RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 GSE1Q14687 1217 aa16.14■□□□□ 0.17
SDHA-216ENST00000514027 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
SDHA-216ENST00000514027 IGHDP01880 384 aa16.14■□□□□ 0.17
SDHA-216ENST00000514027 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
SDHA-216ENST00000514027 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
SDHA-216ENST00000514027 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
SDHA-216ENST00000514027 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
SDHA-216ENST00000514027 PHF23Q9BUL5 403 aaPredicted RBP16.13■□□□□ 0.17
SDHA-216ENST00000514027 C8orf34Q49A92 452 aa16.13■□□□□ 0.17
SDHA-216ENST00000514027 ALKQ9UM73 1620 aa16.12■□□□□ 0.17
SDHA-216ENST00000514027 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
SDHA-216ENST00000514027 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
SDHA-216ENST00000514027 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
SDHA-216ENST00000514027 MLECQ14165 292 aa16.11■□□□□ 0.17
SDHA-216ENST00000514027 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
SDHA-216ENST00000514027 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
SDHA-216ENST00000514027 FYB1O15117 783 aa16.1■□□□□ 0.17
SDHA-216ENST00000514027 CDK19Q9BWU1 502 aa16.1■□□□□ 0.17
SDHA-216ENST00000514027 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
SDHA-216ENST00000514027 CLTCQ00610 1675 aaKnown RBP16.1■□□□□ 0.17
SDHA-216ENST00000514027 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
SDHA-216ENST00000514027 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
SDHA-216ENST00000514027 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
SDHA-216ENST00000514027 RLBP1P12271 317 aa16.09■□□□□ 0.17
SDHA-216ENST00000514027 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
SDHA-216ENST00000514027 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
SDHA-216ENST00000514027 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
SDHA-216ENST00000514027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.16
SDHA-216ENST00000514027 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
SDHA-216ENST00000514027 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
SDHA-216ENST00000514027 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
SDHA-216ENST00000514027 ARHGEF40Q8TER5 1519 aa16.05■□□□□ 0.16
SDHA-216ENST00000514027 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
SDHA-216ENST00000514027 NLRP1Q9C000 1473 aa16.05■□□□□ 0.16
SDHA-216ENST00000514027 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
SDHA-216ENST00000514027 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
SDHA-216ENST00000514027 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 MED14O60244 1454 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
SDHA-216ENST00000514027 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SDHA-216ENST00000514027 TPRNQ4KMQ1 711 aa16.02■□□□□ 0.16
SDHA-216ENST00000514027 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
SDHA-216ENST00000514027 FBLN1P23142 703 aa16.02■□□□□ 0.15
SDHA-216ENST00000514027 RIPK4P57078 832 aa16.02■□□□□ 0.15
SDHA-216ENST00000514027 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.15
SDHA-216ENST00000514027 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
SDHA-216ENST00000514027 AGLP35573 1532 aa16.01■□□□□ 0.15
SDHA-216ENST00000514027 REREQ9P2R6 1566 aa16■□□□□ 0.15
SDHA-216ENST00000514027 SPATA31D1Q6ZQQ2 1576 aa16■□□□□ 0.15
SDHA-216ENST00000514027 MVPQ14764 893 aaKnown RBP16■□□□□ 0.15
SDHA-216ENST00000514027 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
SDHA-216ENST00000514027 AAMPQ13685 434 aa15.99■□□□□ 0.15
SDHA-216ENST00000514027 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
SDHA-216ENST00000514027 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
SDHA-216ENST00000514027 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
SDHA-216ENST00000514027 DLC1Q96QB1 1528 aa15.98■□□□□ 0.15
SDHA-216ENST00000514027 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
SDHA-216ENST00000514027 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
SDHA-216ENST00000514027 RWDD1Q9H446 243 aaPredicted RBP15.98■□□□□ 0.15
SDHA-216ENST00000514027 LRRC7Q96NW7 1537 aa15.97■□□□□ 0.15
SDHA-216ENST00000514027 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
SDHA-216ENST00000514027 SSH1Q8WYL5 1049 aa15.97■□□□□ 0.15
SDHA-216ENST00000514027 ATP7BP35670 1465 aa15.97■□□□□ 0.15
SDHA-216ENST00000514027 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
SDHA-216ENST00000514027 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
SDHA-216ENST00000514027 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
SDHA-216ENST00000514027 PNPLA6Q8IY17 1366 aa15.96■□□□□ 0.15
SDHA-216ENST00000514027 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
SDHA-216ENST00000514027 HMOX1P09601 288 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 TRIM27P14373 513 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 NFKBIBQ15653 356 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 TXNDC2Q86VQ3 553 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 PPIP5K1Q6PFW1 1433 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 SEC24BO95487 1268 aa15.95■□□□□ 0.14
SDHA-216ENST00000514027 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
SDHA-216ENST00000514027 IL16Q14005 1332 aa15.94■□□□□ 0.14
SDHA-216ENST00000514027 METP08581 1390 aa15.94■□□□□ 0.14
SDHA-216ENST00000514027 RRP9O43818 475 aaKnown RBP15.94■□□□□ 0.14
SDHA-216ENST00000514027 FCHSD2O94868 740 aa15.94■□□□□ 0.14
SDHA-216ENST00000514027 NME9Q86XW9 330 aa15.94■□□□□ 0.14
SDHA-216ENST00000514027 EMILIN1Q9Y6C2 1016 aa15.94■□□□□ 0.14
SDHA-216ENST00000514027 MAP2P11137 1827 aaKnown RBP15.93■□□□□ 0.14
SDHA-216ENST00000514027 WASLO00401 505 aaPredicted RBP15.93■□□□□ 0.14
SDHA-216ENST00000514027 ATF7IPQ6VMQ6 1270 aa15.93■□□□□ 0.14
SDHA-216ENST00000514027 NRXN3Q9Y4C0 1643 aa15.93■□□□□ 0.14
SDHA-216ENST00000514027 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
SDHA-216ENST00000514027 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
SDHA-216ENST00000514027 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
SDHA-216ENST00000514027 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
SDHA-216ENST00000514027 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
SDHA-216ENST00000514027 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.91■□□□□ 0.14
SDHA-216ENST00000514027 EDC4Q6P2E9 1401 aaKnown RBP15.91■□□□□ 0.14
SDHA-216ENST00000514027 USP19O94966 1318 aa15.91■□□□□ 0.14
SDHA-216ENST00000514027 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
SDHA-216ENST00000514027 ZMYM3Q14202 1370 aa15.9■□□□□ 0.14
SDHA-216ENST00000514027 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
SDHA-216ENST00000514027 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms