RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ACIN1Q9UKV3 1341 aaKnown RBP30.17■■■□□ 2.42
SQSTM1-215ENST00000514093 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
SQSTM1-215ENST00000514093 DLC1Q96QB1 1528 aa30.15■■■□□ 2.42
SQSTM1-215ENST00000514093 ALS2Q96Q42 1657 aa30.14■■■□□ 2.42
SQSTM1-215ENST00000514093 RGPD1P0DJD0 1748 aa30.14■■■□□ 2.42
SQSTM1-215ENST00000514093 EZH2Q15910 746 aaKnown RBP30.14■■■□□ 2.42
SQSTM1-215ENST00000514093 PRDM11Q9NQV5 511 aa30.12■■■□□ 2.41
SQSTM1-215ENST00000514093 ADGRB2O60241 1585 aa30.11■■■□□ 2.41
SQSTM1-215ENST00000514093 NGDNQ8NEJ9 315 aaKnown RBP30.11■■■□□ 2.41
SQSTM1-215ENST00000514093 WASLO00401 505 aaPredicted RBP30.08■■■□□ 2.41
SQSTM1-215ENST00000514093 TRIM37O94972 964 aa30.08■■■□□ 2.41
SQSTM1-215ENST00000514093 THSD7AQ9UPZ6 1657 aa30.07■■■□□ 2.41
SQSTM1-215ENST00000514093 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
SQSTM1-215ENST00000514093 CHRNA2Q15822 529 aa30.07■■■□□ 2.4
SQSTM1-215ENST00000514093 TNS1Q9HBL0 1735 aaKnown RBP30.07■■■□□ 2.4
SQSTM1-215ENST00000514093 DISP2A7MBM2 1401 aa30.06■■■□□ 2.4
SQSTM1-215ENST00000514093 STRN4Q9NRL3 753 aa30.06■■■□□ 2.4
SQSTM1-215ENST00000514093 TULP4Q9NRJ4 1543 aa30.06■■■□□ 2.4
SQSTM1-215ENST00000514093 SPATA31A1Q5TZJ5 1347 aa30.05■■■□□ 2.4
SQSTM1-215ENST00000514093 CAMKK2Q96RR4 588 aa30.05■■■□□ 2.4
SQSTM1-215ENST00000514093 KDM2AQ9Y2K7 1162 aa30.05■■■□□ 2.4
SQSTM1-215ENST00000514093 CRYBG1Q9Y4K1 1723 aa30.04■■■□□ 2.4
SQSTM1-215ENST00000514093 EIF3AQ14152 1382 aaKnown RBP30.03■■■□□ 2.4
SQSTM1-215ENST00000514093 KIAA0232Q92628 1395 aa30.03■■■□□ 2.4
SQSTM1-215ENST00000514093 APBA3O96018 575 aa30.02■■■□□ 2.4
SQSTM1-215ENST00000514093 FAM196AQ6ZSG2 479 aa30.02■■■□□ 2.4
SQSTM1-215ENST00000514093 USP35Q9P2H5 1018 aa30.02■■■□□ 2.4
SQSTM1-215ENST00000514093 NUTM2GQ5VZR2 741 aa30.01■■■□□ 2.39
SQSTM1-215ENST00000514093 ZC3H6P61129 1189 aaKnown RBP30■■■□□ 2.39
SQSTM1-215ENST00000514093 DCAF11Q8TEB1 546 aa29.97■■■□□ 2.39
SQSTM1-215ENST00000514093 NUDT16Q96DE0 195 aaKnown RBP29.96■■■□□ 2.39
SQSTM1-215ENST00000514093 EVA1CP58658 441 aa29.94■■■□□ 2.38
SQSTM1-215ENST00000514093 PDE3BQ13370 1112 aa29.93■■■□□ 2.38
SQSTM1-215ENST00000514093 PHRF1Q9P1Y6 1649 aaKnown RBP29.9■■■□□ 2.38
SQSTM1-215ENST00000514093 ATP7BP35670 1465 aa29.9■■■□□ 2.38
SQSTM1-215ENST00000514093 LARP1Q6PKG0 1096 aaKnown RBP29.88■■■□□ 2.37
SQSTM1-215ENST00000514093 PARD3Q8TEW0 1356 aa29.88■■■□□ 2.37
SQSTM1-215ENST00000514093 BARGINQ6ZT62 677 aa29.87■■■□□ 2.37
SQSTM1-215ENST00000514093 CDK19Q9BWU1 502 aa29.87■■■□□ 2.37
SQSTM1-215ENST00000514093 SSH2Q76I76 1423 aa29.87■■■□□ 2.37
SQSTM1-215ENST00000514093 NBPF8Q3BBV2 869 aa29.85■■■□□ 2.37
SQSTM1-215ENST00000514093 NBPF14Q5TI25 921 aa29.85■■■□□ 2.37
SQSTM1-215ENST00000514093 ACEP12821 1306 aa29.85■■■□□ 2.37
SQSTM1-215ENST00000514093 RAB3GAP2Q9H2M9 1393 aa29.85■■■□□ 2.37
SQSTM1-215ENST00000514093 ITSN1Q15811 1721 aa29.85■■■□□ 2.37
SQSTM1-215ENST00000514093 YY1P25490 414 aa29.84■■■□□ 2.37
SQSTM1-215ENST00000514093 TCP11L2Q8N4U5 519 aa29.83■■■□□ 2.37
SQSTM1-215ENST00000514093 ARHGEF28Q8N1W1 1705 aaKnown RBP29.82■■■□□ 2.36
SQSTM1-215ENST00000514093 RREB1Q92766 1687 aa29.82■■■□□ 2.36
SQSTM1-215ENST00000514093 CAMTA1Q9Y6Y1 1673 aa29.82■■■□□ 2.36
SQSTM1-215ENST00000514093 NUP188Q5SRE5 1749 aa29.82■■■□□ 2.36
SQSTM1-215ENST00000514093 ABTB2Q8N961 1025 aa29.81■■■□□ 2.36
SQSTM1-215ENST00000514093 POLR3AO14802 1390 aaPredicted RBP29.79■■■□□ 2.36
SQSTM1-215ENST00000514093 PPP1R1BQ9UD71 204 aaPredicted RBP29.78■■■□□ 2.36
SQSTM1-215ENST00000514093 CCDC61Q9Y6R9 512 aa29.78■■■□□ 2.36
SQSTM1-215ENST00000514093 NRKQ7Z2Y5 1582 aa29.77■■■□□ 2.36
SQSTM1-215ENST00000514093 PLEKHG3A1L390 1219 aa29.75■■■□□ 2.35
SQSTM1-215ENST00000514093 STAC3Q96MF2 364 aa29.75■■■□□ 2.35
SQSTM1-215ENST00000514093 SPON1Q9HCB6 807 aa29.75■■■□□ 2.35
SQSTM1-215ENST00000514093 CPDO75976 1380 aa29.74■■■□□ 2.35
SQSTM1-215ENST00000514093 LMO7Q8WWI1 1683 aa29.73■■■□□ 2.35
SQSTM1-215ENST00000514093 KCNQ2O43526 872 aa29.73■■■□□ 2.35
SQSTM1-215ENST00000514093 THRAP3Q9Y2W1 955 aaKnown RBP29.73■■■□□ 2.35
SQSTM1-215ENST00000514093 TOPAZ1Q8N9V7 1692 aa29.72■■■□□ 2.35
SQSTM1-215ENST00000514093 ZBTB7CA1YPR0 619 aa29.72■■■□□ 2.35
SQSTM1-215ENST00000514093 GCP02774 474 aa29.72■■■□□ 2.35
SQSTM1-215ENST00000514093 USP19O94966 1318 aa29.71■■■□□ 2.35
SQSTM1-215ENST00000514093 NLRP13Q86W25 1043 aa29.69■■■□□ 2.34
SQSTM1-215ENST00000514093 COL5A2P05997 1499 aaPredicted RBP29.68■■■□□ 2.34
SQSTM1-215ENST00000514093 PARP4Q9UKK3 1724 aaKnown RBP29.65■■■□□ 2.34
SQSTM1-215ENST00000514093 DCAF8L1A6NGE4 600 aa29.65■■■□□ 2.34
SQSTM1-215ENST00000514093 SRPK2P78362 688 aaKnown RBP29.65■■■□□ 2.34
SQSTM1-215ENST00000514093 PTF1AQ7RTS3 328 aa29.65■■■□□ 2.34
SQSTM1-215ENST00000514093 CRB1P82279 1406 aa29.63■■■□□ 2.33
SQSTM1-215ENST00000514093 NBPF1Q3BBV0 1214 aa29.63■■■□□ 2.33
SQSTM1-215ENST00000514093 ANO8Q9HCE9 1232 aaPredicted RBP29.63■■■□□ 2.33
SQSTM1-215ENST00000514093 CABP2Q9NPB3 220 aa29.63■■■□□ 2.33
SQSTM1-215ENST00000514093 OVOS2A0A0G2JMS6 1433 aa29.62■■■□□ 2.33
SQSTM1-215ENST00000514093 OVOS2A0A0J9YW53 1432 aa29.62■■■□□ 2.33
SQSTM1-215ENST00000514093 OVOS2Q6IE36 1432 aa29.62■■■□□ 2.33
SQSTM1-215ENST00000514093 PPIP5K1Q6PFW1 1433 aa29.62■■■□□ 2.33
SQSTM1-215ENST00000514093 NINLQ9Y2I6 1382 aa29.62■■■□□ 2.33
SQSTM1-215ENST00000514093 PDGFDQ9GZP0 370 aaPredicted RBP29.61■■■□□ 2.33
SQSTM1-215ENST00000514093 C11orf95C9JLR9 678 aaPredicted RBP29.6■■■□□ 2.33
SQSTM1-215ENST00000514093 DDB1Q16531 1140 aa29.6■■■□□ 2.33
SQSTM1-215ENST00000514093 PEAK1Q9H792 1746 aa29.59■■■□□ 2.33
SQSTM1-215ENST00000514093 PLSCR1O15162 318 aa29.59■■■□□ 2.33
SQSTM1-215ENST00000514093 NLRP6P59044 892 aa29.59■■■□□ 2.33
SQSTM1-215ENST00000514093 TOM1L2Q6ZVM7 507 aa29.58■■■□□ 2.33
SQSTM1-215ENST00000514093 BCL11BQ9C0K0 894 aaPredicted RBP29.56■■■□□ 2.32
SQSTM1-215ENST00000514093 ZBTB7AO95365 584 aa29.55■■■□□ 2.32
SQSTM1-215ENST00000514093 PROM2Q8N271 834 aa29.55■■■□□ 2.32
SQSTM1-215ENST00000514093 CABP1Q9NZU7 370 aa29.55■■■□□ 2.32
SQSTM1-215ENST00000514093 LRRC37A3O60309 1634 aa29.55■■■□□ 2.32
SQSTM1-215ENST00000514093 SBF2Q86WG5 1849 aa29.55■■■□□ 2.32
SQSTM1-215ENST00000514093 AATKQ6ZMQ8 1374 aa29.54■■■□□ 2.32
SQSTM1-215ENST00000514093 MARCH10Q8NA82 808 aaPredicted RBP29.53■■■□□ 2.32
SQSTM1-215ENST00000514093 AXIN2Q9Y2T1 843 aa29.53■■■□□ 2.32
SQSTM1-215ENST00000514093 CENPJQ9HC77 1338 aaPredicted RBP29.52■■■□□ 2.32
SQSTM1-215ENST00000514093 RGPD3A6NKT7 1758 aaPredicted RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms