RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GJD4Q96KN9 370 aaPredicted RBP15.05■□□□□ -0
HMGXB3-205ENST00000514469 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
HMGXB3-205ENST00000514469 ROCK2O75116 1388 aaKnown RBP15.04■□□□□ -0
HMGXB3-205ENST00000514469 ATAD2Q6PL18 1390 aa15.04■□□□□ -0
HMGXB3-205ENST00000514469 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
HMGXB3-205ENST00000514469 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
HMGXB3-205ENST00000514469 PPIP5K1Q6PFW1 1433 aa15.03■□□□□ -0
HMGXB3-205ENST00000514469 PLEKHG5O94827 1062 aa15.03■□□□□ -0
HMGXB3-205ENST00000514469 EP400Q96L91 3159 aa15.03■□□□□ -0
HMGXB3-205ENST00000514469 ACEP12821 1306 aa15.02■□□□□ -0
HMGXB3-205ENST00000514469 VPS72Q15906 364 aa15.02■□□□□ -0
HMGXB3-205ENST00000514469 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
HMGXB3-205ENST00000514469 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
HMGXB3-205ENST00000514469 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
HMGXB3-205ENST00000514469 TRIM26Q12899 539 aaPredicted RBP15.01□□□□□ -0.01
HMGXB3-205ENST00000514469 NRKQ7Z2Y5 1582 aa15.01□□□□□ -0.01
HMGXB3-205ENST00000514469 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
HMGXB3-205ENST00000514469 CABP2Q9NPB3 220 aa15□□□□□ -0.01
HMGXB3-205ENST00000514469 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
HMGXB3-205ENST00000514469 BRD4O60885 1362 aaPredicted RBP14.98□□□□□ -0.01
HMGXB3-205ENST00000514469 EVC2Q86UK5 1308 aa14.97□□□□□ -0.01
HMGXB3-205ENST00000514469 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
HMGXB3-205ENST00000514469 USP6P35125 1406 aa14.97□□□□□ -0.01
HMGXB3-205ENST00000514469 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
HMGXB3-205ENST00000514469 USP19O94966 1318 aa14.96□□□□□ -0.01
HMGXB3-205ENST00000514469 KIAA0232Q92628 1395 aa14.96□□□□□ -0.02
HMGXB3-205ENST00000514469 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
HMGXB3-205ENST00000514469 ONECUT3O60422 494 aaPredicted RBP14.95□□□□□ -0.02
HMGXB3-205ENST00000514469 PRDM11Q9NQV5 511 aa14.95□□□□□ -0.02
HMGXB3-205ENST00000514469 LMO7Q8WWI1 1683 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 THSD7AQ9UPZ6 1657 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 SSH2Q76I76 1423 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 NUTM2GQ5VZR2 741 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 SEPT12Q8IYM1 358 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
HMGXB3-205ENST00000514469 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 SLIT3O75094 1523 aa14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 CCDC9Q9Y3X0 531 aaKnown RBP14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 CPDO75976 1380 aa14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 AKAP12Q02952 1782 aa14.93□□□□□ -0.02
HMGXB3-205ENST00000514469 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
HMGXB3-205ENST00000514469 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
HMGXB3-205ENST00000514469 CARD11Q9BXL7 1154 aa14.91□□□□□ -0.02
HMGXB3-205ENST00000514469 BLMP54132 1417 aaPredicted RBP14.91□□□□□ -0.02
HMGXB3-205ENST00000514469 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
HMGXB3-205ENST00000514469 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
HMGXB3-205ENST00000514469 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
HMGXB3-205ENST00000514469 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
HMGXB3-205ENST00000514469 FAM98CQ17RN3 349 aaKnown RBP14.89□□□□□ -0.03
HMGXB3-205ENST00000514469 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
HMGXB3-205ENST00000514469 CAMTA1Q9Y6Y1 1673 aa14.89□□□□□ -0.03
HMGXB3-205ENST00000514469 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
HMGXB3-205ENST00000514469 KRT27Q7Z3Y8 459 aa14.88□□□□□ -0.03
HMGXB3-205ENST00000514469 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
HMGXB3-205ENST00000514469 GCP02774 474 aa14.87□□□□□ -0.03
HMGXB3-205ENST00000514469 COL5A2P05997 1499 aaPredicted RBP14.87□□□□□ -0.03
HMGXB3-205ENST00000514469 CD163L1Q9NR16 1453 aa14.87□□□□□ -0.03
HMGXB3-205ENST00000514469 USP54Q70EL1 1684 aa14.86□□□□□ -0.03
HMGXB3-205ENST00000514469 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
HMGXB3-205ENST00000514469 A0A0G2JS52 829 aa14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 NLRP6P59044 892 aa14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 MYT1Q01538 1121 aa14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 STRN4Q9NRL3 753 aa14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 KTN1Q86UP2 1357 aaKnown RBP14.85□□□□□ -0.03
HMGXB3-205ENST00000514469 NFAT5O94916 1531 aa14.84□□□□□ -0.03
HMGXB3-205ENST00000514469 AATKQ6ZMQ8 1374 aa14.84□□□□□ -0.03
HMGXB3-205ENST00000514469 COL18A1P39060 1754 aa14.83□□□□□ -0.03
HMGXB3-205ENST00000514469 LARP1Q6PKG0 1096 aaKnown RBP14.82□□□□□ -0.04
HMGXB3-205ENST00000514469 BARGINQ6ZT62 677 aa14.82□□□□□ -0.04
HMGXB3-205ENST00000514469 RGPD1P0DJD0 1748 aa14.82□□□□□ -0.04
HMGXB3-205ENST00000514469 ABCC6O95255 1503 aa14.82□□□□□ -0.04
HMGXB3-205ENST00000514469 PUS7Q96PZ0 661 aaKnown RBP14.81□□□□□ -0.04
HMGXB3-205ENST00000514469 TESK2Q96S53 571 aa14.81□□□□□ -0.04
HMGXB3-205ENST00000514469 CRB1P82279 1406 aa14.81□□□□□ -0.04
HMGXB3-205ENST00000514469 TNS1Q9HBL0 1735 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-205ENST00000514469 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-205ENST00000514469 EVA1CP58658 441 aa14.8□□□□□ -0.04
HMGXB3-205ENST00000514469 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
HMGXB3-205ENST00000514469 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
HMGXB3-205ENST00000514469 A0A1W2PP64 1363 aa14.79□□□□□ -0.04
HMGXB3-205ENST00000514469 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
HMGXB3-205ENST00000514469 KCNH5Q8NCM2 988 aa14.79□□□□□ -0.04
HMGXB3-205ENST00000514469 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
HMGXB3-205ENST00000514469 WNK3Q9BYP7 1800 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 DISP2A7MBM2 1401 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 CLSPNQ9HAW4 1339 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 ST20-MTHFSA0A0A6YYL1 179 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 TCP11L2Q8N4U5 519 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 USP35Q9P2H5 1018 aa14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 THRAP3Q9Y2W1 955 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-205ENST00000514469 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
HMGXB3-205ENST00000514469 USP47Q96K76 1375 aa14.77□□□□□ -0.04
HMGXB3-205ENST00000514469 ZBTB7CA1YPR0 619 aa14.77□□□□□ -0.05
HMGXB3-205ENST00000514469 FAM182BQ5T319 152 aa14.77□□□□□ -0.05
HMGXB3-205ENST00000514469 HDGFL2Q7Z4V5 671 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms