RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 MMP16P51512 607 aa8.15□□□□□ -1.1
NIPBL-207ENST00000513819 NUDT12Q9BQG2 462 aa8.15□□□□□ -1.1
NIPBL-207ENST00000513819 ALG2Q9H553 416 aa8.15□□□□□ -1.1
NIPBL-207ENST00000513819 TJAP1Q5JTD0 557 aa8.14□□□□□ -1.11
NIPBL-207ENST00000513819 EVA1BQ9NVM1 165 aa8.14□□□□□ -1.11
NIPBL-207ENST00000513819 FBXO45P0C2W1 286 aa8.13□□□□□ -1.11
NIPBL-207ENST00000513819 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
NIPBL-207ENST00000513819 NR1H3Q13133 447 aa8.13□□□□□ -1.11
NIPBL-207ENST00000513819 IL21Q9HBE4 155 aa8.13□□□□□ -1.11
NIPBL-207ENST00000513819 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
NIPBL-207ENST00000513819 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
NIPBL-207ENST00000513819 MYT1LQ9UL68 1186 aa8.12□□□□□ -1.11
NIPBL-207ENST00000513819 RFX1P22670 979 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 SOX11P35716 441 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 CCDC24Q8N4L8 307 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
NIPBL-207ENST00000513819 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
NIPBL-207ENST00000513819 ZC3H4Q9UPT8 1303 aaKnown RBP8.1□□□□□ -1.11
NIPBL-207ENST00000513819 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
NIPBL-207ENST00000513819 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
NIPBL-207ENST00000513819 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
NIPBL-207ENST00000513819 PTCRAQ6ISU1 281 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-207ENST00000513819 PALM3A6NDB9 673 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-207ENST00000513819 S1PR4O95977 384 aa8.08□□□□□ -1.12
NIPBL-207ENST00000513819 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
NIPBL-207ENST00000513819 UNC93B1Q9H1C4 597 aa8.08□□□□□ -1.12
NIPBL-207ENST00000513819 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
NIPBL-207ENST00000513819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-207ENST00000513819 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
NIPBL-207ENST00000513819 OCSTAMPQ9BR26 566 aa8.07□□□□□ -1.12
NIPBL-207ENST00000513819 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-207ENST00000513819 PDIA4P13667 645 aaKnown RBP8.06□□□□□ -1.12
NIPBL-207ENST00000513819 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-207ENST00000513819 PTK2Q05397 1052 aa8.06□□□□□ -1.12
NIPBL-207ENST00000513819 NBPF14Q5TI25 921 aa8.06□□□□□ -1.12
NIPBL-207ENST00000513819 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
NIPBL-207ENST00000513819 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
NIPBL-207ENST00000513819 PIK3CDO00329 1044 aa8.05□□□□□ -1.12
NIPBL-207ENST00000513819 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.12
NIPBL-207ENST00000513819 PBXIP1Q96AQ6 731 aa8.05□□□□□ -1.12
NIPBL-207ENST00000513819 FCF1Q9Y324 198 aaKnown RBP8.05□□□□□ -1.12
NIPBL-207ENST00000513819 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
NIPBL-207ENST00000513819 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
NIPBL-207ENST00000513819 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-207ENST00000513819 SRPK2P78362 688 aaKnown RBP8.03□□□□□ -1.12
NIPBL-207ENST00000513819 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-207ENST00000513819 LINC01559Q495D7 138 aa8.03□□□□□ -1.12
NIPBL-207ENST00000513819 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
NIPBL-207ENST00000513819 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
NIPBL-207ENST00000513819 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
NIPBL-207ENST00000513819 MAFBQ9Y5Q3 323 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-207ENST00000513819 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
NIPBL-207ENST00000513819 ATP9BO43861 1147 aa8.02□□□□□ -1.13
NIPBL-207ENST00000513819 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
NIPBL-207ENST00000513819 BAP1Q92560 729 aa8.02□□□□□ -1.13
NIPBL-207ENST00000513819 CARD14Q9BXL6 1004 aa8.02□□□□□ -1.13
NIPBL-207ENST00000513819 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
NIPBL-207ENST00000513819 FAM174AQ8TBP5 190 aa8.01□□□□□ -1.13
NIPBL-207ENST00000513819 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
NIPBL-207ENST00000513819 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
NIPBL-207ENST00000513819 SKIP12755 728 aa8□□□□□ -1.13
NIPBL-207ENST00000513819 KCNC4Q03721 635 aa8□□□□□ -1.13
NIPBL-207ENST00000513819 FOXJ1Q92949 421 aa8□□□□□ -1.13
NIPBL-207ENST00000513819 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
NIPBL-207ENST00000513819 AGERQ15109 404 aa7.99□□□□□ -1.13
NIPBL-207ENST00000513819 TRAIPQ9BWF2 469 aa7.99□□□□□ -1.13
NIPBL-207ENST00000513819 ITGBL1O95965 494 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-207ENST00000513819 C4orf48Q5BLP8 95 aa7.98□□□□□ -1.13
NIPBL-207ENST00000513819 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
NIPBL-207ENST00000513819 DEPDC4Q8N2C3 294 aa7.98□□□□□ -1.13
NIPBL-207ENST00000513819 ZNF511Q8NB15 262 aa7.98□□□□□ -1.13
NIPBL-207ENST00000513819 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
NIPBL-207ENST00000513819 RNF223E7ERA6 249 aa7.97□□□□□ -1.13
NIPBL-207ENST00000513819 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
NIPBL-207ENST00000513819 DZIP3Q86Y13 1208 aaKnown RBP7.97□□□□□ -1.13
NIPBL-207ENST00000513819 RNF135Q8IUD6 432 aa7.97□□□□□ -1.13
NIPBL-207ENST00000513819 PODXL2Q9NZ53 605 aa7.97□□□□□ -1.13
NIPBL-207ENST00000513819 CARNS1A5YM72 827 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 USP17L3A6NCW0 530 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 USP17L4A6NCW7 530 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 MCCD1P59942 119 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-207ENST00000513819 SH3BP2P78314 561 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 ERFEQ4G0M1 354 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 PLA2G2CQ5R387 149 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 USP17L2Q6R6M4 530 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 USP17L1Q7RTZ2 530 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 BPHLQ86WA6 291 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-207ENST00000513819 PHTF2Q8N3S3 785 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 NFATC2IPQ8NCF5 419 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 VRTNQ9H8Y1 702 aa7.96□□□□□ -1.14
NIPBL-207ENST00000513819 CSB-PGBD3P0DP91 1061 aa7.95□□□□□ -1.14
NIPBL-207ENST00000513819 KANK4Q5T7N3 995 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-207ENST00000513819 ZBTB24O43167 697 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-207ENST00000513819 TSGA10IPQ3SY00 556 aa7.94□□□□□ -1.14
NIPBL-207ENST00000513819 PLPP7Q8NBV4 271 aa7.94□□□□□ -1.14
NIPBL-207ENST00000513819 GIGYF1O75420 1035 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-207ENST00000513819 ATG7O95352 703 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms