RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PLCH1Q4KWH8 1693 aa13.36□□□□□ -0.27
CLK4-209ENST00000521621 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
CLK4-209ENST00000521621 USP19O94966 1318 aa13.35□□□□□ -0.27
CLK4-209ENST00000521621 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
CLK4-209ENST00000521621 RGS17Q9UGC6 210 aaPredicted RBP13.35□□□□□ -0.27
CLK4-209ENST00000521621 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
CLK4-209ENST00000521621 PIK3C2AO00443 1686 aa13.35□□□□□ -0.27
CLK4-209ENST00000521621 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
CLK4-209ENST00000521621 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 MYOM1P52179 1685 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 USP31Q70CQ4 1352 aa13.34□□□□□ -0.27
CLK4-209ENST00000521621 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.27
CLK4-209ENST00000521621 ST20-MTHFSA0A0A6YYL1 179 aa13.33□□□□□ -0.28
CLK4-209ENST00000521621 CPDO75976 1380 aa13.33□□□□□ -0.28
CLK4-209ENST00000521621 ATRNO75882 1429 aa13.32□□□□□ -0.28
CLK4-209ENST00000521621 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
CLK4-209ENST00000521621 TMF1P82094 1093 aa13.32□□□□□ -0.28
CLK4-209ENST00000521621 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
CLK4-209ENST00000521621 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
CLK4-209ENST00000521621 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
CLK4-209ENST00000521621 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
CLK4-209ENST00000521621 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
CLK4-209ENST00000521621 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
CLK4-209ENST00000521621 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
CLK4-209ENST00000521621 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
CLK4-209ENST00000521621 AFF2P51816 1311 aa13.28□□□□□ -0.28
CLK4-209ENST00000521621 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
CLK4-209ENST00000521621 COL18A1P39060 1754 aa13.27□□□□□ -0.28
CLK4-209ENST00000521621 EIF4G2P78344 907 aaKnown RBP eCLIP13.27□□□□□ -0.28
CLK4-209ENST00000521621 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.28
CLK4-209ENST00000521621 NFAT5O94916 1531 aa13.27□□□□□ -0.28
CLK4-209ENST00000521621 NLRP13Q86W25 1043 aa13.26□□□□□ -0.29
CLK4-209ENST00000521621 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
CLK4-209ENST00000521621 A0A1W2PP64 1363 aa13.25□□□□□ -0.29
CLK4-209ENST00000521621 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
CLK4-209ENST00000521621 NUTM2BA6NNL0 878 aaPredicted RBP13.25□□□□□ -0.29
CLK4-209ENST00000521621 NUTM2EB1AL46 878 aaPredicted RBP13.25□□□□□ -0.29
CLK4-209ENST00000521621 NUTM2AQ8IVF1 878 aaPredicted RBP13.25□□□□□ -0.29
CLK4-209ENST00000521621 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
CLK4-209ENST00000521621 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
CLK4-209ENST00000521621 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
CLK4-209ENST00000521621 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
CLK4-209ENST00000521621 ANKRD26Q9UPS8 1709 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 GLI3P10071 1580 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 UNC5CLQ8IV45 518 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
CLK4-209ENST00000521621 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
CLK4-209ENST00000521621 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 VPS72Q15906 364 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 C8orf37Q96NL8 207 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 USP21Q9UK80 565 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 THSD7AQ9UPZ6 1657 aa13.22□□□□□ -0.29
CLK4-209ENST00000521621 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.29
CLK4-209ENST00000521621 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
CLK4-209ENST00000521621 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
CLK4-209ENST00000521621 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
CLK4-209ENST00000521621 SLC12A5Q9H2X9 1139 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 RXRBP28702 533 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 GCP02774 474 aa13.2□□□□□ -0.3
CLK4-209ENST00000521621 SOCS7O14512 581 aa13.19□□□□□ -0.3
CLK4-209ENST00000521621 QTRT2Q9H974 415 aaKnown RBP13.19□□□□□ -0.3
CLK4-209ENST00000521621 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
CLK4-209ENST00000521621 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
CLK4-209ENST00000521621 CAMTA1Q9Y6Y1 1673 aa13.19□□□□□ -0.3
CLK4-209ENST00000521621 LTN1O94822 1766 aa13.18□□□□□ -0.3
CLK4-209ENST00000521621 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
CLK4-209ENST00000521621 RGS12O14924 1447 aa13.18□□□□□ -0.3
CLK4-209ENST00000521621 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
CLK4-209ENST00000521621 COL5A2P05997 1499 aaPredicted RBP13.17□□□□□ -0.3
CLK4-209ENST00000521621 NSD2O96028 1365 aa13.17□□□□□ -0.3
CLK4-209ENST00000521621 NLRP6P59044 892 aa13.17□□□□□ -0.3
CLK4-209ENST00000521621 GJD4Q96KN9 370 aaPredicted RBP13.17□□□□□ -0.3
CLK4-209ENST00000521621 LMOD2Q6P5Q4 547 aa13.16□□□□□ -0.3
CLK4-209ENST00000521621 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
CLK4-209ENST00000521621 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
CLK4-209ENST00000521621 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
CLK4-209ENST00000521621 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
CLK4-209ENST00000521621 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
CLK4-209ENST00000521621 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
CLK4-209ENST00000521621 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
CLK4-209ENST00000521621 PRDM11Q9NQV5 511 aa13.15□□□□□ -0.31
CLK4-209ENST00000521621 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.31
CLK4-209ENST00000521621 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
CLK4-209ENST00000521621 CRB1P82279 1406 aa13.13□□□□□ -0.31
CLK4-209ENST00000521621 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
CLK4-209ENST00000521621 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
CLK4-209ENST00000521621 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
CLK4-209ENST00000521621 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
CLK4-209ENST00000521621 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
CLK4-209ENST00000521621 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
CLK4-209ENST00000521621 NME9Q86XW9 330 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms