RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 CENPJQ9HC77 1338 aaPredicted RBP22.39■■□□□ 1.18
ARFGAP1-216ENST00000522959 GJD4Q96KN9 370 aaPredicted RBP22.39■■□□□ 1.17
ARFGAP1-216ENST00000522959 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
ARFGAP1-216ENST00000522959 ACEP12821 1306 aa22.38■■□□□ 1.17
ARFGAP1-216ENST00000522959 CABP2Q9NPB3 220 aa22.38■■□□□ 1.17
ARFGAP1-216ENST00000522959 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
ARFGAP1-216ENST00000522959 PLEKHG3A1L390 1219 aa22.37■■□□□ 1.17
ARFGAP1-216ENST00000522959 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
ARFGAP1-216ENST00000522959 PHRF1Q9P1Y6 1649 aaKnown RBP22.36■■□□□ 1.17
ARFGAP1-216ENST00000522959 CCDC61Q9Y6R9 512 aa22.36■■□□□ 1.17
ARFGAP1-216ENST00000522959 PAK3O75914 559 aaPredicted RBP22.35■■□□□ 1.17
ARFGAP1-216ENST00000522959 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
ARFGAP1-216ENST00000522959 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.17
ARFGAP1-216ENST00000522959 NUTM2GQ5VZR2 741 aa22.33■■□□□ 1.17
ARFGAP1-216ENST00000522959 ROCK2O75116 1388 aaKnown RBP22.32■■□□□ 1.16
ARFGAP1-216ENST00000522959 PPIP5K1Q6PFW1 1433 aa22.31■■□□□ 1.16
ARFGAP1-216ENST00000522959 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
ARFGAP1-216ENST00000522959 VPS72Q15906 364 aa22.3■■□□□ 1.16
ARFGAP1-216ENST00000522959 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
ARFGAP1-216ENST00000522959 CABP1Q9NZU7 370 aa22.28■■□□□ 1.16
ARFGAP1-216ENST00000522959 AKAP12Q02952 1782 aa22.26■■□□□ 1.15
ARFGAP1-216ENST00000522959 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
ARFGAP1-216ENST00000522959 ONECUT3O60422 494 aaPredicted RBP22.25■■□□□ 1.15
ARFGAP1-216ENST00000522959 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
ARFGAP1-216ENST00000522959 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
ARFGAP1-216ENST00000522959 ATAD2Q6PL18 1390 aa22.24■■□□□ 1.15
ARFGAP1-216ENST00000522959 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
ARFGAP1-216ENST00000522959 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
ARFGAP1-216ENST00000522959 SSH2Q76I76 1423 aa22.23■■□□□ 1.15
ARFGAP1-216ENST00000522959 ABTB2Q8N961 1025 aa22.22■■□□□ 1.15
ARFGAP1-216ENST00000522959 PIK3C2AO00443 1686 aa22.22■■□□□ 1.15
ARFGAP1-216ENST00000522959 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
ARFGAP1-216ENST00000522959 USP19O94966 1318 aa22.21■■□□□ 1.15
ARFGAP1-216ENST00000522959 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
ARFGAP1-216ENST00000522959 USP6P35125 1406 aa22.21■■□□□ 1.15
ARFGAP1-216ENST00000522959 LMO7Q8WWI1 1683 aa22.2■■□□□ 1.15
ARFGAP1-216ENST00000522959 PRDM11Q9NQV5 511 aa22.2■■□□□ 1.14
ARFGAP1-216ENST00000522959 TONSLQ96HA7 1378 aa22.2■■□□□ 1.14
ARFGAP1-216ENST00000522959 CAMTA1Q9Y6Y1 1673 aa22.19■■□□□ 1.14
ARFGAP1-216ENST00000522959 SPATA31A5Q5VU36 1347 aa22.18■■□□□ 1.14
ARFGAP1-216ENST00000522959 SPATA31A7Q8IWB4 1347 aa22.18■■□□□ 1.14
ARFGAP1-216ENST00000522959 FAM98CQ17RN3 349 aaKnown RBP22.18■■□□□ 1.14
ARFGAP1-216ENST00000522959 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
ARFGAP1-216ENST00000522959 THSD7AQ9UPZ6 1657 aa22.17■■□□□ 1.14
ARFGAP1-216ENST00000522959 COL18A1P39060 1754 aa22.16■■□□□ 1.14
ARFGAP1-216ENST00000522959 RGPD5Q99666 1765 aa22.16■■□□□ 1.14
ARFGAP1-216ENST00000522959 SRCAPQ6ZRS2 3230 aa22.15■■□□□ 1.14
ARFGAP1-216ENST00000522959 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
ARFGAP1-216ENST00000522959 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.14
ARFGAP1-216ENST00000522959 GCP02774 474 aa22.14■■□□□ 1.13
ARFGAP1-216ENST00000522959 SLIT3O75094 1523 aa22.14■■□□□ 1.13
ARFGAP1-216ENST00000522959 CD163L1Q9NR16 1453 aa22.14■■□□□ 1.13
ARFGAP1-216ENST00000522959 SBNO2Q9Y2G9 1366 aa22.13■■□□□ 1.13
ARFGAP1-216ENST00000522959 FAM182BQ5T319 152 aa22.12■■□□□ 1.13
ARFGAP1-216ENST00000522959 NLRP13Q86W25 1043 aa22.12■■□□□ 1.13
ARFGAP1-216ENST00000522959 STRN4Q9NRL3 753 aa22.12■■□□□ 1.13
ARFGAP1-216ENST00000522959 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
ARFGAP1-216ENST00000522959 CPDO75976 1380 aa22.12■■□□□ 1.13
ARFGAP1-216ENST00000522959 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
ARFGAP1-216ENST00000522959 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
ARFGAP1-216ENST00000522959 NLRP6P59044 892 aa22.11■■□□□ 1.13
ARFGAP1-216ENST00000522959 KRT27Q7Z3Y8 459 aa22.11■■□□□ 1.13
ARFGAP1-216ENST00000522959 LARP1Q6PKG0 1096 aaKnown RBP22.09■■□□□ 1.13
ARFGAP1-216ENST00000522959 TESK2Q96S53 571 aa22.09■■□□□ 1.13
ARFGAP1-216ENST00000522959 ZRANB1Q9UGI0 708 aa22.09■■□□□ 1.13
ARFGAP1-216ENST00000522959 DEFB132Q7Z7B7 95 aa22.07■■□□□ 1.12
ARFGAP1-216ENST00000522959 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
ARFGAP1-216ENST00000522959 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
ARFGAP1-216ENST00000522959 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
ARFGAP1-216ENST00000522959 SLC12A5Q9H2X9 1139 aa22.06■■□□□ 1.12
ARFGAP1-216ENST00000522959 COL5A2P05997 1499 aaPredicted RBP22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 A0A0G2JS52 829 aa22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 MYT1Q01538 1121 aa22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 CCDC125Q86Z20 511 aa22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
ARFGAP1-216ENST00000522959 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
ARFGAP1-216ENST00000522959 NFAT5O94916 1531 aa22.03■■□□□ 1.12
ARFGAP1-216ENST00000522959 ZBTB7CA1YPR0 619 aa22.02■■□□□ 1.12
ARFGAP1-216ENST00000522959 EVA1CP58658 441 aa22.02■■□□□ 1.12
ARFGAP1-216ENST00000522959 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
ARFGAP1-216ENST00000522959 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
ARFGAP1-216ENST00000522959 ARHGEF25Q86VW2 580 aa22■■□□□ 1.11
ARFGAP1-216ENST00000522959 NME9Q86XW9 330 aa22■■□□□ 1.11
ARFGAP1-216ENST00000522959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22■■□□□ 1.11
ARFGAP1-216ENST00000522959 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
ARFGAP1-216ENST00000522959 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
ARFGAP1-216ENST00000522959 SOX12O15370 315 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 BARGINQ6ZT62 677 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 RGPD1P0DJD0 1748 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 LTN1O94822 1766 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
ARFGAP1-216ENST00000522959 PARP4Q9UKK3 1724 aaKnown RBP21.98■■□□□ 1.11
ARFGAP1-216ENST00000522959 A0A1W2PP64 1363 aa21.98■■□□□ 1.11
ARFGAP1-216ENST00000522959 USP31Q70CQ4 1352 aa21.97■■□□□ 1.11
ARFGAP1-216ENST00000522959 TCP11L2Q8N4U5 519 aa21.96■■□□□ 1.11
ARFGAP1-216ENST00000522959 PUS7Q96PZ0 661 aaKnown RBP21.95■■□□□ 1.1
ARFGAP1-216ENST00000522959 CRB1P82279 1406 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms