RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, humanhuman

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-208ENST00000518668 NFKBIBQ15653 356 aa17.06■□□□□ 0.32
DENND3-208ENST00000518668 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
DENND3-208ENST00000518668 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
DENND3-208ENST00000518668 MBD3O95983 291 aa17.05■□□□□ 0.32
DENND3-208ENST00000518668 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
DENND3-208ENST00000518668 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
DENND3-208ENST00000518668 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
DENND3-208ENST00000518668 MRE11P49959 708 aa17.05■□□□□ 0.32
DENND3-208ENST00000518668 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 PDCP20941 246 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
DENND3-208ENST00000518668 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 CREBRFQ8IUR6 639 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 CEP89Q96ST8 783 aa17.04■□□□□ 0.32
DENND3-208ENST00000518668 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
DENND3-208ENST00000518668 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
DENND3-208ENST00000518668 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
DENND3-208ENST00000518668 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
DENND3-208ENST00000518668 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
DENND3-208ENST00000518668 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
DENND3-208ENST00000518668 BCAR3O75815 825 aa17.02■□□□□ 0.32
DENND3-208ENST00000518668 FOXD4L6Q3SYB3 417 aaPredicted RBP17.02■□□□□ 0.32
DENND3-208ENST00000518668 FOXD4L3Q6VB84 417 aaPredicted RBP17.02■□□□□ 0.32
DENND3-208ENST00000518668 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
DENND3-208ENST00000518668 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
DENND3-208ENST00000518668 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
DENND3-208ENST00000518668 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.31
DENND3-208ENST00000518668 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.31
DENND3-208ENST00000518668 CCDC70Q6NSX1 233 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 ADGRL1O94910 1474 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
DENND3-208ENST00000518668 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
DENND3-208ENST00000518668 CD109Q6YHK3 1445 aa17.01■□□□□ 0.31
DENND3-208ENST00000518668 IPO7O95373 1038 aaKnown RBP17.01■□□□□ 0.31
DENND3-208ENST00000518668 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.01■□□□□ 0.31
DENND3-208ENST00000518668 TBC1D2BQ9UPU7 963 aa17■□□□□ 0.31
DENND3-208ENST00000518668 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
DENND3-208ENST00000518668 NSD2O96028 1365 aa17■□□□□ 0.31
DENND3-208ENST00000518668 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
DENND3-208ENST00000518668 XBP1P17861 261 aa17■□□□□ 0.31
DENND3-208ENST00000518668 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
DENND3-208ENST00000518668 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
DENND3-208ENST00000518668 WASHC4Q2M389 1173 aa17■□□□□ 0.31
DENND3-208ENST00000518668 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
DENND3-208ENST00000518668 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
DENND3-208ENST00000518668 RAPGEF3O95398 923 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 KIF6Q6ZMV9 814 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 ANKLE2Q86XL3 938 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 GPS2Q13227 327 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 BRMS1Q9HCU9 246 aa16.99■□□□□ 0.31
DENND3-208ENST00000518668 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
DENND3-208ENST00000518668 DHX16O60231 1041 aaKnown RBP16.98■□□□□ 0.31
DENND3-208ENST00000518668 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
DENND3-208ENST00000518668 SART3Q15020 963 aaKnown RBP16.98■□□□□ 0.31
DENND3-208ENST00000518668 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
DENND3-208ENST00000518668 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
DENND3-208ENST00000518668 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
DENND3-208ENST00000518668 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
DENND3-208ENST00000518668 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
DENND3-208ENST00000518668 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
DENND3-208ENST00000518668 NEK4P51957 841 aa16.96■□□□□ 0.31
DENND3-208ENST00000518668 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
DENND3-208ENST00000518668 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
DENND3-208ENST00000518668 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
DENND3-208ENST00000518668 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
DENND3-208ENST00000518668 TRAK2O60296 914 aa16.96■□□□□ 0.3
DENND3-208ENST00000518668 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
DENND3-208ENST00000518668 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
DENND3-208ENST00000518668 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
DENND3-208ENST00000518668 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
DENND3-208ENST00000518668 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
DENND3-208ENST00000518668 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
DENND3-208ENST00000518668 CCDC158Q5M9N0 1113 aa16.93■□□□□ 0.3
DENND3-208ENST00000518668 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
DENND3-208ENST00000518668 DHX8Q14562 1220 aaKnown RBP16.93■□□□□ 0.3
DENND3-208ENST00000518668 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.3
DENND3-208ENST00000518668 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
DENND3-208ENST00000518668 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
DENND3-208ENST00000518668 K7ELQ4 463 aaPredicted RBP16.92■□□□□ 0.3
DENND3-208ENST00000518668 OLFM4Q6UX06 510 aa16.92■□□□□ 0.3
DENND3-208ENST00000518668 CTDP1Q9Y5B0 961 aaPredicted RBP16.92■□□□□ 0.3
DENND3-208ENST00000518668 MEX3CQ5U5Q3 659 aaKnown RBP16.92■□□□□ 0.3
DENND3-208ENST00000518668 C1orf115Q9H7X2 142 aa16.92■□□□□ 0.3
DENND3-208ENST00000518668 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
DENND3-208ENST00000518668 CABP4P57796 275 aa16.91■□□□□ 0.3
DENND3-208ENST00000518668 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
DENND3-208ENST00000518668 MSH5O43196 834 aa16.91■□□□□ 0.3
DENND3-208ENST00000518668 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
DENND3-208ENST00000518668 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
DENND3-208ENST00000518668 ITSN2Q9NZM3 1697 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms