RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
TSNARE1-203ENST00000518928 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
TSNARE1-203ENST00000518928 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
TSNARE1-203ENST00000518928 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
TSNARE1-203ENST00000518928 NRAPQ86VF7 1730 aa20.4■□□□□ 0.86
TSNARE1-203ENST00000518928 CABP2Q9NPB3 220 aa20.4■□□□□ 0.86
TSNARE1-203ENST00000518928 ACEP12821 1306 aa20.39■□□□□ 0.85
TSNARE1-203ENST00000518928 CENPJQ9HC77 1338 aaPredicted RBP20.39■□□□□ 0.85
TSNARE1-203ENST00000518928 POLR3AO14802 1390 aaPredicted RBP20.38■□□□□ 0.85
TSNARE1-203ENST00000518928 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
TSNARE1-203ENST00000518928 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
TSNARE1-203ENST00000518928 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
TSNARE1-203ENST00000518928 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
TSNARE1-203ENST00000518928 VPS72Q15906 364 aa20.35■□□□□ 0.85
TSNARE1-203ENST00000518928 CCDC61Q9Y6R9 512 aa20.35■□□□□ 0.85
TSNARE1-203ENST00000518928 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
TSNARE1-203ENST00000518928 SRPK2P78362 688 aaKnown RBP20.34■□□□□ 0.85
TSNARE1-203ENST00000518928 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
TSNARE1-203ENST00000518928 PPIP5K1Q6PFW1 1433 aa20.34■□□□□ 0.85
TSNARE1-203ENST00000518928 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.84
TSNARE1-203ENST00000518928 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
TSNARE1-203ENST00000518928 SEPT12Q8IYM1 358 aa20.32■□□□□ 0.84
TSNARE1-203ENST00000518928 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
TSNARE1-203ENST00000518928 KIAA0232Q92628 1395 aa20.32■□□□□ 0.84
TSNARE1-203ENST00000518928 CCDC9Q9Y3X0 531 aaKnown RBP20.31■□□□□ 0.84
TSNARE1-203ENST00000518928 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
TSNARE1-203ENST00000518928 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
TSNARE1-203ENST00000518928 CABP1Q9NZU7 370 aa20.29■□□□□ 0.84
TSNARE1-203ENST00000518928 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
TSNARE1-203ENST00000518928 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
TSNARE1-203ENST00000518928 ONECUT3O60422 494 aaPredicted RBP20.26■□□□□ 0.83
TSNARE1-203ENST00000518928 ABTB2Q8N961 1025 aa20.25■□□□□ 0.83
TSNARE1-203ENST00000518928 USP6P35125 1406 aa20.25■□□□□ 0.83
TSNARE1-203ENST00000518928 USP19O94966 1318 aa20.25■□□□□ 0.83
TSNARE1-203ENST00000518928 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
TSNARE1-203ENST00000518928 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
TSNARE1-203ENST00000518928 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
TSNARE1-203ENST00000518928 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
TSNARE1-203ENST00000518928 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
TSNARE1-203ENST00000518928 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
TSNARE1-203ENST00000518928 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
TSNARE1-203ENST00000518928 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
TSNARE1-203ENST00000518928 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
TSNARE1-203ENST00000518928 A0A0G2JS52 829 aa20.21■□□□□ 0.83
TSNARE1-203ENST00000518928 MYT1Q01538 1121 aa20.21■□□□□ 0.83
TSNARE1-203ENST00000518928 DEFB132Q7Z7B7 95 aa20.21■□□□□ 0.83
TSNARE1-203ENST00000518928 EVC2Q86UK5 1308 aa20.21■□□□□ 0.83
TSNARE1-203ENST00000518928 KRT27Q7Z3Y8 459 aa20.2■□□□□ 0.82
TSNARE1-203ENST00000518928 TONSLQ96HA7 1378 aa20.2■□□□□ 0.82
TSNARE1-203ENST00000518928 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
TSNARE1-203ENST00000518928 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
TSNARE1-203ENST00000518928 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
TSNARE1-203ENST00000518928 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
TSNARE1-203ENST00000518928 AKAP12Q02952 1782 aa20.17■□□□□ 0.82
TSNARE1-203ENST00000518928 GCP02774 474 aa20.17■□□□□ 0.82
TSNARE1-203ENST00000518928 LARP1Q6PKG0 1096 aaKnown RBP20.17■□□□□ 0.82
TSNARE1-203ENST00000518928 SLIT3O75094 1523 aa20.17■□□□□ 0.82
TSNARE1-203ENST00000518928 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
TSNARE1-203ENST00000518928 CPDO75976 1380 aa20.16■□□□□ 0.82
TSNARE1-203ENST00000518928 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
TSNARE1-203ENST00000518928 ZRANB1Q9UGI0 708 aa20.15■□□□□ 0.82
TSNARE1-203ENST00000518928 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
TSNARE1-203ENST00000518928 CD163L1Q9NR16 1453 aa20.15■□□□□ 0.82
TSNARE1-203ENST00000518928 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
TSNARE1-203ENST00000518928 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
TSNARE1-203ENST00000518928 NLRP6P59044 892 aa20.14■□□□□ 0.81
TSNARE1-203ENST00000518928 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
TSNARE1-203ENST00000518928 COL5A2P05997 1499 aaPredicted RBP20.12■□□□□ 0.81
TSNARE1-203ENST00000518928 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
TSNARE1-203ENST00000518928 COL18A1P39060 1754 aa20.11■□□□□ 0.81
TSNARE1-203ENST00000518928 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
TSNARE1-203ENST00000518928 SOX12O15370 315 aa20.11■□□□□ 0.81
TSNARE1-203ENST00000518928 CCDC125Q86Z20 511 aa20.11■□□□□ 0.81
TSNARE1-203ENST00000518928 AXIN2Q9Y2T1 843 aa20.1■□□□□ 0.81
TSNARE1-203ENST00000518928 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
TSNARE1-203ENST00000518928 BRD4O60885 1362 aaPredicted RBP20.09■□□□□ 0.81
TSNARE1-203ENST00000518928 EVA1CP58658 441 aa20.08■□□□□ 0.81
TSNARE1-203ENST00000518928 TESK2Q96S53 571 aa20.08■□□□□ 0.81
TSNARE1-203ENST00000518928 SLC12A5Q9H2X9 1139 aa20.08■□□□□ 0.81
TSNARE1-203ENST00000518928 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
TSNARE1-203ENST00000518928 NFAT5O94916 1531 aa20.07■□□□□ 0.8
TSNARE1-203ENST00000518928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.07■□□□□ 0.8
TSNARE1-203ENST00000518928 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
TSNARE1-203ENST00000518928 NME9Q86XW9 330 aa20.06■□□□□ 0.8
TSNARE1-203ENST00000518928 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
TSNARE1-203ENST00000518928 ST20-MTHFSA0A0A6YYL1 179 aa20.05■□□□□ 0.8
TSNARE1-203ENST00000518928 AATKQ6ZMQ8 1374 aa20.05■□□□□ 0.8
TSNARE1-203ENST00000518928 EN1Q05925 392 aaPredicted RBP20.04■□□□□ 0.8
TSNARE1-203ENST00000518928 BARGINQ6ZT62 677 aa20.04■□□□□ 0.8
TSNARE1-203ENST00000518928 TCP11L2Q8N4U5 519 aa20.04■□□□□ 0.8
TSNARE1-203ENST00000518928 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
TSNARE1-203ENST00000518928 ARHGEF25Q86VW2 580 aa20.03■□□□□ 0.8
TSNARE1-203ENST00000518928 ZNF692Q9BU19 519 aaPredicted RBP20.03■□□□□ 0.8
TSNARE1-203ENST00000518928 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
TSNARE1-203ENST00000518928 RGPD1P0DJD0 1748 aa20.02■□□□□ 0.79
TSNARE1-203ENST00000518928 CRB1P82279 1406 aa20.02■□□□□ 0.79
TSNARE1-203ENST00000518928 TTC21AQ8NDW8 1320 aa20.02■□□□□ 0.79
TSNARE1-203ENST00000518928 TRIM37O94972 964 aa20.01■□□□□ 0.79
TSNARE1-203ENST00000518928 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
TSNARE1-203ENST00000518928 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms