RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 BAG6P46379 1132 aa22.34■■□□□ 1.17
CSGALNACT1-204ENST00000517494 TRPM3Q9HCF6 1732 aaPredicted RBP22.33■■□□□ 1.17
CSGALNACT1-204ENST00000517494 PSDA5PKW4 1024 aaPredicted RBP22.32■■□□□ 1.16
CSGALNACT1-204ENST00000517494 FAM182BQ5T319 152 aa22.32■■□□□ 1.16
CSGALNACT1-204ENST00000517494 PRDM11Q9NQV5 511 aa22.32■■□□□ 1.16
CSGALNACT1-204ENST00000517494 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
CSGALNACT1-204ENST00000517494 COL14A1Q05707 1796 aaKnown RBP22.3■■□□□ 1.16
CSGALNACT1-204ENST00000517494 ALS2Q96Q42 1657 aa22.29■■□□□ 1.16
CSGALNACT1-204ENST00000517494 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
CSGALNACT1-204ENST00000517494 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
CSGALNACT1-204ENST00000517494 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
CSGALNACT1-204ENST00000517494 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
CSGALNACT1-204ENST00000517494 NUTM2GQ5VZR2 741 aa22.26■■□□□ 1.15
CSGALNACT1-204ENST00000517494 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
CSGALNACT1-204ENST00000517494 STRN4Q9NRL3 753 aa22.26■■□□□ 1.15
CSGALNACT1-204ENST00000517494 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
CSGALNACT1-204ENST00000517494 ATP7BP35670 1465 aa22.23■■□□□ 1.15
CSGALNACT1-204ENST00000517494 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
CSGALNACT1-204ENST00000517494 STAC3Q96MF2 364 aa22.22■■□□□ 1.15
CSGALNACT1-204ENST00000517494 CDK19Q9BWU1 502 aa22.21■■□□□ 1.15
CSGALNACT1-204ENST00000517494 USP35Q9P2H5 1018 aa22.21■■□□□ 1.15
CSGALNACT1-204ENST00000517494 HRCP23327 699 aa22.2■■□□□ 1.14
CSGALNACT1-204ENST00000517494 ARHGEF28Q8N1W1 1705 aaKnown RBP22.2■■□□□ 1.14
CSGALNACT1-204ENST00000517494 R3HDM1Q15032 1099 aaKnown RBP22.19■■□□□ 1.14
CSGALNACT1-204ENST00000517494 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
CSGALNACT1-204ENST00000517494 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
CSGALNACT1-204ENST00000517494 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
CSGALNACT1-204ENST00000517494 LRP5O75197 1615 aa22.18■■□□□ 1.14
CSGALNACT1-204ENST00000517494 RGPD1P0DJD0 1748 aa22.17■■□□□ 1.14
CSGALNACT1-204ENST00000517494 THSD7AQ9UPZ6 1657 aa22.17■■□□□ 1.14
CSGALNACT1-204ENST00000517494 ACEP12821 1306 aa22.17■■□□□ 1.14
CSGALNACT1-204ENST00000517494 TRIM37O94972 964 aa22.17■■□□□ 1.14
CSGALNACT1-204ENST00000517494 EVA1CP58658 441 aa22.17■■□□□ 1.14
CSGALNACT1-204ENST00000517494 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
CSGALNACT1-204ENST00000517494 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
CSGALNACT1-204ENST00000517494 PHRF1Q9P1Y6 1649 aaKnown RBP22.14■■□□□ 1.14
CSGALNACT1-204ENST00000517494 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
CSGALNACT1-204ENST00000517494 ABTB2Q8N961 1025 aa22.14■■□□□ 1.13
CSGALNACT1-204ENST00000517494 CCDC61Q9Y6R9 512 aa22.14■■□□□ 1.13
CSGALNACT1-204ENST00000517494 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
CSGALNACT1-204ENST00000517494 PDE3BQ13370 1112 aa22.12■■□□□ 1.13
CSGALNACT1-204ENST00000517494 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
CSGALNACT1-204ENST00000517494 APBA3O96018 575 aa22.11■■□□□ 1.13
CSGALNACT1-204ENST00000517494 SRPK2P78362 688 aaKnown RBP22.11■■□□□ 1.13
CSGALNACT1-204ENST00000517494 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
CSGALNACT1-204ENST00000517494 ZBTB7CA1YPR0 619 aa22.1■■□□□ 1.13
CSGALNACT1-204ENST00000517494 LARP1Q6PKG0 1096 aaKnown RBP22.1■■□□□ 1.13
CSGALNACT1-204ENST00000517494 TNS1Q9HBL0 1735 aaKnown RBP22.1■■□□□ 1.13
CSGALNACT1-204ENST00000517494 PLEKHG3A1L390 1219 aa22.09■■□□□ 1.13
CSGALNACT1-204ENST00000517494 NBPF1Q3BBV0 1214 aa22.09■■□□□ 1.13
CSGALNACT1-204ENST00000517494 TOPAZ1Q8N9V7 1692 aa22.08■■□□□ 1.13
CSGALNACT1-204ENST00000517494 CAMKK2Q96RR4 588 aa22.08■■□□□ 1.13
CSGALNACT1-204ENST00000517494 NRKQ7Z2Y5 1582 aa22.08■■□□□ 1.12
CSGALNACT1-204ENST00000517494 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
CSGALNACT1-204ENST00000517494 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
CSGALNACT1-204ENST00000517494 CABP2Q9NPB3 220 aa22.07■■□□□ 1.12
CSGALNACT1-204ENST00000517494 PPIP5K1Q6PFW1 1433 aa22.06■■□□□ 1.12
CSGALNACT1-204ENST00000517494 CAMTA1Q9Y6Y1 1673 aa22.05■■□□□ 1.12
CSGALNACT1-204ENST00000517494 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
CSGALNACT1-204ENST00000517494 USP19O94966 1318 aa22.05■■□□□ 1.12
CSGALNACT1-204ENST00000517494 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
CSGALNACT1-204ENST00000517494 CPDO75976 1380 aa22.03■■□□□ 1.12
CSGALNACT1-204ENST00000517494 GCP02774 474 aa22.03■■□□□ 1.12
CSGALNACT1-204ENST00000517494 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
CSGALNACT1-204ENST00000517494 KIAA1210Q9ULL0 1709 aa22.01■■□□□ 1.11
CSGALNACT1-204ENST00000517494 NBPF14Q5TI25 921 aa21.99■■□□□ 1.11
CSGALNACT1-204ENST00000517494 THRAP3Q9Y2W1 955 aaKnown RBP21.99■■□□□ 1.11
CSGALNACT1-204ENST00000517494 LMO7Q8WWI1 1683 aa21.98■■□□□ 1.11
CSGALNACT1-204ENST00000517494 COL5A2P05997 1499 aaPredicted RBP21.98■■□□□ 1.11
CSGALNACT1-204ENST00000517494 NLRP6P59044 892 aa21.98■■□□□ 1.11
CSGALNACT1-204ENST00000517494 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
CSGALNACT1-204ENST00000517494 USP6P35125 1406 aa21.95■■□□□ 1.1
CSGALNACT1-204ENST00000517494 CRB1P82279 1406 aa21.95■■□□□ 1.1
CSGALNACT1-204ENST00000517494 TOM1L2Q6ZVM7 507 aa21.94■■□□□ 1.1
CSGALNACT1-204ENST00000517494 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
CSGALNACT1-204ENST00000517494 BRD4O60885 1362 aaPredicted RBP21.92■■□□□ 1.1
CSGALNACT1-204ENST00000517494 SOX12O15370 315 aa21.92■■□□□ 1.1
CSGALNACT1-204ENST00000517494 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
CSGALNACT1-204ENST00000517494 NUP188Q5SRE5 1749 aa21.92■■□□□ 1.1
CSGALNACT1-204ENST00000517494 RREB1Q92766 1687 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 OVOS2A0A0G2JMS6 1433 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 OVOS2A0A0J9YW53 1432 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 OVOS2Q6IE36 1432 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 AATKQ6ZMQ8 1374 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 DDB1Q16531 1140 aa21.91■■□□□ 1.1
CSGALNACT1-204ENST00000517494 EVC2Q86UK5 1308 aa21.9■■□□□ 1.1
CSGALNACT1-204ENST00000517494 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.09
CSGALNACT1-204ENST00000517494 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.09
CSGALNACT1-204ENST00000517494 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
CSGALNACT1-204ENST00000517494 SLIT3O75094 1523 aa21.88■■□□□ 1.09
CSGALNACT1-204ENST00000517494 CSB-PGBD3P0DP91 1061 aa21.87■■□□□ 1.09
CSGALNACT1-204ENST00000517494 SPON1Q9HCB6 807 aa21.87■■□□□ 1.09
CSGALNACT1-204ENST00000517494 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
CSGALNACT1-204ENST00000517494 LRRC37A3O60309 1634 aa21.85■■□□□ 1.09
CSGALNACT1-204ENST00000517494 PIK3C2AO00443 1686 aa21.85■■□□□ 1.09
CSGALNACT1-204ENST00000517494 WDR17Q8IZU2 1322 aa21.84■■□□□ 1.09
CSGALNACT1-204ENST00000517494 CPSF1Q10570 1443 aaKnown RBP21.84■■□□□ 1.09
CSGALNACT1-204ENST00000517494 KCNQ2O43526 872 aa21.84■■□□□ 1.09
CSGALNACT1-204ENST00000517494 ROCK2O75116 1388 aaKnown RBP21.84■■□□□ 1.09
CSGALNACT1-204ENST00000517494 TTC21BQ7Z4L5 1316 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms