RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
PABPC1-205ENST00000518196 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
PABPC1-205ENST00000518196 CABP1Q9NZU7 370 aa18■□□□□ 0.47
PABPC1-205ENST00000518196 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
PABPC1-205ENST00000518196 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
PABPC1-205ENST00000518196 KIF1AQ12756 1690 aa17.99■□□□□ 0.47
PABPC1-205ENST00000518196 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
PABPC1-205ENST00000518196 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
PABPC1-205ENST00000518196 NINLQ9Y2I6 1382 aa17.98■□□□□ 0.47
PABPC1-205ENST00000518196 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
PABPC1-205ENST00000518196 FOXO3O43524 673 aa17.96■□□□□ 0.47
PABPC1-205ENST00000518196 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
PABPC1-205ENST00000518196 NPHP3Q7Z494 1330 aa17.96■□□□□ 0.46
PABPC1-205ENST00000518196 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
PABPC1-205ENST00000518196 PSME1Q06323 249 aa17.95■□□□□ 0.46
PABPC1-205ENST00000518196 HDGFL2Q7Z4V5 671 aaPredicted RBP17.95■□□□□ 0.46
PABPC1-205ENST00000518196 FBXO41Q8TF61 875 aa17.95■□□□□ 0.46
PABPC1-205ENST00000518196 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
PABPC1-205ENST00000518196 ACEP12821 1306 aa17.95■□□□□ 0.46
PABPC1-205ENST00000518196 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
PABPC1-205ENST00000518196 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
PABPC1-205ENST00000518196 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
PABPC1-205ENST00000518196 KRT28Q7Z3Y7 464 aa17.92■□□□□ 0.46
PABPC1-205ENST00000518196 NHSL1Q5SYE7 1610 aa17.91■□□□□ 0.46
PABPC1-205ENST00000518196 DDX17Q92841 729 aaKnown RBP17.91■□□□□ 0.46
PABPC1-205ENST00000518196 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
PABPC1-205ENST00000518196 MYOM1P52179 1685 aa17.9■□□□□ 0.46
PABPC1-205ENST00000518196 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
PABPC1-205ENST00000518196 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
PABPC1-205ENST00000518196 ANKRD36BQ8N2N9 1353 aa17.9■□□□□ 0.46
PABPC1-205ENST00000518196 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
PABPC1-205ENST00000518196 PHLPP1O60346 1717 aa17.89■□□□□ 0.46
PABPC1-205ENST00000518196 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
PABPC1-205ENST00000518196 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
PABPC1-205ENST00000518196 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.45
PABPC1-205ENST00000518196 IFNLR1Q8IU57 520 aaPredicted RBP17.88■□□□□ 0.45
PABPC1-205ENST00000518196 A0A1W2PP64 1363 aa17.88■□□□□ 0.45
PABPC1-205ENST00000518196 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
PABPC1-205ENST00000518196 PANK3Q9H999 370 aa17.87■□□□□ 0.45
PABPC1-205ENST00000518196 USP6P35125 1406 aa17.87■□□□□ 0.45
PABPC1-205ENST00000518196 PAK3O75914 559 aaPredicted RBP17.86■□□□□ 0.45
PABPC1-205ENST00000518196 LRRC59Q96AG4 307 aaKnown RBP17.86■□□□□ 0.45
PABPC1-205ENST00000518196 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
PABPC1-205ENST00000518196 MON2Q7Z3U7 1717 aa17.85■□□□□ 0.45
PABPC1-205ENST00000518196 PXDNQ92626 1479 aa17.85■□□□□ 0.45
PABPC1-205ENST00000518196 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
PABPC1-205ENST00000518196 HSPA1LP34931 641 aa17.84■□□□□ 0.45
PABPC1-205ENST00000518196 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
PABPC1-205ENST00000518196 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
PABPC1-205ENST00000518196 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
PABPC1-205ENST00000518196 SPATA31A3Q5VYP0 1347 aa17.82■□□□□ 0.44
PABPC1-205ENST00000518196 TRPM3Q9HCF6 1732 aaPredicted RBP17.82■□□□□ 0.44
PABPC1-205ENST00000518196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
PABPC1-205ENST00000518196 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
PABPC1-205ENST00000518196 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
PABPC1-205ENST00000518196 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 DDX10Q13206 875 aaKnown RBP17.81■□□□□ 0.44
PABPC1-205ENST00000518196 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 SSH2Q76I76 1423 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
PABPC1-205ENST00000518196 ARHGEF10O15013 1369 aa17.79■□□□□ 0.44
PABPC1-205ENST00000518196 NRKQ7Z2Y5 1582 aa17.79■□□□□ 0.44
PABPC1-205ENST00000518196 CGNL1Q0VF96 1302 aa17.78■□□□□ 0.44
PABPC1-205ENST00000518196 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
PABPC1-205ENST00000518196 ALS2Q96Q42 1657 aa17.77■□□□□ 0.44
PABPC1-205ENST00000518196 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
PABPC1-205ENST00000518196 JCADQ9P266 1359 aa17.77■□□□□ 0.43
PABPC1-205ENST00000518196 NLRP6P59044 892 aa17.76■□□□□ 0.43
PABPC1-205ENST00000518196 NME9Q86XW9 330 aa17.76■□□□□ 0.43
PABPC1-205ENST00000518196 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-205ENST00000518196 NUTM2GQ5VZR2 741 aa17.75■□□□□ 0.43
PABPC1-205ENST00000518196 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
PABPC1-205ENST00000518196 KIF20BQ96Q89 1820 aa17.75■□□□□ 0.43
PABPC1-205ENST00000518196 FYB1O15117 783 aa17.74■□□□□ 0.43
PABPC1-205ENST00000518196 MIER1Q8N108 512 aa17.74■□□□□ 0.43
PABPC1-205ENST00000518196 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
PABPC1-205ENST00000518196 COG3Q96JB2 828 aa17.74■□□□□ 0.43
PABPC1-205ENST00000518196 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
PABPC1-205ENST00000518196 USP31Q70CQ4 1352 aa17.73■□□□□ 0.43
PABPC1-205ENST00000518196 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
PABPC1-205ENST00000518196 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
PABPC1-205ENST00000518196 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
PABPC1-205ENST00000518196 GGNBP2Q9H3C7 697 aa17.72■□□□□ 0.43
PABPC1-205ENST00000518196 NSD2O96028 1365 aa17.71■□□□□ 0.43
PABPC1-205ENST00000518196 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-205ENST00000518196 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
PABPC1-205ENST00000518196 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
PABPC1-205ENST00000518196 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
PABPC1-205ENST00000518196 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
PABPC1-205ENST00000518196 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
PABPC1-205ENST00000518196 USP54Q70EL1 1684 aa17.69■□□□□ 0.42
PABPC1-205ENST00000518196 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
PABPC1-205ENST00000518196 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
PABPC1-205ENST00000518196 CABLES1Q8TDN4 633 aa17.69■□□□□ 0.42
PABPC1-205ENST00000518196 MED1Q15648 1581 aaPredicted RBP17.69■□□□□ 0.42
PABPC1-205ENST00000518196 USP19O94966 1318 aa17.69■□□□□ 0.42
PABPC1-205ENST00000518196 NPC1L1Q9UHC9 1359 aa17.68■□□□□ 0.42
PABPC1-205ENST00000518196 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms