RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
ATP2C1-221ENST00000513801 HMGN5P82970 282 aaKnown RBP15.28■□□□□ 0.04
ATP2C1-221ENST00000513801 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
ATP2C1-221ENST00000513801 NOL8Q76FK4 1167 aaKnown RBP15.28■□□□□ 0.04
ATP2C1-221ENST00000513801 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
ATP2C1-221ENST00000513801 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.04
ATP2C1-221ENST00000513801 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.03
ATP2C1-221ENST00000513801 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
ATP2C1-221ENST00000513801 SMARCA5O60264 1052 aaPredicted RBP15.26■□□□□ 0.03
ATP2C1-221ENST00000513801 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATP2C1-221ENST00000513801 CLASP1Q7Z460 1538 aa15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 NUCB2P80303 420 aa15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 TSPY26PQ9H489 355 aa15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 PYCARDQ9ULZ3 195 aa15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 A2MP01023 1474 aa15.25■□□□□ 0.03
ATP2C1-221ENST00000513801 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 ADCY5O95622 1261 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 DTNBO60941 627 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
ATP2C1-221ENST00000513801 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 ZBTB40Q9NUA8 1239 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 CHMP4CQ96CF2 233 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 ST7Q9NRC1 585 aa15.23■□□□□ 0.03
ATP2C1-221ENST00000513801 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 CUL7Q14999 1698 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
ATP2C1-221ENST00000513801 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 SCAPERQ9BY12 1400 aa15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 ABCC2Q92887 1545 aa15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 CEP170Q5SW79 1584 aa15.21■□□□□ 0.03
ATP2C1-221ENST00000513801 CAPN2P17655 700 aa15.21■□□□□ 0.02
ATP2C1-221ENST00000513801 APBB1O00213 710 aa15.2■□□□□ 0.02
ATP2C1-221ENST00000513801 ANKRD7Q92527 254 aa15.2■□□□□ 0.02
ATP2C1-221ENST00000513801 GSPT1P15170 499 aaKnown RBP15.2■□□□□ 0.02
ATP2C1-221ENST00000513801 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
ATP2C1-221ENST00000513801 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 V9GYY5 206 aaPredicted RBP15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 TRIM6-TRIM34B2RNG4 842 aa15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 AP5Z1O43299 807 aa15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 KCNF1Q9H3M0 494 aa15.19■□□□□ 0.02
ATP2C1-221ENST00000513801 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 U2AF1L5P0DN76 240 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 U2AF1Q01081 240 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 WDR62O43379 1518 aa15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
ATP2C1-221ENST00000513801 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 LAMC3Q9Y6N6 1575 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 OGFRQ9NZT2 677 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 MTHFSP49914 203 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
ATP2C1-221ENST00000513801 RABEP1Q15276 862 aa15.16■□□□□ 0.02
ATP2C1-221ENST00000513801 C9orf84Q5VXU9 1444 aa15.16■□□□□ 0.02
ATP2C1-221ENST00000513801 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
ATP2C1-221ENST00000513801 SPTLC3Q9NUV7 552 aa15.16■□□□□ 0.02
ATP2C1-221ENST00000513801 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 CDC45O75419 566 aa15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 C16orf45Q96MC5 204 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
ATP2C1-221ENST00000513801 NPHP1O15259 732 aa15.14■□□□□ 0.01
ATP2C1-221ENST00000513801 KIAA1524Q8TCG1 905 aa15.14■□□□□ 0.01
ATP2C1-221ENST00000513801 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-221ENST00000513801 ELL2O00472 640 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-221ENST00000513801 TERF2Q15554 542 aa15.14■□□□□ 0.01
ATP2C1-221ENST00000513801 NUP153P49790 1475 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 EIF4G3O43432 1585 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 CDCA8Q53HL2 280 aa15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 PLXNC1O60486 1568 aa15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
ATP2C1-221ENST00000513801 LRMPQ12912 555 aa15.12■□□□□ 0.01
ATP2C1-221ENST00000513801 TIGD1Q96MW7 591 aa15.12■□□□□ 0.01
ATP2C1-221ENST00000513801 ZNF592Q92610 1267 aa15.12■□□□□ 0.01
ATP2C1-221ENST00000513801 TMX1Q9H3N1 280 aa15.12■□□□□ 0.01
ATP2C1-221ENST00000513801 CTIFO43310 598 aaKnown RBP15.11■□□□□ 0.01
ATP2C1-221ENST00000513801 MLECQ14165 292 aa15.11■□□□□ 0.01
ATP2C1-221ENST00000513801 FEZ1Q99689 392 aa15.11■□□□□ 0.01
ATP2C1-221ENST00000513801 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
ATP2C1-221ENST00000513801 ARHGAP31Q2M1Z3 1444 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms