RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.322e-7■■■■□ 23
TRAPPC9-203ENST00000517667 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
TRAPPC9-203ENST00000517667 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
TRAPPC9-203ENST00000517667 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
TRAPPC9-203ENST00000517667 TULP4Q9NRJ4 1543 aa17.04■□□□□ 0.32
TRAPPC9-203ENST00000517667 ITSN1Q15811 1721 aa17.04■□□□□ 0.32
TRAPPC9-203ENST00000517667 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-203ENST00000517667 ADGRB1O14514 1584 aa17.02■□□□□ 0.31
TRAPPC9-203ENST00000517667 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
TRAPPC9-203ENST00000517667 PHRF1Q9P1Y6 1649 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-203ENST00000517667 FAM182BQ5T319 152 aa16.99■□□□□ 0.31
TRAPPC9-203ENST00000517667 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
TRAPPC9-203ENST00000517667 RREB1Q92766 1687 aa16.99■□□□□ 0.31
TRAPPC9-203ENST00000517667 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
TRAPPC9-203ENST00000517667 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-203ENST00000517667 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-203ENST00000517667 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-203ENST00000517667 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
TRAPPC9-203ENST00000517667 PRR36Q9H6K5 1346 aa16.96■□□□□ 0.31
TRAPPC9-203ENST00000517667 CAMKK2Q96RR4 588 aa16.96■□□□□ 0.31
TRAPPC9-203ENST00000517667 ATP7BP35670 1465 aa16.96■□□□□ 0.31
TRAPPC9-203ENST00000517667 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.3
TRAPPC9-203ENST00000517667 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC9-203ENST00000517667 WASLO00401 505 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-203ENST00000517667 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC9-203ENST00000517667 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
TRAPPC9-203ENST00000517667 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
TRAPPC9-203ENST00000517667 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-203ENST00000517667 TRIM37O94972 964 aa16.93■□□□□ 0.3
TRAPPC9-203ENST00000517667 APBA3O96018 575 aa16.92■□□□□ 0.3
TRAPPC9-203ENST00000517667 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
TRAPPC9-203ENST00000517667 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
TRAPPC9-203ENST00000517667 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
TRAPPC9-203ENST00000517667 BARGINQ6ZT62 677 aa16.9■□□□□ 0.3
TRAPPC9-203ENST00000517667 STRN4Q9NRL3 753 aa16.9■□□□□ 0.3
TRAPPC9-203ENST00000517667 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.3
TRAPPC9-203ENST00000517667 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
TRAPPC9-203ENST00000517667 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
TRAPPC9-203ENST00000517667 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
TRAPPC9-203ENST00000517667 CHRNA2Q15822 529 aa16.88■□□□□ 0.29
TRAPPC9-203ENST00000517667 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
TRAPPC9-203ENST00000517667 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-203ENST00000517667 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-203ENST00000517667 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
TRAPPC9-203ENST00000517667 YY1P25490 414 aa16.87■□□□□ 0.29
TRAPPC9-203ENST00000517667 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
TRAPPC9-203ENST00000517667 C11orf95C9JLR9 678 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-203ENST00000517667 EVA1CP58658 441 aa16.86■□□□□ 0.29
TRAPPC9-203ENST00000517667 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-203ENST00000517667 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-203ENST00000517667 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-203ENST00000517667 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
TRAPPC9-203ENST00000517667 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 DCAF11Q8TEB1 546 aa16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 CPDO75976 1380 aa16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
TRAPPC9-203ENST00000517667 SPON1Q9HCB6 807 aa16.83■□□□□ 0.28
TRAPPC9-203ENST00000517667 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-203ENST00000517667 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
TRAPPC9-203ENST00000517667 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
TRAPPC9-203ENST00000517667 ACEP12821 1306 aa16.81■□□□□ 0.28
TRAPPC9-203ENST00000517667 LARP1Q6PKG0 1096 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-203ENST00000517667 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 USP19O94966 1318 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 PEAK1Q9H792 1746 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 KCNQ2O43526 872 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 COL5A2P05997 1499 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
TRAPPC9-203ENST00000517667 RAB3GAP2Q9H2M9 1393 aa16.79■□□□□ 0.28
TRAPPC9-203ENST00000517667 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
TRAPPC9-203ENST00000517667 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
TRAPPC9-203ENST00000517667 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
TRAPPC9-203ENST00000517667 CRB1P82279 1406 aa16.78■□□□□ 0.28
TRAPPC9-203ENST00000517667 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
TRAPPC9-203ENST00000517667 WNK3Q9BYP7 1800 aa16.77■□□□□ 0.27
TRAPPC9-203ENST00000517667 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
TRAPPC9-203ENST00000517667 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC9-203ENST00000517667 AKAP12Q02952 1782 aa16.75■□□□□ 0.27
TRAPPC9-203ENST00000517667 PLSCR1O15162 318 aa16.75■□□□□ 0.27
TRAPPC9-203ENST00000517667 GCP02774 474 aa16.74■□□□□ 0.27
TRAPPC9-203ENST00000517667 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
TRAPPC9-203ENST00000517667 SLIT3O75094 1523 aa16.71■□□□□ 0.27
TRAPPC9-203ENST00000517667 DDB1Q16531 1140 aa16.71■□□□□ 0.27
TRAPPC9-203ENST00000517667 AATKQ6ZMQ8 1374 aa16.71■□□□□ 0.27
TRAPPC9-203ENST00000517667 MYOM1P52179 1685 aa16.7■□□□□ 0.26
TRAPPC9-203ENST00000517667 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
TRAPPC9-203ENST00000517667 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-203ENST00000517667 BCL9O00512 1426 aa16.7■□□□□ 0.26
TRAPPC9-203ENST00000517667 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-203ENST00000517667 COL18A1P39060 1754 aa16.69■□□□□ 0.26
TRAPPC9-203ENST00000517667 UTRNP46939 3433 aa16.68■□□□□ 0.26
TRAPPC9-203ENST00000517667 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-203ENST00000517667 USP6P35125 1406 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms