RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GRIN2CQ14957 1233 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 FBLN7Q53RD9 439 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 TTC13Q8NBP0 860 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 ACDQ96AP0 544 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 SLC35F4A4IF30 521 aa2.09□□□□□ -2.07
RNU6-542P-201ENST00000516405 TAL1P17542 331 aaPredicted RBP2.09□□□□□ -2.07
RNU6-542P-201ENST00000516405 NBR1Q14596 966 aa2.09□□□□□ -2.07
RNU6-542P-201ENST00000516405 CERKQ8TCT0 537 aa2.09□□□□□ -2.07
RNU6-542P-201ENST00000516405 TPSG1Q9NRR2 321 aa2.08□□□□□ -2.08
RNU6-542P-201ENST00000516405 GATA4P43694 442 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 WDR4P57081 412 aaKnown RBP2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 NNTQ13423 1086 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 RIC3Q7Z5B4 369 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 RBM27Q9P2N5 1060 aaKnown RBP2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 MKL2Q9ULH7 1088 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 JAG2Q9Y219 1238 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 IGF1RP08069 1367 aa2.07□□□□□ -2.08
RNU6-542P-201ENST00000516405 BMP2P12643 396 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 HOXB4P17483 251 aaPredicted RBP2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 FECHP22830 423 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 PDE4AP27815 886 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 LINC00114Q6XXX2 140 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 EHBP1Q8NDI1 1231 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 CDHR5Q9HBB8 845 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 LRRC4BQ9NT99 713 aa2.06□□□□□ -2.08
RNU6-542P-201ENST00000516405 SHISA8B8ZZ34 492 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 OIP5O43482 229 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 ADH1CP00326 375 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 SPOCD1Q6ZMY3 1216 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 DDX27Q96GQ7 796 aaKnown RBP2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 ZFAND3Q9H8U3 227 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 TAOK2Q9UL54 1235 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 TLL2Q9Y6L7 1015 aa2.05□□□□□ -2.08
RNU6-542P-201ENST00000516405 FIGNL2A6NMB9 653 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 FMNL1O95466 1100 aaPredicted RBP2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 MSS51Q4VC12 460 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 MORN1Q5T089 497 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 BRICD5Q6PL45 260 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 PADI6Q6TGC4 694 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 LINC00528Q8N1L1 170 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 LARP6Q9BRS8 491 aaKnown RBP2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 TMEM134Q9H6X4 195 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 MBIPQ9NS73 344 aa2.04□□□□□ -2.08
RNU6-542P-201ENST00000516405 NCANO14594 1321 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 PSPNO60542 156 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 C8AP07357 584 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 ELNP15502 786 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 MMP16P51512 607 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 IRAK1P51617 712 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 C1orf229Q6ZS94 237 aaPredicted RBP2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 ITPKCQ96DU7 683 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 SLC27A5Q9Y2P5 690 aa2.03□□□□□ -2.08
RNU6-542P-201ENST00000516405 TTLL8A6PVC2 850 aa2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 PRRG2O14669 202 aa2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 ZIC2O95409 532 aaPredicted RBP2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 ZNF865P0CJ78 1059 aaPredicted RBP2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 FKBP8Q14318 412 aa2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 MFSD10Q14728 455 aa2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 RNF19BQ6ZMZ0 732 aa2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 CUEDC1Q9NWM3 386 aaPredicted RBP2.02□□□□□ -2.09
RNU6-542P-201ENST00000516405 SENP3-EIF4A1A0A087X0R7 540 aa2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 DPYSL4O14531 572 aa2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 DNAJB2P25686 324 aa2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 BUD31P41223 144 aaPredicted RBP2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 RRAGCQ9HB90 399 aa2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 NPDC1Q9NQX5 325 aaPredicted RBP2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 SALL2Q9Y467 1007 aaPredicted RBP2.01□□□□□ -2.09
RNU6-542P-201ENST00000516405 OGFOD2Q6N063 350 aa2□□□□□ -2.09
RNU6-542P-201ENST00000516405 CCDC24Q8N4L8 307 aa2□□□□□ -2.09
RNU6-542P-201ENST00000516405 MEIOBQ8N635 442 aa2□□□□□ -2.09
RNU6-542P-201ENST00000516405 GPR25O00155 361 aa1.99□□□□□ -2.09
RNU6-542P-201ENST00000516405 UPP2O95045 317 aa1.99□□□□□ -2.09
RNU6-542P-201ENST00000516405 SH3BP2P78314 561 aa1.99□□□□□ -2.09
RNU6-542P-201ENST00000516405 OAS3Q9Y6K5 1087 aaKnown RBP1.99□□□□□ -2.09
RNU6-542P-201ENST00000516405 GNB5O14775 395 aa1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 DXOO77932 396 aaKnown RBP1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 FUT2Q10981 343 aa1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 PTCRAQ6ISU1 281 aaPredicted RBP1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 MPNDQ8N594 471 aa1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 TRIM52Q96A61 297 aa1.98□□□□□ -2.09
RNU6-542P-201ENST00000516405 B8ZZF3 427 aa1.97□□□□□ -2.09
RNU6-542P-201ENST00000516405 NR3C2P08235 984 aa1.97□□□□□ -2.09
RNU6-542P-201ENST00000516405 GIGYF2Q6Y7W6 1299 aaKnown RBP1.97□□□□□ -2.09
RNU6-542P-201ENST00000516405 PLEKHG3A1L390 1219 aa1.96□□□□□ -2.1
RNU6-542P-201ENST00000516405 RCCD1A6NED2 376 aa1.96□□□□□ -2.1
RNU6-542P-201ENST00000516405 ATP6V1AP38606 617 aa1.96□□□□□ -2.1
RNU6-542P-201ENST00000516405 LSRQ86X29 649 aaPredicted RBP1.96□□□□□ -2.1
RNU6-542P-201ENST00000516405 RNF112Q9ULX5 631 aa1.96□□□□□ -2.1
RNU6-542P-201ENST00000516405 H2AFB1P0C5Y9 115 aa1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 H2AFB2P0C5Z0 115 aa1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 CAMK2BQ13554 666 aa1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 EDARADDQ8WWZ3 215 aa1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 ZNF837Q96EG3 531 aaPredicted RBP1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 TSEN34Q9BSV6 310 aaKnown RBP1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 OXCT2Q9BYC2 517 aaPredicted RBP1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 AVENQ9NQS1 362 aaPredicted RBP1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 PCMTD2Q9NV79 361 aa1.95□□□□□ -2.1
RNU6-542P-201ENST00000516405 DGKGP49619 791 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms