RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
PABPC1-212ENST00000519622 WDR62O43379 1518 aa6.88□□□□□ -1.31
PABPC1-212ENST00000519622 LRRC9Q6ZRR7 1453 aa6.88□□□□□ -1.31
PABPC1-212ENST00000519622 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
PABPC1-212ENST00000519622 TNFRSF10AO00220 468 aa6.88□□□□□ -1.31
PABPC1-212ENST00000519622 FYCO1Q9BQS8 1478 aa6.87□□□□□ -1.31
PABPC1-212ENST00000519622 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-212ENST00000519622 HLA-CQ95604 372 aa6.87□□□□□ -1.31
PABPC1-212ENST00000519622 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
PABPC1-212ENST00000519622 SALL2Q9Y467 1007 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-212ENST00000519622 THOC2Q8NI27 1593 aaKnown RBP6.86□□□□□ -1.31
PABPC1-212ENST00000519622 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 GAPVD1Q14C86 1478 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 MRC2Q9UBG0 1479 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 FHOD3Q2V2M9 1422 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PDS5BQ9NTI5 1447 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PRR20EP86478 221 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PRR20CP86479 221 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PRR20DP86480 221 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PRR20BP86481 221 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PRR20AP86496 221 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 PKD2L1Q9P0L9 805 aa6.86□□□□□ -1.31
PABPC1-212ENST00000519622 CASKIN1Q8WXD9 1431 aa6.85□□□□□ -1.31
PABPC1-212ENST00000519622 DHX57Q6P158 1386 aaKnown RBP6.85□□□□□ -1.31
PABPC1-212ENST00000519622 PHLDB1Q86UU1 1377 aa6.85□□□□□ -1.31
PABPC1-212ENST00000519622 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
PABPC1-212ENST00000519622 MAPKBP1O60336 1514 aa6.85□□□□□ -1.31
PABPC1-212ENST00000519622 MAGI3Q5TCQ9 1506 aa6.85□□□□□ -1.31
PABPC1-212ENST00000519622 KDM4AO75164 1064 aa6.84□□□□□ -1.31
PABPC1-212ENST00000519622 MYT1Q01538 1121 aa6.84□□□□□ -1.31
PABPC1-212ENST00000519622 FOXC1Q12948 553 aa6.84□□□□□ -1.31
PABPC1-212ENST00000519622 SPIRE2Q8WWL2 714 aa6.84□□□□□ -1.31
PABPC1-212ENST00000519622 TBC1D2Q9BYX2 928 aa6.84□□□□□ -1.31
PABPC1-212ENST00000519622 TDRD9Q8NDG6 1382 aaKnown RBP6.83□□□□□ -1.32
PABPC1-212ENST00000519622 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
PABPC1-212ENST00000519622 CCER1Q8TC90 406 aaPredicted RBP6.83□□□□□ -1.32
PABPC1-212ENST00000519622 CCNB3Q8WWL7 1395 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 POTECB2RU33 542 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 DGAT1O75907 488 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 RPIAP49247 311 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 GRIPAP1Q4V328 841 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 MSS51Q4VC12 460 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 PKDCCQ504Y2 493 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 MYSM1Q5VVJ2 828 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 FHAD1B1AJZ9 1412 aa6.82□□□□□ -1.32
PABPC1-212ENST00000519622 ZNF608Q9ULD9 1512 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-212ENST00000519622 FAM187AA6NFU0 413 aa6.81□□□□□ -1.32
PABPC1-212ENST00000519622 HOXA2O43364 376 aa6.81□□□□□ -1.32
PABPC1-212ENST00000519622 NDUFV2P19404 249 aa6.81□□□□□ -1.32
PABPC1-212ENST00000519622 RANGAP1P46060 587 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-212ENST00000519622 EIF4G3O43432 1585 aaKnown RBP6.81□□□□□ -1.32
PABPC1-212ENST00000519622 UGGT2Q9NYU1 1516 aa6.81□□□□□ -1.32
PABPC1-212ENST00000519622 MOXD2PA6NHM9 499 aa6.8□□□□□ -1.32
PABPC1-212ENST00000519622 CD2BP2O95400 341 aaKnown RBP6.8□□□□□ -1.32
PABPC1-212ENST00000519622 MMP16P51512 607 aa6.8□□□□□ -1.32
PABPC1-212ENST00000519622 IQGAP2Q13576 1575 aa6.8□□□□□ -1.32
PABPC1-212ENST00000519622 SYMPKQ92797 1274 aaKnown RBP6.8□□□□□ -1.32
PABPC1-212ENST00000519622 POLR3EQ9NVU0 708 aa6.8□□□□□ -1.32
PABPC1-212ENST00000519622 ST8SIA5O15466 376 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 Q3C1V9 767 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 SH3D19Q5HYK7 790 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
PABPC1-212ENST00000519622 LIMD1Q9UGP4 676 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 IFT140Q96RY7 1462 aa6.79□□□□□ -1.32
PABPC1-212ENST00000519622 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
PABPC1-212ENST00000519622 USP46P62068 366 aa6.78□□□□□ -1.32
PABPC1-212ENST00000519622 RSBN1LQ6PCB5 846 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-212ENST00000519622 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
PABPC1-212ENST00000519622 TOR4AQ9NXH8 423 aa6.78□□□□□ -1.32
PABPC1-212ENST00000519622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.78□□□□□ -1.32
PABPC1-212ENST00000519622 PTPRKQ15262 1439 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 EHBP1L1Q8N3D4 1523 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 DISP1Q96F81 1524 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 KIAA0556O60303 1618 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 DXOO77932 396 aaKnown RBP6.77□□□□□ -1.33
PABPC1-212ENST00000519622 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 PROCA1Q8NCQ7 364 aaPredicted RBP6.77□□□□□ -1.33
PABPC1-212ENST00000519622 AAASQ9NRG9 546 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 DACH1Q9UI36 760 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
PABPC1-212ENST00000519622 FMN1Q68DA7 1419 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 FDX1P10109 184 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 SKIV2LQ15477 1246 aaKnown RBP6.76□□□□□ -1.33
PABPC1-212ENST00000519622 ZNF775Q96BV0 537 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-212ENST00000519622 ATP1B4Q9UN42 357 aaPredicted RBP6.76□□□□□ -1.33
PABPC1-212ENST00000519622 TCOF1Q13428 1488 aaKnown RBP6.76□□□□□ -1.33
PABPC1-212ENST00000519622 CEP170Q5SW79 1584 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 FGD6Q6ZV73 1430 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 CLSPNQ9HAW4 1339 aa6.76□□□□□ -1.33
PABPC1-212ENST00000519622 RAB3GAP2Q9H2M9 1393 aa6.75□□□□□ -1.33
PABPC1-212ENST00000519622 SPTLC1O15269 473 aa6.75□□□□□ -1.33
PABPC1-212ENST00000519622 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-212ENST00000519622 TRIM32Q13049 653 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms