RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 PRR36Q9H6K5 1346 aa19.52■□□□□ 0.72
SMAD5-209ENST00000514777 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
SMAD5-209ENST00000514777 POGKQ9P215 609 aa19.51■□□□□ 0.71
SMAD5-209ENST00000514777 EZH2Q15910 746 aaKnown RBP19.5■□□□□ 0.71
SMAD5-209ENST00000514777 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
SMAD5-209ENST00000514777 DISP2A7MBM2 1401 aa19.5■□□□□ 0.71
SMAD5-209ENST00000514777 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
SMAD5-209ENST00000514777 ADGRB1O14514 1584 aa19.49■□□□□ 0.71
SMAD5-209ENST00000514777 GPRASP1Q5JY77 1395 aa19.47■□□□□ 0.71
SMAD5-209ENST00000514777 CAMKK2Q96RR4 588 aa19.47■□□□□ 0.71
SMAD5-209ENST00000514777 TRAK1Q9UPV9 953 aa19.47■□□□□ 0.71
SMAD5-209ENST00000514777 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
SMAD5-209ENST00000514777 TULP4Q9NRJ4 1543 aa19.45■□□□□ 0.7
SMAD5-209ENST00000514777 WASLO00401 505 aaPredicted RBP19.44■□□□□ 0.7
SMAD5-209ENST00000514777 SPATA31A1Q5TZJ5 1347 aa19.44■□□□□ 0.7
SMAD5-209ENST00000514777 TRIM37O94972 964 aa19.43■□□□□ 0.7
SMAD5-209ENST00000514777 PRDM11Q9NQV5 511 aa19.43■□□□□ 0.7
SMAD5-209ENST00000514777 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
SMAD5-209ENST00000514777 CHRNA2Q15822 529 aa19.42■□□□□ 0.7
SMAD5-209ENST00000514777 NGDNQ8NEJ9 315 aaKnown RBP19.41■□□□□ 0.7
SMAD5-209ENST00000514777 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
SMAD5-209ENST00000514777 FAM196AQ6ZSG2 479 aa19.4■□□□□ 0.7
SMAD5-209ENST00000514777 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
SMAD5-209ENST00000514777 APBA3O96018 575 aa19.39■□□□□ 0.69
SMAD5-209ENST00000514777 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
SMAD5-209ENST00000514777 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
SMAD5-209ENST00000514777 RREB1Q92766 1687 aa19.39■□□□□ 0.69
SMAD5-209ENST00000514777 NUP188Q5SRE5 1749 aa19.37■□□□□ 0.69
SMAD5-209ENST00000514777 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
SMAD5-209ENST00000514777 KDM2AQ9Y2K7 1162 aa19.36■□□□□ 0.69
SMAD5-209ENST00000514777 ITSN1Q15811 1721 aa19.36■□□□□ 0.69
SMAD5-209ENST00000514777 NUDT16Q96DE0 195 aaKnown RBP19.35■□□□□ 0.69
SMAD5-209ENST00000514777 ATP7BP35670 1465 aa19.35■□□□□ 0.69
SMAD5-209ENST00000514777 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
SMAD5-209ENST00000514777 PARD3Q8TEW0 1356 aa19.34■□□□□ 0.69
SMAD5-209ENST00000514777 NUTM2GQ5VZR2 741 aa19.34■□□□□ 0.69
SMAD5-209ENST00000514777 BARGINQ6ZT62 677 aa19.34■□□□□ 0.69
SMAD5-209ENST00000514777 USP35Q9P2H5 1018 aa19.34■□□□□ 0.69
SMAD5-209ENST00000514777 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.69
SMAD5-209ENST00000514777 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
SMAD5-209ENST00000514777 SSH2Q76I76 1423 aa19.32■□□□□ 0.68
SMAD5-209ENST00000514777 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
SMAD5-209ENST00000514777 EVA1CP58658 441 aa19.3■□□□□ 0.68
SMAD5-209ENST00000514777 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
SMAD5-209ENST00000514777 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
SMAD5-209ENST00000514777 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
SMAD5-209ENST00000514777 CDK19Q9BWU1 502 aa19.29■□□□□ 0.68
SMAD5-209ENST00000514777 TOPAZ1Q8N9V7 1692 aa19.29■□□□□ 0.68
SMAD5-209ENST00000514777 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
SMAD5-209ENST00000514777 ACEP12821 1306 aa19.28■□□□□ 0.68
SMAD5-209ENST00000514777 NRKQ7Z2Y5 1582 aa19.28■□□□□ 0.68
SMAD5-209ENST00000514777 YY1P25490 414 aa19.28■□□□□ 0.68
SMAD5-209ENST00000514777 NBPF14Q5TI25 921 aa19.27■□□□□ 0.68
SMAD5-209ENST00000514777 TCP11L2Q8N4U5 519 aa19.27■□□□□ 0.68
SMAD5-209ENST00000514777 RAB3GAP2Q9H2M9 1393 aa19.27■□□□□ 0.68
SMAD5-209ENST00000514777 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
SMAD5-209ENST00000514777 PARP4Q9UKK3 1724 aaKnown RBP19.25■□□□□ 0.67
SMAD5-209ENST00000514777 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
SMAD5-209ENST00000514777 CPDO75976 1380 aa19.25■□□□□ 0.67
SMAD5-209ENST00000514777 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
SMAD5-209ENST00000514777 KCNQ2O43526 872 aa19.24■□□□□ 0.67
SMAD5-209ENST00000514777 ABTB2Q8N961 1025 aa19.24■□□□□ 0.67
SMAD5-209ENST00000514777 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
SMAD5-209ENST00000514777 USP19O94966 1318 aa19.24■□□□□ 0.67
SMAD5-209ENST00000514777 PEAK1Q9H792 1746 aa19.23■□□□□ 0.67
SMAD5-209ENST00000514777 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
SMAD5-209ENST00000514777 THRAP3Q9Y2W1 955 aaKnown RBP19.23■□□□□ 0.67
SMAD5-209ENST00000514777 GCP02774 474 aa19.21■□□□□ 0.67
SMAD5-209ENST00000514777 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
SMAD5-209ENST00000514777 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
SMAD5-209ENST00000514777 PPP1R1BQ9UD71 204 aaPredicted RBP19.19■□□□□ 0.66
SMAD5-209ENST00000514777 PLSCR1O15162 318 aa19.18■□□□□ 0.66
SMAD5-209ENST00000514777 NLRP13Q86W25 1043 aa19.18■□□□□ 0.66
SMAD5-209ENST00000514777 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
SMAD5-209ENST00000514777 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
SMAD5-209ENST00000514777 CASZ1Q86V15 1759 aa19.18■□□□□ 0.66
SMAD5-209ENST00000514777 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
SMAD5-209ENST00000514777 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
SMAD5-209ENST00000514777 PROM2Q8N271 834 aa19.16■□□□□ 0.66
SMAD5-209ENST00000514777 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
SMAD5-209ENST00000514777 COL18A1P39060 1754 aa19.16■□□□□ 0.66
SMAD5-209ENST00000514777 CRB1P82279 1406 aa19.16■□□□□ 0.66
SMAD5-209ENST00000514777 LRRC37A3O60309 1634 aa19.15■□□□□ 0.66
SMAD5-209ENST00000514777 KIAA1210Q9ULL0 1709 aa19.15■□□□□ 0.66
SMAD5-209ENST00000514777 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.65
SMAD5-209ENST00000514777 NBPF1Q3BBV0 1214 aa19.14■□□□□ 0.65
SMAD5-209ENST00000514777 OVOS2A0A0G2JMS6 1433 aa19.14■□□□□ 0.65
SMAD5-209ENST00000514777 OVOS2A0A0J9YW53 1432 aa19.14■□□□□ 0.65
SMAD5-209ENST00000514777 OVOS2Q6IE36 1432 aa19.14■□□□□ 0.65
SMAD5-209ENST00000514777 PPIP5K1Q6PFW1 1433 aa19.13■□□□□ 0.65
SMAD5-209ENST00000514777 BCL11BQ9C0K0 894 aaPredicted RBP19.12■□□□□ 0.65
SMAD5-209ENST00000514777 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
SMAD5-209ENST00000514777 WNK3Q9BYP7 1800 aa19.11■□□□□ 0.65
SMAD5-209ENST00000514777 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
SMAD5-209ENST00000514777 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
SMAD5-209ENST00000514777 DDB1Q16531 1140 aa19.11■□□□□ 0.65
SMAD5-209ENST00000514777 AXIN2Q9Y2T1 843 aa19.11■□□□□ 0.65
SMAD5-209ENST00000514777 SLIT3O75094 1523 aa19.1■□□□□ 0.65
SMAD5-209ENST00000514777 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
SMAD5-209ENST00000514777 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms