RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 SPATA31A5Q5VU36 1347 aa16.9■□□□□ 0.3
CTNNA1-205ENST00000517904 SPATA31A7Q8IWB4 1347 aa16.9■□□□□ 0.3
CTNNA1-205ENST00000517904 PRR36Q9H6K5 1346 aa16.9■□□□□ 0.3
CTNNA1-205ENST00000517904 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
CTNNA1-205ENST00000517904 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
CTNNA1-205ENST00000517904 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
CTNNA1-205ENST00000517904 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
CTNNA1-205ENST00000517904 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
CTNNA1-205ENST00000517904 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
CTNNA1-205ENST00000517904 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
CTNNA1-205ENST00000517904 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
CTNNA1-205ENST00000517904 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
CTNNA1-205ENST00000517904 WASLO00401 505 aaPredicted RBP16.83■□□□□ 0.28
CTNNA1-205ENST00000517904 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
CTNNA1-205ENST00000517904 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.28
CTNNA1-205ENST00000517904 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
CTNNA1-205ENST00000517904 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
CTNNA1-205ENST00000517904 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
CTNNA1-205ENST00000517904 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
CTNNA1-205ENST00000517904 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
CTNNA1-205ENST00000517904 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
CTNNA1-205ENST00000517904 TRIM37O94972 964 aa16.8■□□□□ 0.28
CTNNA1-205ENST00000517904 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
CTNNA1-205ENST00000517904 ATP7BP35670 1465 aa16.8■□□□□ 0.28
CTNNA1-205ENST00000517904 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
CTNNA1-205ENST00000517904 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
CTNNA1-205ENST00000517904 ARHGEF28Q8N1W1 1705 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-205ENST00000517904 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
CTNNA1-205ENST00000517904 RREB1Q92766 1687 aa16.77■□□□□ 0.28
CTNNA1-205ENST00000517904 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
CTNNA1-205ENST00000517904 APBA3O96018 575 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 USP35Q9P2H5 1018 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
CTNNA1-205ENST00000517904 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
CTNNA1-205ENST00000517904 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
CTNNA1-205ENST00000517904 NRKQ7Z2Y5 1582 aa16.73■□□□□ 0.27
CTNNA1-205ENST00000517904 TOPAZ1Q8N9V7 1692 aa16.73■□□□□ 0.27
CTNNA1-205ENST00000517904 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
CTNNA1-205ENST00000517904 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
CTNNA1-205ENST00000517904 POLR3AO14802 1390 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-205ENST00000517904 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
CTNNA1-205ENST00000517904 UTRNP46939 3433 aa16.71■□□□□ 0.27
CTNNA1-205ENST00000517904 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
CTNNA1-205ENST00000517904 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-205ENST00000517904 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
CTNNA1-205ENST00000517904 ACEP12821 1306 aa16.7■□□□□ 0.26
CTNNA1-205ENST00000517904 CPDO75976 1380 aa16.68■□□□□ 0.26
CTNNA1-205ENST00000517904 EVA1CP58658 441 aa16.68■□□□□ 0.26
CTNNA1-205ENST00000517904 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
CTNNA1-205ENST00000517904 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
CTNNA1-205ENST00000517904 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
CTNNA1-205ENST00000517904 USP19O94966 1318 aa16.67■□□□□ 0.26
CTNNA1-205ENST00000517904 PLEKHG3A1L390 1219 aa16.66■□□□□ 0.26
CTNNA1-205ENST00000517904 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
CTNNA1-205ENST00000517904 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
CTNNA1-205ENST00000517904 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
CTNNA1-205ENST00000517904 YY1P25490 414 aa16.65■□□□□ 0.26
CTNNA1-205ENST00000517904 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
CTNNA1-205ENST00000517904 COL5A2P05997 1499 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-205ENST00000517904 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
CTNNA1-205ENST00000517904 THRAP3Q9Y2W1 955 aaKnown RBP16.63■□□□□ 0.25
CTNNA1-205ENST00000517904 GCP02774 474 aa16.62■□□□□ 0.25
CTNNA1-205ENST00000517904 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
CTNNA1-205ENST00000517904 KCNQ2O43526 872 aa16.61■□□□□ 0.25
CTNNA1-205ENST00000517904 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
CTNNA1-205ENST00000517904 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
CTNNA1-205ENST00000517904 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
CTNNA1-205ENST00000517904 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 KIAA1210Q9ULL0 1709 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 CRB1P82279 1406 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
CTNNA1-205ENST00000517904 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
CTNNA1-205ENST00000517904 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
CTNNA1-205ENST00000517904 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
CTNNA1-205ENST00000517904 CASZ1Q86V15 1759 aa16.58■□□□□ 0.24
CTNNA1-205ENST00000517904 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
CTNNA1-205ENST00000517904 SLIT3O75094 1523 aa16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 AATKQ6ZMQ8 1374 aa16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 COL18A1P39060 1754 aa16.56■□□□□ 0.24
CTNNA1-205ENST00000517904 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
CTNNA1-205ENST00000517904 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
CTNNA1-205ENST00000517904 PLSCR1O15162 318 aa16.55■□□□□ 0.24
CTNNA1-205ENST00000517904 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
CTNNA1-205ENST00000517904 USP6P35125 1406 aa16.54■□□□□ 0.24
CTNNA1-205ENST00000517904 DDB1Q16531 1140 aa16.54■□□□□ 0.24
CTNNA1-205ENST00000517904 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
CTNNA1-205ENST00000517904 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms