RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.05	□□□□□ -0.16
VIRMA-208	ENST00000523263	EZH2	Q15910	746 aa	Known RBP	14.05	□□□□□ -0.16
VIRMA-208	ENST00000523263	WASL	O00401	505 aa	Predicted RBP	14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	PRDM11	Q9NQV5	511 aa		14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	SPATA31A1	Q5TZJ5	1347 aa		14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	PRR36	Q9H6K5	1346 aa		14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	THSD7A	Q9UPZ6	1657 aa		14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	RGPD1	P0DJD0	1748 aa		14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.04	□□□□□ -0.16
VIRMA-208	ENST00000523263	FAM182B	Q5T319	152 aa		14.03	□□□□□ -0.16
VIRMA-208	ENST00000523263	STAC3	Q96MF2	364 aa		14.03	□□□□□ -0.16
VIRMA-208	ENST00000523263	ALS2	Q96Q42	1657 aa		14.03	□□□□□ -0.16
VIRMA-208	ENST00000523263	RGPD8	O14715	1765 aa	Predicted RBP	14.02	□□□□□ -0.16
VIRMA-208	ENST00000523263	TULP4	Q9NRJ4	1543 aa		14.02	□□□□□ -0.16
VIRMA-208	ENST00000523263	BARGIN	Q6ZT62	677 aa		14.02	□□□□□ -0.17
VIRMA-208	ENST00000523263	NGDN	Q8NEJ9	315 aa	Known RBP	14.02	□□□□□ -0.17
VIRMA-208	ENST00000523263	ADGRB1	O14514	1584 aa		14.01	□□□□□ -0.17
VIRMA-208	ENST00000523263	TRIM37	O94972	964 aa		14	□□□□□ -0.17
VIRMA-208	ENST00000523263	TRAK1	Q9UPV9	953 aa		14	□□□□□ -0.17
VIRMA-208	ENST00000523263	C11orf95	C9JLR9	678 aa	Predicted RBP	13.99	□□□□□ -0.17
VIRMA-208	ENST00000523263	APBA3	O96018	575 aa		13.99	□□□□□ -0.17
VIRMA-208	ENST00000523263	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.99	□□□□□ -0.17
VIRMA-208	ENST00000523263	KIAA0232	Q92628	1395 aa		13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	PAK3	O75914	559 aa	Predicted RBP	13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	NBPF8	Q3BBV2	869 aa		13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	NBPF14	Q5TI25	921 aa		13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	TNS1	Q9HBL0	1735 aa	Known RBP	13.98	□□□□□ -0.17
VIRMA-208	ENST00000523263	ATP7B	P35670	1465 aa		13.97	□□□□□ -0.17
VIRMA-208	ENST00000523263	CRYBG1	Q9Y4K1	1723 aa		13.96	□□□□□ -0.17
VIRMA-208	ENST00000523263	YY1	P25490	414 aa		13.96	□□□□□ -0.17
VIRMA-208	ENST00000523263	PDE3B	Q13370	1112 aa		13.96	□□□□□ -0.17
VIRMA-208	ENST00000523263	NUDT16	Q96DE0	195 aa	Known RBP	13.96	□□□□□ -0.17
VIRMA-208	ENST00000523263	THRAP3	Q9Y2W1	955 aa	Known RBP	13.96	□□□□□ -0.17
VIRMA-208	ENST00000523263	CHRNA2	Q15822	529 aa		13.95	□□□□□ -0.18
VIRMA-208	ENST00000523263	STRN4	Q9NRL3	753 aa		13.95	□□□□□ -0.18
VIRMA-208	ENST00000523263	SSH2	Q76I76	1423 aa		13.95	□□□□□ -0.18
VIRMA-208	ENST00000523263	POLR3A	O14802	1390 aa	Predicted RBP	13.95	□□□□□ -0.18
VIRMA-208	ENST00000523263	PLEKHG3	A1L390	1219 aa		13.94	□□□□□ -0.18
VIRMA-208	ENST00000523263	EVA1C	P58658	441 aa		13.94	□□□□□ -0.18
VIRMA-208	ENST00000523263	TCP11L2	Q8N4U5	519 aa		13.94	□□□□□ -0.18
VIRMA-208	ENST00000523263	SPON1	Q9HCB6	807 aa		13.94	□□□□□ -0.18
VIRMA-208	ENST00000523263	CPD	O75976	1380 aa		13.94	□□□□□ -0.18
VIRMA-208	ENST00000523263	KCNQ2	O43526	872 aa		13.93	□□□□□ -0.18
VIRMA-208	ENST00000523263	ZC3H6	P61129	1189 aa	Known RBP	13.93	□□□□□ -0.18
VIRMA-208	ENST00000523263	CCDC61	Q9Y6R9	512 aa		13.92	□□□□□ -0.18
VIRMA-208	ENST00000523263	NINL	Q9Y2I6	1382 aa		13.92	□□□□□ -0.18
VIRMA-208	ENST00000523263	DCAF8L1	A6NGE4	600 aa		13.91	□□□□□ -0.18
VIRMA-208	ENST00000523263	PLSCR1	O15162	318 aa		13.91	□□□□□ -0.18
VIRMA-208	ENST00000523263	LARP1	Q6PKG0	1096 aa	Known RBP	13.91	□□□□□ -0.18
VIRMA-208	ENST00000523263	DCAF11	Q8TEB1	546 aa		13.91	□□□□□ -0.18
VIRMA-208	ENST00000523263	USP19	O94966	1318 aa		13.9	□□□□□ -0.18
VIRMA-208	ENST00000523263	ACE	P12821	1306 aa		13.9	□□□□□ -0.18
VIRMA-208	ENST00000523263	CDK19	Q9BWU1	502 aa		13.9	□□□□□ -0.18
VIRMA-208	ENST00000523263	USP35	Q9P2H5	1018 aa		13.9	□□□□□ -0.18
VIRMA-208	ENST00000523263	RREB1	Q92766	1687 aa		13.9	□□□□□ -0.18
VIRMA-208	ENST00000523263	CAMTA1	Q9Y6Y1	1673 aa		13.89	□□□□□ -0.19
VIRMA-208	ENST00000523263	BRD4	O60885	1362 aa	Predicted RBP	13.89	□□□□□ -0.19
VIRMA-208	ENST00000523263	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.89	□□□□□ -0.19
VIRMA-208	ENST00000523263	KDM2A	Q9Y2K7	1162 aa		13.89	□□□□□ -0.19
VIRMA-208	ENST00000523263	NLRP13	Q86W25	1043 aa		13.88	□□□□□ -0.19
VIRMA-208	ENST00000523263	ABTB2	Q8N961	1025 aa		13.88	□□□□□ -0.19
VIRMA-208	ENST00000523263	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.87	□□□□□ -0.19
VIRMA-208	ENST00000523263	GC	P02774	474 aa		13.87	□□□□□ -0.19
VIRMA-208	ENST00000523263	NUTM2G	Q5VZR2	741 aa		13.87	□□□□□ -0.19
VIRMA-208	ENST00000523263	NUP188	Q5SRE5	1749 aa		13.86	□□□□□ -0.19
VIRMA-208	ENST00000523263	LMO7	Q8WWI1	1683 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	ITSN1	Q15811	1721 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	OVOS2	A0A0G2JMS6	1433 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	OVOS2	A0A0J9YW53	1432 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	BCL9	O00512	1426 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	OVOS2	Q6IE36	1432 aa		13.85	□□□□□ -0.19
VIRMA-208	ENST00000523263	NRK	Q7Z2Y5	1582 aa		13.84	□□□□□ -0.19
VIRMA-208	ENST00000523263	CRB1	P82279	1406 aa		13.84	□□□□□ -0.19
VIRMA-208	ENST00000523263	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.84	□□□□□ -0.19
VIRMA-208	ENST00000523263	COL5A2	P05997	1499 aa	Predicted RBP	13.84	□□□□□ -0.19
VIRMA-208	ENST00000523263	AATK	Q6ZMQ8	1374 aa		13.83	□□□□□ -0.19
VIRMA-208	ENST00000523263	RAB3GAP2	Q9H2M9	1393 aa		13.83	□□□□□ -0.19
VIRMA-208	ENST00000523263	PARP4	Q9UKK3	1724 aa	Known RBP	13.82	□□□□□ -0.2
VIRMA-208	ENST00000523263	DDB1	Q16531	1140 aa		13.82	□□□□□ -0.2
VIRMA-208	ENST00000523263	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.82	□□□□□ -0.2
VIRMA-208	ENST00000523263	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.81	□□□□□ -0.2
VIRMA-208	ENST00000523263	TOPAZ1	Q8N9V7	1692 aa		13.81	□□□□□ -0.2
VIRMA-208	ENST00000523263	PROM2	Q8N271	834 aa		13.8	□□□□□ -0.2
VIRMA-208	ENST00000523263	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.8	□□□□□ -0.2
VIRMA-208	ENST00000523263	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.8	□□□□□ -0.2
VIRMA-208	ENST00000523263	RGPD4	Q7Z3J3	1758 aa		13.8	□□□□□ -0.2
VIRMA-208	ENST00000523263	PEAK1	Q9H792	1746 aa		13.79	□□□□□ -0.2
VIRMA-208	ENST00000523263	PTGER2	P43116	358 aa		13.79	□□□□□ -0.2
VIRMA-208	ENST00000523263	PPIP5K1	Q6PFW1	1433 aa		13.78	□□□□□ -0.2
VIRMA-208	ENST00000523263	NLRP6	P59044	892 aa		13.77	□□□□□ -0.21
VIRMA-208	ENST00000523263	TOM1L2	Q6ZVM7	507 aa		13.77	□□□□□ -0.21
VIRMA-208	ENST00000523263	WDR17	Q8IZU2	1322 aa		13.77	□□□□□ -0.21
VIRMA-208	ENST00000523263	MARCH10	Q8NA82	808 aa	Predicted RBP	13.77	□□□□□ -0.21
VIRMA-208	ENST00000523263	SLIT3	O75094	1523 aa		13.76	□□□□□ -0.21
VIRMA-208	ENST00000523263	USP6	P35125	1406 aa		13.76	□□□□□ -0.21
VIRMA-208	ENST00000523263	SRPK2	P78362	688 aa	Known RBP	13.76	□□□□□ -0.21
VIRMA-208	ENST00000523263	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.76	□□□□□ -0.21
VIRMA-208	ENST00000523263	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.75	□□□□□ -0.21
VIRMA-208	ENST00000523263	SLC15A2	Q16348	729 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms