09
TNPO1-213ENST00000523768 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
TNPO1-213ENST00000523768 ZKSCAN2Q63HK3 967 aa14.51□□□□□ -0.09
TNPO1-213ENST00000523768 LAS1LQ9Y4W2 734 aaKnown RBP14.51□□□□□ -0.09
TNPO1-213ENST00000523768 MVPQ14764 893 aaKnown RBP14.5□□□□□ -0.09
TNPO1-213ENST00000523768 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
TNPO1-213ENST00000523768 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
TNPO1-213ENST00000523768 TSR2Q969E8 191 aaKnown RBP14.49□□□□□ -0.09
TNPO1-213ENST00000523768 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
TNPO1-213ENST00000523768 FCHSD2O94868 740 aa14.48□□□□□ -0.09
TNPO1-213ENST00000523768 WAPLQ7Z5K2 1190 aa14.48□□□□□ -0.09
TNPO1-213ENST00000523768 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
TNPO1-213ENST00000523768 RWDD1Q9H446 243 aaPredicted RBP14.48□□□□□ -0.09
TNPO1-213ENST00000523768 NEFMP07197 916 aa14.48□□□□□ -0.09
TNPO1-213ENST00000523768 RIPK4P57078 832 aa14.47□□□□□ -0.09
TNPO1-213ENST00000523768 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.47□□□□□ -0.09
TNPO1-213ENST00000523768 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
TNPO1-213ENST00000523768 NRXN3Q9Y4C0 1643 aa14.47□□□□□ -0.09
TNPO1-213ENST00000523768 USP19O94966 1318 aa14.47□□□□□ -0.09
TNPO1-213ENST00000523768 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.09
TNPO1-213ENST00000523768 POLKQ9UBT6 870 aa14.46□□□□□ -0.09
TNPO1-213ENST00000523768 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
TNPO1-213ENST00000523768 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
TNPO1-213ENST00000523768 SSH1Q8WYL5 1049 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 PDZRN3Q9UPQ7 1066 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 FAM135BQ49AJ0 1406 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 EDC4Q6P2E9 1401 aaKnown RBP14.45□□□□□ -0.1
TNPO1-213ENST00000523768 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
TNPO1-213ENST00000523768 TRIM27P14373 513 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
TNPO1-213ENST00000523768 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
TNPO1-213ENST00000523768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.44□□□□□ -0.1
TNPO1-213ENST00000523768 SLC4A3P48751 1232 aa14.44□□□□□ -0.1
TNPO1-213ENST00000523768 DDX19BQ9UMR2 479 aa14.43□□□□□ -0.1
TNPO1-213ENST00000523768 METP08581 1390 aa14.43□□□□□ -0.1
TNPO1-213ENST00000523768 KNDC1Q76NI1 1749 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 TECPR2O15040 1411 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 MLECQ14165 292 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 KIF16BQ96L93 1317 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 HDAC1Q13547 482 aaPredicted RBP14.42□□□□□ -0.1
TNPO1-213ENST00000523768 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
TNPO1-213ENST00000523768 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 SEC24BO95487 1268 aa14.41□□□□□ -0.1
TNPO1-213ENST00000523768 NOB1Q9ULX3 412 aaKnown RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 CDK12Q9NYV4 1490 aaPredicted RBP14.41□□□□□ -0.1
TNPO1-213ENST00000523768 FBLN1P23142 703 aa14.4□□□□□ -0.1
TNPO1-213ENST00000523768 NFE2L2Q16236 605 aa14.4□□□□□ -0.1
TNPO1-213ENST00000523768 CPS1P31327 1500 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 IL13P35225 146 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 NFKBIBQ15653 356 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 ITPRIPQ8IWB1 547 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
TNPO1-213ENST00000523768 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 MON2Q7Z3U7 1717 aa14.39□□□□□ -0.11
TNPO1-213ENST00000523768 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
TNPO1-213ENST00000523768 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
TNPO1-213ENST00000523768 NME9Q86XW9 330 aa14.38□□□□□ -0.11
TNPO1-213ENST00000523768 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
TNPO1-213ENST00000523768 ZBTB40Q9NUA8 1239 aa14.38□□□□□ -0.11
TNPO1-213ENST00000523768 EMILIN1Q9Y6C2 1016 aa14.38□□□□□ -0.11
TNPO1-213ENST00000523768 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
TNPO1-213ENST00000523768 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
TNPO1-213ENST00000523768 SMC5Q8IY18 1101 aa14.37□□□□□ -0.11
TNPO1-213ENST00000523768 TNRQ92752 1358 aa14.36□□□□□ -0.11
TNPO1-213ENST00000523768 COG3Q96JB2 828 aa14.36□□□□□ -0.11
TNPO1-213ENST00000523768 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
TNPO1-213ENST00000523768 UPF2Q9HAU5 1272 aaKnown RBP14.36□□□□□ -0.11
TNPO1-213ENST00000523768 AKAP12Q02952 1782 aa14.36□□□□□ -0.11
TNPO1-213ENST00000523768 HMOX1P09601 288 aa14.35□□□□□ -0.11
TNPO1-213ENST00000523768 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
TNPO1-213ENST00000523768 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
TNPO1-213ENST00000523768 KIF13AQ9H1H9 1805 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms