RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
SDC2-207ENST00000522911 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
SDC2-207ENST00000522911 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
SDC2-207ENST00000522911 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
SDC2-207ENST00000522911 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
SDC2-207ENST00000522911 KIAA1210Q9ULL0 1709 aa13.75□□□□□ -0.21
SDC2-207ENST00000522911 DISP2A7MBM2 1401 aa13.74□□□□□ -0.21
SDC2-207ENST00000522911 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
SDC2-207ENST00000522911 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
SDC2-207ENST00000522911 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
SDC2-207ENST00000522911 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
SDC2-207ENST00000522911 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
SDC2-207ENST00000522911 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
SDC2-207ENST00000522911 THSD7AQ9UPZ6 1657 aa13.72□□□□□ -0.21
SDC2-207ENST00000522911 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
SDC2-207ENST00000522911 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
SDC2-207ENST00000522911 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
SDC2-207ENST00000522911 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
SDC2-207ENST00000522911 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
SDC2-207ENST00000522911 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SDC2-207ENST00000522911 TOPAZ1Q8N9V7 1692 aa13.71□□□□□ -0.21
SDC2-207ENST00000522911 BAG6P46379 1132 aa13.7□□□□□ -0.22
SDC2-207ENST00000522911 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
SDC2-207ENST00000522911 LRP5O75197 1615 aa13.7□□□□□ -0.22
SDC2-207ENST00000522911 CPDO75976 1380 aa13.7□□□□□ -0.22
SDC2-207ENST00000522911 SPATA31A1Q5TZJ5 1347 aa13.69□□□□□ -0.22
SDC2-207ENST00000522911 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
SDC2-207ENST00000522911 KIAA0232Q92628 1395 aa13.69□□□□□ -0.22
SDC2-207ENST00000522911 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
SDC2-207ENST00000522911 USP19O94966 1318 aa13.68□□□□□ -0.22
SDC2-207ENST00000522911 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
SDC2-207ENST00000522911 ACEP12821 1306 aa13.67□□□□□ -0.22
SDC2-207ENST00000522911 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
SDC2-207ENST00000522911 BARGINQ6ZT62 677 aa13.67□□□□□ -0.22
SDC2-207ENST00000522911 RGPD1P0DJD0 1748 aa13.67□□□□□ -0.22
SDC2-207ENST00000522911 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
SDC2-207ENST00000522911 LMO7Q8WWI1 1683 aa13.64□□□□□ -0.23
SDC2-207ENST00000522911 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
SDC2-207ENST00000522911 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
SDC2-207ENST00000522911 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
SDC2-207ENST00000522911 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
SDC2-207ENST00000522911 A0A0G2JS52 829 aa13.63□□□□□ -0.23
SDC2-207ENST00000522911 MYT1Q01538 1121 aa13.63□□□□□ -0.23
SDC2-207ENST00000522911 NBPF1Q3BBV0 1214 aa13.63□□□□□ -0.23
SDC2-207ENST00000522911 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
SDC2-207ENST00000522911 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
SDC2-207ENST00000522911 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
SDC2-207ENST00000522911 C11orf95C9JLR9 678 aaPredicted RBP13.62□□□□□ -0.23
SDC2-207ENST00000522911 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
SDC2-207ENST00000522911 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
SDC2-207ENST00000522911 CHRNA2Q15822 529 aa13.61□□□□□ -0.23
SDC2-207ENST00000522911 ABTB2Q8N961 1025 aa13.61□□□□□ -0.23
SDC2-207ENST00000522911 CAMKK2Q96RR4 588 aa13.61□□□□□ -0.23
SDC2-207ENST00000522911 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
SDC2-207ENST00000522911 GCP02774 474 aa13.6□□□□□ -0.23
SDC2-207ENST00000522911 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
SDC2-207ENST00000522911 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
SDC2-207ENST00000522911 USP6P35125 1406 aa13.59□□□□□ -0.23
SDC2-207ENST00000522911 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
SDC2-207ENST00000522911 SLIT3O75094 1523 aa13.59□□□□□ -0.23
SDC2-207ENST00000522911 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.23
SDC2-207ENST00000522911 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
SDC2-207ENST00000522911 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
SDC2-207ENST00000522911 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
SDC2-207ENST00000522911 EVA1CP58658 441 aa13.57□□□□□ -0.24
SDC2-207ENST00000522911 FAM182BQ5T319 152 aa13.57□□□□□ -0.24
SDC2-207ENST00000522911 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
SDC2-207ENST00000522911 CRB1P82279 1406 aa13.56□□□□□ -0.24
SDC2-207ENST00000522911 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
SDC2-207ENST00000522911 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
SDC2-207ENST00000522911 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
SDC2-207ENST00000522911 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
SDC2-207ENST00000522911 TRIM37O94972 964 aa13.55□□□□□ -0.24
SDC2-207ENST00000522911 EZH2Q15910 746 aaKnown RBP13.55□□□□□ -0.24
SDC2-207ENST00000522911 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
SDC2-207ENST00000522911 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
SDC2-207ENST00000522911 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
SDC2-207ENST00000522911 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
SDC2-207ENST00000522911 BCL9O00512 1426 aa13.55□□□□□ -0.24
SDC2-207ENST00000522911 RREB1Q92766 1687 aa13.54□□□□□ -0.24
SDC2-207ENST00000522911 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
SDC2-207ENST00000522911 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
SDC2-207ENST00000522911 SBNO2Q9Y2G9 1366 aa13.54□□□□□ -0.24
SDC2-207ENST00000522911 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
SDC2-207ENST00000522911 APBA3O96018 575 aa13.53□□□□□ -0.24
SDC2-207ENST00000522911 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
SDC2-207ENST00000522911 ABCC6O95255 1503 aa13.53□□□□□ -0.24
SDC2-207ENST00000522911 NLRP6P59044 892 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.25
SDC2-207ENST00000522911 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 PEAK1Q9H792 1746 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 RGPD3A6NKT7 1758 aaPredicted RBP13.52□□□□□ -0.25
SDC2-207ENST00000522911 RGPD4Q7Z3J3 1758 aa13.52□□□□□ -0.25
SDC2-207ENST00000522911 COL18A1P39060 1754 aa13.51□□□□□ -0.25
SDC2-207ENST00000522911 PLSCR1O15162 318 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms