RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CLK4-203ENST00000519583 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
CLK4-203ENST00000519583 POLR3AO14802 1390 aaPredicted RBP10.82□□□□□ -0.68
CLK4-203ENST00000519583 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
CLK4-203ENST00000519583 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLK4-203ENST00000519583 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
CLK4-203ENST00000519583 SHPRHQ149N8 1683 aa10.81□□□□□ -0.68
CLK4-203ENST00000519583 TNS3Q68CZ2 1445 aa10.81□□□□□ -0.68
CLK4-203ENST00000519583 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
CLK4-203ENST00000519583 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
CLK4-203ENST00000519583 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
CLK4-203ENST00000519583 SLC12A5Q9H2X9 1139 aa10.81□□□□□ -0.68
CLK4-203ENST00000519583 MED1Q15648 1581 aaPredicted RBP10.8□□□□□ -0.68
CLK4-203ENST00000519583 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
CLK4-203ENST00000519583 PANK3Q9H999 370 aa10.8□□□□□ -0.68
CLK4-203ENST00000519583 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
CLK4-203ENST00000519583 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
CLK4-203ENST00000519583 ADAMTS2O95450 1211 aa10.79□□□□□ -0.68
CLK4-203ENST00000519583 ZNF692Q9BU19 519 aaPredicted RBP10.79□□□□□ -0.68
CLK4-203ENST00000519583 PHF23Q9BUL5 403 aaPredicted RBP10.79□□□□□ -0.68
CLK4-203ENST00000519583 LRP6O75581 1613 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
CLK4-203ENST00000519583 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 HDGFL2Q7Z4V5 671 aaPredicted RBP10.78□□□□□ -0.68
CLK4-203ENST00000519583 CABLES1Q8TDN4 633 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
CLK4-203ENST00000519583 USP6P35125 1406 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 RALBP1Q15311 655 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 KTN1Q86UP2 1357 aaKnown RBP10.78□□□□□ -0.68
CLK4-203ENST00000519583 TERF2IPQ9NYB0 399 aa10.78□□□□□ -0.68
CLK4-203ENST00000519583 ABTB2Q8N961 1025 aa10.77□□□□□ -0.68
CLK4-203ENST00000519583 MYBBP1AQ9BQG0 1328 aaKnown RBP10.76□□□□□ -0.69
CLK4-203ENST00000519583 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
CLK4-203ENST00000519583 CPSF1Q10570 1443 aaKnown RBP10.76□□□□□ -0.69
CLK4-203ENST00000519583 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
CLK4-203ENST00000519583 BRD4O60885 1362 aaPredicted RBP10.76□□□□□ -0.69
CLK4-203ENST00000519583 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
CLK4-203ENST00000519583 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
CLK4-203ENST00000519583 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
CLK4-203ENST00000519583 A0A1W2PP64 1363 aa10.75□□□□□ -0.69
CLK4-203ENST00000519583 TTC21BQ7Z4L5 1316 aa10.75□□□□□ -0.69
CLK4-203ENST00000519583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLK4-203ENST00000519583 C8orf37Q96NL8 207 aa10.75□□□□□ -0.69
CLK4-203ENST00000519583 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
CLK4-203ENST00000519583 AKAP12Q02952 1782 aa10.75□□□□□ -0.69
CLK4-203ENST00000519583 NLRP6P59044 892 aa10.74□□□□□ -0.69
CLK4-203ENST00000519583 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
CLK4-203ENST00000519583 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
CLK4-203ENST00000519583 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
CLK4-203ENST00000519583 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
CLK4-203ENST00000519583 TTC21AQ8NDW8 1320 aa10.73□□□□□ -0.69
CLK4-203ENST00000519583 PNISRQ8TF01 805 aaKnown RBP10.73□□□□□ -0.69
CLK4-203ENST00000519583 MON2Q7Z3U7 1717 aa10.73□□□□□ -0.69
CLK4-203ENST00000519583 EDC4Q6P2E9 1401 aaKnown RBP10.72□□□□□ -0.69
CLK4-203ENST00000519583 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
CLK4-203ENST00000519583 AFF2P51816 1311 aa10.72□□□□□ -0.69
CLK4-203ENST00000519583 NME9Q86XW9 330 aa10.72□□□□□ -0.69
CLK4-203ENST00000519583 MYOM1P52179 1685 aa10.71□□□□□ -0.69
CLK4-203ENST00000519583 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
CLK4-203ENST00000519583 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
CLK4-203ENST00000519583 NRKQ7Z2Y5 1582 aa10.71□□□□□ -0.7
CLK4-203ENST00000519583 ZC3H6P61129 1189 aaKnown RBP10.71□□□□□ -0.7
CLK4-203ENST00000519583 SOX12O15370 315 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 USP19O94966 1318 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 ZBED9Q6R2W3 1325 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
CLK4-203ENST00000519583 GCP02774 474 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
CLK4-203ENST00000519583 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
CLK4-203ENST00000519583 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
CLK4-203ENST00000519583 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
CLK4-203ENST00000519583 USP21Q9UK80 565 aa10.69□□□□□ -0.7
CLK4-203ENST00000519583 CARD14Q9BXL6 1004 aa10.69□□□□□ -0.7
CLK4-203ENST00000519583 FAM83GA6ND36 823 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
CLK4-203ENST00000519583 KIAA0232Q92628 1395 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 NSD3Q9BZ95 1437 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 CRYBG1Q9Y4K1 1723 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
CLK4-203ENST00000519583 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
CLK4-203ENST00000519583 MARF1Q9Y4F3 1742 aaKnown RBP10.68□□□□□ -0.7
CLK4-203ENST00000519583 SENP3-EIF4A1A0A087X0R7 540 aa10.67□□□□□ -0.7
CLK4-203ENST00000519583 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
CLK4-203ENST00000519583 GGNBP2Q9H3C7 697 aa10.67□□□□□ -0.7
CLK4-203ENST00000519583 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
CLK4-203ENST00000519583 COG3Q96JB2 828 aa10.67□□□□□ -0.7
CLK4-203ENST00000519583 FYB1O15117 783 aa10.66□□□□□ -0.7
CLK4-203ENST00000519583 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
CLK4-203ENST00000519583 BTG4Q9NY30 223 aa10.66□□□□□ -0.7
CLK4-203ENST00000519583 SLIT3O75094 1523 aa10.66□□□□□ -0.7
CLK4-203ENST00000519583 FKBP8Q14318 412 aa10.66□□□□□ -0.7
CLK4-203ENST00000519583 NPC1L1Q9UHC9 1359 aa10.65□□□□□ -0.7
CLK4-203ENST00000519583 PPP2R1AP30153 589 aa10.65□□□□□ -0.7
CLK4-203ENST00000519583 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.7
CLK4-203ENST00000519583 SLIT2O94813 1529 aa10.65□□□□□ -0.7
CLK4-203ENST00000519583 OVOS2A0A0J9YW53 1432 aa10.65□□□□□ -0.7
CLK4-203ENST00000519583 OVOS2Q6IE36 1432 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms