RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 NBPF3Q9H094 633 aa6.34□□□□□ -1.39
NPM1-207ENST00000521260 CWC15Q9P013 229 aaKnown RBP6.34□□□□□ -1.39
NPM1-207ENST00000521260 SCRIBQ14160 1630 aa6.34□□□□□ -1.39
NPM1-207ENST00000521260 KIF16BQ96L93 1317 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 NUTM2FA1L443 756 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 ATMINO43313 823 aaPredicted RBP6.33□□□□□ -1.4
NPM1-207ENST00000521260 TDO2P48775 406 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 RRP1P56182 461 aaKnown RBP6.33□□□□□ -1.4
NPM1-207ENST00000521260 CBX1P83916 185 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 SETDB1Q15047 1291 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 TMC1Q8TDI8 760 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 DEF6Q9H4E7 631 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 C1orf115Q9H7X2 142 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 MED4Q9NPJ6 270 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.33□□□□□ -1.4
NPM1-207ENST00000521260 SLC52A1Q9NWF4 448 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 DONSONQ9NYP3 566 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 ZKSCAN5Q9Y2L8 839 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 CNTLNQ9NXG0 1405 aa6.33□□□□□ -1.4
NPM1-207ENST00000521260 WDR97A6NE52 1622 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 UBTFP17480 764 aaKnown RBP6.32□□□□□ -1.4
NPM1-207ENST00000521260 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 PTGDRQ13258 359 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 HDAC1Q13547 482 aaPredicted RBP6.32□□□□□ -1.4
NPM1-207ENST00000521260 ICE2Q659A1 982 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 FAM43BQ6ZT52 329 aaPredicted RBP6.32□□□□□ -1.4
NPM1-207ENST00000521260 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
NPM1-207ENST00000521260 MRS2Q9HD23 443 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 PRDM2Q13029 1718 aa6.32□□□□□ -1.4
NPM1-207ENST00000521260 RRBP1Q9P2E9 1410 aaKnown RBP6.32□□□□□ -1.4
NPM1-207ENST00000521260 ERBB4Q15303 1308 aa6.31□□□□□ -1.4
NPM1-207ENST00000521260 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
NPM1-207ENST00000521260 FLIIQ13045 1269 aa6.31□□□□□ -1.4
NPM1-207ENST00000521260 TEX35Q5T0J7 233 aa6.31□□□□□ -1.4
NPM1-207ENST00000521260 TMUB1Q9BVT8 246 aa6.31□□□□□ -1.4
NPM1-207ENST00000521260 PANK2Q9BZ23 570 aa6.31□□□□□ -1.4
NPM1-207ENST00000521260 MAPK8IP3Q9UPT6 1336 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 VIRMAQ69YN4 1812 aaKnown RBP6.3□□□□□ -1.4
NPM1-207ENST00000521260 NCOA2Q15596 1464 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 BAZ1BQ9UIG0 1483 aaKnown RBP6.3□□□□□ -1.4
NPM1-207ENST00000521260 PPP1R12AO14974 1030 aaPredicted RBP6.3□□□□□ -1.4
NPM1-207ENST00000521260 TPM3P06753 285 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 RABEP1Q15276 862 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.3□□□□□ -1.4
NPM1-207ENST00000521260 KIAA1107Q9UPP5 1409 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 ERICH3Q5RHP9 1530 aa6.3□□□□□ -1.4
NPM1-207ENST00000521260 CCDC196A0A1B0GTZ2 297 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 PLEKHD1A6NEE1 506 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 IGSF3O75054 1194 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 GPS2Q13227 327 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
NPM1-207ENST00000521260 AKNAQ7Z591 1439 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 FAM9BQ8IZU0 186 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 L3MBTL3Q96JM7 780 aaPredicted RBP6.29□□□□□ -1.4
NPM1-207ENST00000521260 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 TONSLQ96HA7 1378 aa6.29□□□□□ -1.4
NPM1-207ENST00000521260 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 TBC1D12O60347 775 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 EVI5O60447 810 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
NPM1-207ENST00000521260 USP8P40818 1118 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 SARNPP82979 210 aaKnown RBP6.28□□□□□ -1.4
NPM1-207ENST00000521260 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
NPM1-207ENST00000521260 HSP90AB4PQ58FF6 505 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 LRCH2Q5VUJ6 765 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 KRT222Q8N1A0 295 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 TXLNBQ8N3L3 684 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 PTCD2Q8WV60 388 aaKnown RBP6.28□□□□□ -1.4
NPM1-207ENST00000521260 DDX12PQ92771 950 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.4
NPM1-207ENST00000521260 ITFG2Q969R8 447 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 REPIN1Q9BWE0 567 aaKnown RBP6.28□□□□□ -1.4
NPM1-207ENST00000521260 CCDC88BA6NC98 1476 aa6.28□□□□□ -1.4
NPM1-207ENST00000521260 MAPKBP1O60336 1514 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 A6NJR5 290 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 CTAGE5O15320 804 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 EIF3JO75822 258 aaKnown RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 SETSIPP0DME0 302 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 RNF20Q5VTR2 975 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 CAVIN1Q6NZI2 390 aaKnown RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 GIGYF2Q6Y7W6 1299 aaKnown RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 NGEFQ8N5V2 710 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 ANTXR1Q9H6X2 564 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 SUDS3Q9H7L9 328 aaPredicted RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 PRKRIP1Q9H875 184 aaPredicted RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 NPDC1Q9NQX5 325 aaPredicted RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 FEZ2Q9UHY8 353 aaPredicted RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 RCAN3Q9UKA8 241 aa6.27□□□□□ -1.41
NPM1-207ENST00000521260 EIF3AQ14152 1382 aaKnown RBP6.27□□□□□ -1.41
NPM1-207ENST00000521260 SETD5Q9C0A6 1442 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 KIF21BO75037 1637 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 UNC13AQ9UPW8 1703 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 A0A1B0GUL7 405 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 H0YHG0 523 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
NPM1-207ENST00000521260 REC8O95072 547 aa6.26□□□□□ -1.41
NPM1-207ENST00000521260 SLC34A2O95436 690 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms