RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 STAC3Q96MF2 364 aa8.73□□□□□ -1.01
RN7SKP238-201ENST00000516483 ITSN1Q15811 1721 aa8.73□□□□□ -1.01
RN7SKP238-201ENST00000516483 KIAA1210Q9ULL0 1709 aa8.73□□□□□ -1.01
RN7SKP238-201ENST00000516483 ACEP12821 1306 aa8.73□□□□□ -1.01
RN7SKP238-201ENST00000516483 ALS2Q96Q42 1657 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 SLIT2O94813 1529 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 ZC3H6P61129 1189 aaKnown RBP8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 NBPF8Q3BBV2 869 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 PRDM11Q9NQV5 511 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 GLI3P10071 1580 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 TRPM1Q7Z4N2 1603 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
RN7SKP238-201ENST00000516483 PPIP5K1Q6PFW1 1433 aa8.71□□□□□ -1.01
RN7SKP238-201ENST00000516483 SOX12O15370 315 aa8.71□□□□□ -1.02
RN7SKP238-201ENST00000516483 STRN4Q9NRL3 753 aa8.71□□□□□ -1.02
RN7SKP238-201ENST00000516483 TOPAZ1Q8N9V7 1692 aa8.71□□□□□ -1.02
RN7SKP238-201ENST00000516483 TONSLQ96HA7 1378 aa8.71□□□□□ -1.02
RN7SKP238-201ENST00000516483 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.02
RN7SKP238-201ENST00000516483 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 FAM98CQ17RN3 349 aaKnown RBP8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 FAM182BQ5T319 152 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 CCDC61Q9Y6R9 512 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 KIAA0232Q92628 1395 aa8.7□□□□□ -1.02
RN7SKP238-201ENST00000516483 BRWD3Q6RI45 1802 aa8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 VPS72Q15906 364 aa8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 CARD11Q9BXL7 1154 aa8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 POLR3AO14802 1390 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 PHRF1Q9P1Y6 1649 aaKnown RBP8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
RN7SKP238-201ENST00000516483 COL14A1Q05707 1796 aaKnown RBP8.67□□□□□ -1.02
RN7SKP238-201ENST00000516483 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
RN7SKP238-201ENST00000516483 PCGF6Q9BYE7 350 aa8.67□□□□□ -1.02
RN7SKP238-201ENST00000516483 NWD2Q9ULI1 1742 aa8.67□□□□□ -1.02
RN7SKP238-201ENST00000516483 NRKQ7Z2Y5 1582 aa8.66□□□□□ -1.02
RN7SKP238-201ENST00000516483 PLEKHG3A1L390 1219 aa8.66□□□□□ -1.02
RN7SKP238-201ENST00000516483 DEFB132Q7Z7B7 95 aa8.66□□□□□ -1.02
RN7SKP238-201ENST00000516483 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
RN7SKP238-201ENST00000516483 EVA1CP58658 441 aa8.65□□□□□ -1.02
RN7SKP238-201ENST00000516483 NLRP6P59044 892 aa8.65□□□□□ -1.02
RN7SKP238-201ENST00000516483 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
RN7SKP238-201ENST00000516483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.65□□□□□ -1.02
RN7SKP238-201ENST00000516483 USP6P35125 1406 aa8.64□□□□□ -1.03
RN7SKP238-201ENST00000516483 SPATA31A5Q5VU36 1347 aa8.64□□□□□ -1.03
RN7SKP238-201ENST00000516483 SPATA31A7Q8IWB4 1347 aa8.64□□□□□ -1.03
RN7SKP238-201ENST00000516483 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
RN7SKP238-201ENST00000516483 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
RN7SKP238-201ENST00000516483 GCP02774 474 aa8.63□□□□□ -1.03
RN7SKP238-201ENST00000516483 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
RN7SKP238-201ENST00000516483 NLRP13Q86W25 1043 aa8.63□□□□□ -1.03
RN7SKP238-201ENST00000516483 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 USP19O94966 1318 aa8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 SPATA31A1Q5TZJ5 1347 aa8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 SSH2Q76I76 1423 aa8.62□□□□□ -1.03
RN7SKP238-201ENST00000516483 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
RN7SKP238-201ENST00000516483 TTC21BQ7Z4L5 1316 aa8.61□□□□□ -1.03
RN7SKP238-201ENST00000516483 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
RN7SKP238-201ENST00000516483 ST20-MTHFSA0A0A6YYL1 179 aa8.6□□□□□ -1.03
RN7SKP238-201ENST00000516483 NME9Q86XW9 330 aa8.6□□□□□ -1.03
RN7SKP238-201ENST00000516483 AKAP12Q02952 1782 aa8.6□□□□□ -1.03
RN7SKP238-201ENST00000516483 THSD7AQ9UPZ6 1657 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 COL5A2P05997 1499 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 TRIM37O94972 964 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 EN1Q05925 392 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 TOM1L2Q6ZVM7 507 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 CPDO75976 1380 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
RN7SKP238-201ENST00000516483 TCP11L2Q8N4U5 519 aa8.58□□□□□ -1.04
RN7SKP238-201ENST00000516483 AXIN2Q9Y2T1 843 aa8.58□□□□□ -1.04
RN7SKP238-201ENST00000516483 SLIT3O75094 1523 aa8.58□□□□□ -1.04
RN7SKP238-201ENST00000516483 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
RN7SKP238-201ENST00000516483 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 CPSF1Q10570 1443 aaKnown RBP8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 BAG6P46379 1132 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 PDE3BQ13370 1112 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 HDGFL2Q7Z4V5 671 aaPredicted RBP8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 RGPD5Q99666 1765 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 USP47Q96K76 1375 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 MON2Q7Z3U7 1717 aa8.57□□□□□ -1.04
RN7SKP238-201ENST00000516483 FBLN1P23142 703 aa8.56□□□□□ -1.04
RN7SKP238-201ENST00000516483 TESK2Q96S53 571 aa8.56□□□□□ -1.04
RN7SKP238-201ENST00000516483 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
RN7SKP238-201ENST00000516483 SBNO2Q9Y2G9 1366 aa8.56□□□□□ -1.04
RN7SKP238-201ENST00000516483 TTC21AQ8NDW8 1320 aa8.55□□□□□ -1.04
RN7SKP238-201ENST00000516483 CRB1P82279 1406 aa8.55□□□□□ -1.04
RN7SKP238-201ENST00000516483 NFAT5O94916 1531 aa8.55□□□□□ -1.04
RN7SKP238-201ENST00000516483 EZH2Q15910 746 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms