RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ZNF692Q9BU19 519 aaPredicted RBP27.61■■■□□ 2.01
SQLE-206ENST00000523430 ZRANB1Q9UGI0 708 aa27.61■■■□□ 2.01
SQLE-206ENST00000523430 ANKARQ7Z5J8 1434 aa27.61■■■□□ 2.01
SQLE-206ENST00000523430 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
SQLE-206ENST00000523430 PDE3BQ13370 1112 aa27.59■■■□□ 2.01
SQLE-206ENST00000523430 CDCA7LQ96GN5 454 aa27.58■■■□□ 2.01
SQLE-206ENST00000523430 FBLN1P23142 703 aa27.57■■■□□ 2
SQLE-206ENST00000523430 PMFBP1Q8TBY8 1022 aa27.57■■■□□ 2
SQLE-206ENST00000523430 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
SQLE-206ENST00000523430 TTC21BQ7Z4L5 1316 aa27.56■■■□□ 2
SQLE-206ENST00000523430 APAF1O14727 1248 aa27.56■■■□□ 2
SQLE-206ENST00000523430 IQSEC2Q5JU85 1478 aa27.56■■■□□ 2
SQLE-206ENST00000523430 SSH2Q76I76 1423 aa27.55■■■□□ 2
SQLE-206ENST00000523430 ZNF521Q96K83 1311 aa27.55■■■□□ 2
SQLE-206ENST00000523430 PNPLA6Q8IY17 1366 aa27.54■■■□□ 2
SQLE-206ENST00000523430 IRX6P78412 446 aaPredicted RBP27.54■■■□□ 2
SQLE-206ENST00000523430 KDM4FA0A1W2PPD8 638 aa27.53■■■□□ 2
SQLE-206ENST00000523430 COG3Q96JB2 828 aa27.53■■■□□ 2
SQLE-206ENST00000523430 OVOS2A0A0J9YW53 1432 aa27.53■■■□□ 2
SQLE-206ENST00000523430 OVOS2Q6IE36 1432 aa27.53■■■□□ 2
SQLE-206ENST00000523430 MAP2P11137 1827 aaKnown RBP27.52■■■□□ 2
SQLE-206ENST00000523430 POLKQ9UBT6 870 aa27.52■■■□□ 2
SQLE-206ENST00000523430 AATKQ6ZMQ8 1374 aa27.5■■□□□ 1.99
SQLE-206ENST00000523430 U2AF1L5P0DN76 240 aaPredicted RBP27.49■■□□□ 1.99
SQLE-206ENST00000523430 U2AF1Q01081 240 aaKnown RBP eCLIP27.49■■□□□ 1.99
SQLE-206ENST00000523430 HSPA2P54652 639 aa27.49■■□□□ 1.99
SQLE-206ENST00000523430 NGDNQ8NEJ9 315 aaKnown RBP27.49■■□□□ 1.99
SQLE-206ENST00000523430 CDK12Q9NYV4 1490 aaPredicted RBP27.49■■□□□ 1.99
SQLE-206ENST00000523430 RUNDC1Q96C34 613 aa27.48■■□□□ 1.99
SQLE-206ENST00000523430 EMILIN1Q9Y6C2 1016 aa27.48■■□□□ 1.99
SQLE-206ENST00000523430 PPM1GO15355 546 aaPredicted RBP27.47■■□□□ 1.99
SQLE-206ENST00000523430 PIK3C2AO00443 1686 aa27.46■■□□□ 1.99
SQLE-206ENST00000523430 U2SURPO15042 1029 aaKnown RBP27.46■■□□□ 1.99
SQLE-206ENST00000523430 LMTK3Q96Q04 1460 aa27.46■■□□□ 1.99
SQLE-206ENST00000523430 DIAPH1O60610 1272 aaKnown RBP27.45■■□□□ 1.99
SQLE-206ENST00000523430 RNF123Q5XPI4 1314 aa27.44■■□□□ 1.98
SQLE-206ENST00000523430 TTC21AQ8NDW8 1320 aa27.44■■□□□ 1.98
SQLE-206ENST00000523430 STRCP1A6NGW2 1772 aa27.43■■□□□ 1.98
SQLE-206ENST00000523430 RRS1Q15050 365 aaKnown RBP27.43■■□□□ 1.98
SQLE-206ENST00000523430 GOLGA2Q08379 1002 aa27.42■■□□□ 1.98
SQLE-206ENST00000523430 C14orf37Q86TY3 774 aa27.42■■□□□ 1.98
SQLE-206ENST00000523430 TCP11L2Q8N4U5 519 aa27.41■■□□□ 1.98
SQLE-206ENST00000523430 RRP7AQ9Y3A4 280 aaKnown RBP27.41■■□□□ 1.98
SQLE-206ENST00000523430 USP31Q70CQ4 1352 aa27.4■■□□□ 1.98
SQLE-206ENST00000523430 LRRC7Q96NW7 1537 aa27.4■■□□□ 1.98
SQLE-206ENST00000523430 NGEFQ8N5V2 710 aa27.39■■□□□ 1.98
SQLE-206ENST00000523430 RCAN3Q9UKA8 241 aa27.39■■□□□ 1.98
SQLE-206ENST00000523430 DUSP27Q5VZP5 1158 aa27.38■■□□□ 1.97
SQLE-206ENST00000523430 DMRT2Q9Y5R5 561 aa27.38■■□□□ 1.97
SQLE-206ENST00000523430 MARF1Q9Y4F3 1742 aaKnown RBP27.38■■□□□ 1.97
SQLE-206ENST00000523430 PEAK1Q9H792 1746 aa27.38■■□□□ 1.97
SQLE-206ENST00000523430 PROSER2Q86WR7 435 aaPredicted RBP27.38■■□□□ 1.97
SQLE-206ENST00000523430 PLEKHF1Q96S99 279 aa27.38■■□□□ 1.97
SQLE-206ENST00000523430 PHF8Q9UPP1 1060 aa27.38■■□□□ 1.97
SQLE-206ENST00000523430 NEUROD2Q15784 382 aa27.37■■□□□ 1.97
SQLE-206ENST00000523430 SPINK5Q9NQ38 1064 aaPredicted RBP27.37■■□□□ 1.97
SQLE-206ENST00000523430 SLFN5Q08AF3 891 aa27.36■■□□□ 1.97
SQLE-206ENST00000523430 WWC1Q8IX03 1113 aa27.36■■□□□ 1.97
SQLE-206ENST00000523430 USP54Q70EL1 1684 aa27.36■■□□□ 1.97
SQLE-206ENST00000523430 STRCQ7RTU9 1775 aa27.35■■□□□ 1.97
SQLE-206ENST00000523430 PHF23Q9BUL5 403 aaPredicted RBP27.34■■□□□ 1.97
SQLE-206ENST00000523430 IL13P35225 146 aa27.33■■□□□ 1.97
SQLE-206ENST00000523430 SOX12O15370 315 aa27.32■■□□□ 1.96
SQLE-206ENST00000523430 ESCO1Q5FWF5 840 aa27.32■■□□□ 1.96
SQLE-206ENST00000523430 TRMT2AQ8IZ69 625 aaKnown RBP27.32■■□□□ 1.96
SQLE-206ENST00000523430 TMEM94Q12767 1356 aa27.3■■□□□ 1.96
SQLE-206ENST00000523430 RRP1P56182 461 aaKnown RBP27.3■■□□□ 1.96
SQLE-206ENST00000523430 MAPK8IP3Q9UPT6 1336 aa27.3■■□□□ 1.96
SQLE-206ENST00000523430 E9PSI1 815 aa27.3■■□□□ 1.96
SQLE-206ENST00000523430 RSPH6AQ9H0K4 717 aa27.3■■□□□ 1.96
SQLE-206ENST00000523430 CCDC27Q2M243 656 aa27.29■■□□□ 1.96
SQLE-206ENST00000523430 ERICH6BQ5W0A0 696 aa27.27■■□□□ 1.96
SQLE-206ENST00000523430 ORAI2Q96SN7 254 aa27.27■■□□□ 1.96
SQLE-206ENST00000523430 PAK3O75914 559 aaPredicted RBP27.27■■□□□ 1.96
SQLE-206ENST00000523430 NUTM2GQ5VZR2 741 aa27.27■■□□□ 1.96
SQLE-206ENST00000523430 FCHSD2O94868 740 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 HMOX1P09601 288 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 PRKAR2BP31323 418 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 NLRP6P59044 892 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 MAP3K19Q56UN5 1328 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 C1orf167Q5SNV9 1468 aa27.26■■□□□ 1.95
SQLE-206ENST00000523430 NCBP3Q53F19 620 aaKnown RBP27.25■■□□□ 1.95
SQLE-206ENST00000523430 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
SQLE-206ENST00000523430 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
SQLE-206ENST00000523430 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
SQLE-206ENST00000523430 ABTB2Q8N961 1025 aa27.24■■□□□ 1.95
SQLE-206ENST00000523430 EIF4A2Q14240 407 aaKnown RBP27.23■■□□□ 1.95
SQLE-206ENST00000523430 PNNQ9H307 717 aaKnown RBP27.23■■□□□ 1.95
SQLE-206ENST00000523430 RGPD1P0DJD0 1748 aa27.23■■□□□ 1.95
SQLE-206ENST00000523430 HSP90AB2PQ58FF8 381 aa27.22■■□□□ 1.95
SQLE-206ENST00000523430 DCCP43146 1447 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 MST1RQ04912 1400 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 SBNO1A3KN83 1393 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 PSME1Q06323 249 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 WDR63Q8IWG1 891 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 NCOA3Q9Y6Q9 1424 aa27.21■■□□□ 1.95
SQLE-206ENST00000523430 FLT4P35916 1363 aa27.2■■□□□ 1.95
SQLE-206ENST00000523430 TRIM35Q9UPQ4 493 aa27.2■■□□□ 1.94
SQLE-206ENST00000523430 XIRP1Q702N8 1843 aaKnown RBP27.2■■□□□ 1.94
SQLE-206ENST00000523430 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms