RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 PHRF1Q9P1Y6 1649 aaKnown RBP20.5■□□□□ 0.87
HMBOX1-209ENST00000522468 SEPT12Q8IYM1 358 aa20.5■□□□□ 0.87
HMBOX1-209ENST00000522468 POLR3AO14802 1390 aaPredicted RBP20.49■□□□□ 0.87
HMBOX1-209ENST00000522468 NGDNQ8NEJ9 315 aaKnown RBP20.49■□□□□ 0.87
HMBOX1-209ENST00000522468 BLMP54132 1417 aaPredicted RBP20.49■□□□□ 0.87
HMBOX1-209ENST00000522468 NBPF1Q3BBV0 1214 aa20.48■□□□□ 0.87
HMBOX1-209ENST00000522468 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
HMBOX1-209ENST00000522468 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
HMBOX1-209ENST00000522468 THSD7AQ9UPZ6 1657 aa20.45■□□□□ 0.86
HMBOX1-209ENST00000522468 PLEKHG3A1L390 1219 aa20.44■□□□□ 0.86
HMBOX1-209ENST00000522468 PAK3O75914 559 aaPredicted RBP20.43■□□□□ 0.86
HMBOX1-209ENST00000522468 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
HMBOX1-209ENST00000522468 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
HMBOX1-209ENST00000522468 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
HMBOX1-209ENST00000522468 KRT27Q7Z3Y8 459 aa20.42■□□□□ 0.86
HMBOX1-209ENST00000522468 ACEP12821 1306 aa20.42■□□□□ 0.86
HMBOX1-209ENST00000522468 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
HMBOX1-209ENST00000522468 SPATA31A5Q5VU36 1347 aa20.41■□□□□ 0.86
HMBOX1-209ENST00000522468 SPATA31A7Q8IWB4 1347 aa20.41■□□□□ 0.86
HMBOX1-209ENST00000522468 NRKQ7Z2Y5 1582 aa20.41■□□□□ 0.86
HMBOX1-209ENST00000522468 FAM98CQ17RN3 349 aaKnown RBP20.4■□□□□ 0.86
HMBOX1-209ENST00000522468 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
HMBOX1-209ENST00000522468 KIAA0232Q92628 1395 aa20.4■□□□□ 0.86
HMBOX1-209ENST00000522468 ZRANB1Q9UGI0 708 aa20.4■□□□□ 0.86
HMBOX1-209ENST00000522468 PRDM11Q9NQV5 511 aa20.39■□□□□ 0.85
HMBOX1-209ENST00000522468 CENPJQ9HC77 1338 aaPredicted RBP20.38■□□□□ 0.85
HMBOX1-209ENST00000522468 DEFB132Q7Z7B7 95 aa20.38■□□□□ 0.85
HMBOX1-209ENST00000522468 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
HMBOX1-209ENST00000522468 L3MBTL2Q969R5 705 aa20.37■□□□□ 0.85
HMBOX1-209ENST00000522468 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
HMBOX1-209ENST00000522468 USP19O94966 1318 aa20.36■□□□□ 0.85
HMBOX1-209ENST00000522468 NUTM2GQ5VZR2 741 aa20.35■□□□□ 0.85
HMBOX1-209ENST00000522468 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
HMBOX1-209ENST00000522468 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
HMBOX1-209ENST00000522468 TNS1Q9HBL0 1735 aaKnown RBP20.34■□□□□ 0.85
HMBOX1-209ENST00000522468 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
HMBOX1-209ENST00000522468 CPDO75976 1380 aa20.34■□□□□ 0.85
HMBOX1-209ENST00000522468 CAMTA1Q9Y6Y1 1673 aa20.33■□□□□ 0.85
HMBOX1-209ENST00000522468 CABP2Q9NPB3 220 aa20.33■□□□□ 0.85
HMBOX1-209ENST00000522468 ZC3H6P61129 1189 aaKnown RBP20.32■□□□□ 0.84
HMBOX1-209ENST00000522468 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
HMBOX1-209ENST00000522468 SIN3AQ96ST3 1273 aa20.32■□□□□ 0.84
HMBOX1-209ENST00000522468 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
HMBOX1-209ENST00000522468 ABTB2Q8N961 1025 aa20.31■□□□□ 0.84
HMBOX1-209ENST00000522468 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
HMBOX1-209ENST00000522468 A0A0G2JS52 829 aa20.3■□□□□ 0.84
HMBOX1-209ENST00000522468 MYT1Q01538 1121 aa20.3■□□□□ 0.84
HMBOX1-209ENST00000522468 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
HMBOX1-209ENST00000522468 USP6P35125 1406 aa20.29■□□□□ 0.84
HMBOX1-209ENST00000522468 PIK3C2AO00443 1686 aa20.29■□□□□ 0.84
HMBOX1-209ENST00000522468 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
HMBOX1-209ENST00000522468 SLIT3O75094 1523 aa20.28■□□□□ 0.84
HMBOX1-209ENST00000522468 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
HMBOX1-209ENST00000522468 AKAP12Q02952 1782 aa20.27■□□□□ 0.84
HMBOX1-209ENST00000522468 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
HMBOX1-209ENST00000522468 GCP02774 474 aa20.26■□□□□ 0.83
HMBOX1-209ENST00000522468 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
HMBOX1-209ENST00000522468 LRP5O75197 1615 aa20.25■□□□□ 0.83
HMBOX1-209ENST00000522468 BAG6P46379 1132 aa20.25■□□□□ 0.83
HMBOX1-209ENST00000522468 BARGINQ6ZT62 677 aa20.25■□□□□ 0.83
HMBOX1-209ENST00000522468 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
HMBOX1-209ENST00000522468 COL18A1P39060 1754 aa20.25■□□□□ 0.83
HMBOX1-209ENST00000522468 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
HMBOX1-209ENST00000522468 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
HMBOX1-209ENST00000522468 ROCK2O75116 1388 aaKnown RBP20.23■□□□□ 0.83
HMBOX1-209ENST00000522468 LARP1Q6PKG0 1096 aaKnown RBP20.23■□□□□ 0.83
HMBOX1-209ENST00000522468 EVC2Q86UK5 1308 aa20.23■□□□□ 0.83
HMBOX1-209ENST00000522468 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
HMBOX1-209ENST00000522468 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
HMBOX1-209ENST00000522468 EVA1CP58658 441 aa20.2■□□□□ 0.82
HMBOX1-209ENST00000522468 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
HMBOX1-209ENST00000522468 AATKQ6ZMQ8 1374 aa20.2■□□□□ 0.82
HMBOX1-209ENST00000522468 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
HMBOX1-209ENST00000522468 TCP11L2Q8N4U5 519 aa20.19■□□□□ 0.82
HMBOX1-209ENST00000522468 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
HMBOX1-209ENST00000522468 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
HMBOX1-209ENST00000522468 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
HMBOX1-209ENST00000522468 NLRP6P59044 892 aa20.18■□□□□ 0.82
HMBOX1-209ENST00000522468 RREB1Q92766 1687 aa20.18■□□□□ 0.82
HMBOX1-209ENST00000522468 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
HMBOX1-209ENST00000522468 THRAP3Q9Y2W1 955 aaKnown RBP20.17■□□□□ 0.82
HMBOX1-209ENST00000522468 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
HMBOX1-209ENST00000522468 CRB1P82279 1406 aa20.17■□□□□ 0.82
HMBOX1-209ENST00000522468 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
HMBOX1-209ENST00000522468 TTC21BQ7Z4L5 1316 aa20.16■□□□□ 0.82
HMBOX1-209ENST00000522468 LRRC37A3O60309 1634 aa20.16■□□□□ 0.82
HMBOX1-209ENST00000522468 RGPD5Q99666 1765 aa20.16■□□□□ 0.82
HMBOX1-209ENST00000522468 TRIM37O94972 964 aa20.15■□□□□ 0.82
HMBOX1-209ENST00000522468 ZNF692Q9BU19 519 aaPredicted RBP20.15■□□□□ 0.82
HMBOX1-209ENST00000522468 USP54Q70EL1 1684 aa20.15■□□□□ 0.82
HMBOX1-209ENST00000522468 NFAT5O94916 1531 aa20.14■□□□□ 0.81
HMBOX1-209ENST00000522468 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
HMBOX1-209ENST00000522468 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
HMBOX1-209ENST00000522468 NUP188Q5SRE5 1749 aa20.13■□□□□ 0.81
HMBOX1-209ENST00000522468 PARD3Q8TEW0 1356 aa20.13■□□□□ 0.81
HMBOX1-209ENST00000522468 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
HMBOX1-209ENST00000522468 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
HMBOX1-209ENST00000522468 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
HMBOX1-209ENST00000522468 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
HMBOX1-209ENST00000522468 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms