RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LRSAM1Q6UWE0 723 aa15.8■□□□□ 0.12
SMAD1-215ENST00000515385 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
SMAD1-215ENST00000515385 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
SMAD1-215ENST00000515385 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
SMAD1-215ENST00000515385 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
SMAD1-215ENST00000515385 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
SMAD1-215ENST00000515385 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
SMAD1-215ENST00000515385 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
SMAD1-215ENST00000515385 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
SMAD1-215ENST00000515385 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
SMAD1-215ENST00000515385 MCTP1Q6DN14 999 aa15.79■□□□□ 0.12
SMAD1-215ENST00000515385 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
SMAD1-215ENST00000515385 PRIM1P49642 420 aaKnown RBP15.79■□□□□ 0.12
SMAD1-215ENST00000515385 RABEP1Q15276 862 aa15.78■□□□□ 0.12
SMAD1-215ENST00000515385 CHD1LQ86WJ1 897 aa15.78■□□□□ 0.12
SMAD1-215ENST00000515385 PLB1Q6P1J6 1458 aa15.77■□□□□ 0.12
SMAD1-215ENST00000515385 IFT140Q96RY7 1462 aa15.77■□□□□ 0.12
SMAD1-215ENST00000515385 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMAD1-215ENST00000515385 PPP4R3BQ5MIZ7 849 aa15.77■□□□□ 0.12
SMAD1-215ENST00000515385 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.11
SMAD1-215ENST00000515385 CD2BP2O95400 341 aaKnown RBP15.77■□□□□ 0.11
SMAD1-215ENST00000515385 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.11
SMAD1-215ENST00000515385 SHPRHQ149N8 1683 aa15.77■□□□□ 0.11
SMAD1-215ENST00000515385 ADGRL1O94910 1474 aa15.76■□□□□ 0.11
SMAD1-215ENST00000515385 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
SMAD1-215ENST00000515385 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 ITPRIPQ8IWB1 547 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 CEP152O94986 1710 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 MBD3O95983 291 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 TRIM27P14373 513 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
SMAD1-215ENST00000515385 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
SMAD1-215ENST00000515385 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
SMAD1-215ENST00000515385 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
SMAD1-215ENST00000515385 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
SMAD1-215ENST00000515385 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
SMAD1-215ENST00000515385 RRP7AQ9Y3A4 280 aaKnown RBP15.74■□□□□ 0.11
SMAD1-215ENST00000515385 PTMAP06454 111 aaKnown RBP15.73■□□□□ 0.11
SMAD1-215ENST00000515385 CFAP53Q96M91 514 aa15.73■□□□□ 0.11
SMAD1-215ENST00000515385 YEATS2Q9ULM3 1422 aa15.73■□□□□ 0.11
SMAD1-215ENST00000515385 KIAA1210Q9ULL0 1709 aa15.73■□□□□ 0.11
SMAD1-215ENST00000515385 DNTTIP2Q5QJE6 756 aaKnown RBP15.72■□□□□ 0.11
SMAD1-215ENST00000515385 TBC1D9Q6ZT07 1266 aa15.72■□□□□ 0.11
SMAD1-215ENST00000515385 ARID3AQ99856 593 aa15.72■□□□□ 0.11
SMAD1-215ENST00000515385 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
SMAD1-215ENST00000515385 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
SMAD1-215ENST00000515385 PIBF1Q8WXW3 757 aa15.72■□□□□ 0.11
SMAD1-215ENST00000515385 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
SMAD1-215ENST00000515385 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.11
SMAD1-215ENST00000515385 ABCA8O94911 1581 aa15.71■□□□□ 0.11
SMAD1-215ENST00000515385 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
SMAD1-215ENST00000515385 CDC45O75419 566 aa15.71■□□□□ 0.11
SMAD1-215ENST00000515385 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
SMAD1-215ENST00000515385 PRPF40AO75400 957 aaKnown RBP15.71■□□□□ 0.1
SMAD1-215ENST00000515385 UVSSAQ2YD98 709 aa15.71■□□□□ 0.1
SMAD1-215ENST00000515385 MORC1Q86VD1 984 aa15.71■□□□□ 0.1
SMAD1-215ENST00000515385 ZNF710Q8N1W2 664 aa15.71■□□□□ 0.1
SMAD1-215ENST00000515385 GPT2Q8TD30 523 aa15.71■□□□□ 0.1
SMAD1-215ENST00000515385 TMEM51Q9NW97 253 aa15.71■□□□□ 0.1
SMAD1-215ENST00000515385 ERVK-7P63135 1459 aa15.7■□□□□ 0.1
SMAD1-215ENST00000515385 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
SMAD1-215ENST00000515385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMAD1-215ENST00000515385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMAD1-215ENST00000515385 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
SMAD1-215ENST00000515385 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
SMAD1-215ENST00000515385 CBX1P83916 185 aa15.69■□□□□ 0.1
SMAD1-215ENST00000515385 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
SMAD1-215ENST00000515385 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
SMAD1-215ENST00000515385 FAM184AQ8NB25 1140 aa15.69■□□□□ 0.1
SMAD1-215ENST00000515385 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
SMAD1-215ENST00000515385 TSPY26PQ9H489 355 aa15.69■□□□□ 0.1
SMAD1-215ENST00000515385 IL16Q14005 1332 aa15.69■□□□□ 0.1
SMAD1-215ENST00000515385 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
SMAD1-215ENST00000515385 NOS1P29475 1434 aa15.68■□□□□ 0.1
SMAD1-215ENST00000515385 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
SMAD1-215ENST00000515385 PHF14O94880 888 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 CHRM1P11229 460 aaPredicted RBP15.67■□□□□ 0.1
SMAD1-215ENST00000515385 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMAD1-215ENST00000515385 SSH1Q8WYL5 1049 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 TMEM63CQ9P1W3 806 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 SBNO2Q9Y2G9 1366 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 CLTCL1P53675 1640 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 SYCE3A1L190 88 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 ATP10BO94823 1461 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 FEZ1Q99689 392 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 SPTLC3Q9NUV7 552 aa15.67■□□□□ 0.1
SMAD1-215ENST00000515385 NOB1Q9ULX3 412 aaKnown RBP15.67■□□□□ 0.1
SMAD1-215ENST00000515385 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
SMAD1-215ENST00000515385 PREX2Q70Z35 1606 aa15.66■□□□□ 0.1
SMAD1-215ENST00000515385 ST18O60284 1047 aa15.66■□□□□ 0.1
SMAD1-215ENST00000515385 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
SMAD1-215ENST00000515385 DIAPH3Q9NSV4 1193 aa15.66■□□□□ 0.1
SMAD1-215ENST00000515385 EXOSC9Q06265 439 aaKnown RBP15.65■□□□□ 0.1
SMAD1-215ENST00000515385 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
SMAD1-215ENST00000515385 PDCL2Q8N4E4 241 aa15.65■□□□□ 0.1
SMAD1-215ENST00000515385 FKBP5Q13451 457 aaPredicted RBP15.64■□□□□ 0.09
SMAD1-215ENST00000515385 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
SMAD1-215ENST00000515385 TRPM2O94759 1503 aa15.64■□□□□ 0.09
SMAD1-215ENST00000515385 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms