RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
SRPK1-213ENST00000513367 ZNF142P52746 1687 aaPredicted RBP10.62□□□□□ -0.71
SRPK1-213ENST00000513367 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
SRPK1-213ENST00000513367 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
SRPK1-213ENST00000513367 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
SRPK1-213ENST00000513367 RNF223E7ERA6 249 aa10.61□□□□□ -0.71
SRPK1-213ENST00000513367 ZMYM3Q14202 1370 aa10.61□□□□□ -0.71
SRPK1-213ENST00000513367 MYO5CQ9NQX4 1742 aa10.61□□□□□ -0.71
SRPK1-213ENST00000513367 KDM5CP41229 1560 aa10.6□□□□□ -0.71
SRPK1-213ENST00000513367 MROH2AA6NES4 1674 aa10.6□□□□□ -0.71
SRPK1-213ENST00000513367 ZPR1O75312 459 aa10.6□□□□□ -0.71
SRPK1-213ENST00000513367 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
SRPK1-213ENST00000513367 CEP170BQ9Y4F5 1589 aaPredicted RBP10.6□□□□□ -0.71
SRPK1-213ENST00000513367 RANGAP1P46060 587 aaPredicted RBP10.59□□□□□ -0.71
SRPK1-213ENST00000513367 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
SRPK1-213ENST00000513367 SWT1Q5T5J6 900 aaKnown RBP10.58□□□□□ -0.72
SRPK1-213ENST00000513367 FAM187AA6NFU0 413 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 ST8SIA5O15466 376 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PRR20EP86478 221 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PRR20CP86479 221 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PRR20DP86480 221 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PRR20BP86481 221 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PRR20AP86496 221 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 PDIA6Q15084 440 aa10.57□□□□□ -0.72
SRPK1-213ENST00000513367 POLR1AO95602 1720 aaPredicted RBP10.57□□□□□ -0.72
SRPK1-213ENST00000513367 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
SRPK1-213ENST00000513367 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
SRPK1-213ENST00000513367 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
SRPK1-213ENST00000513367 CLTCQ00610 1675 aaKnown RBP10.56□□□□□ -0.72
SRPK1-213ENST00000513367 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
SRPK1-213ENST00000513367 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
SRPK1-213ENST00000513367 ARHGAP5Q13017 1502 aa10.54□□□□□ -0.72
SRPK1-213ENST00000513367 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
SRPK1-213ENST00000513367 LIAT1Q6ZQX7 453 aa10.54□□□□□ -0.72
SRPK1-213ENST00000513367 VWDEQ8N2E2 1590 aa10.54□□□□□ -0.72
SRPK1-213ENST00000513367 NEURL4Q96JN8 1562 aa10.54□□□□□ -0.72
SRPK1-213ENST00000513367 DNMT1P26358 1616 aaKnown RBP10.54□□□□□ -0.72
SRPK1-213ENST00000513367 TLL1O43897 1013 aa10.53□□□□□ -0.72
SRPK1-213ENST00000513367 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
SRPK1-213ENST00000513367 KIDINS220Q9ULH0 1771 aa10.52□□□□□ -0.72
SRPK1-213ENST00000513367 GDF9O60383 454 aa10.52□□□□□ -0.73
SRPK1-213ENST00000513367 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
SRPK1-213ENST00000513367 A2ML1A8K2U0 1454 aa10.51□□□□□ -0.73
SRPK1-213ENST00000513367 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
SRPK1-213ENST00000513367 STRCP1A6NGW2 1772 aa10.51□□□□□ -0.73
SRPK1-213ENST00000513367 KIF14Q15058 1648 aa10.51□□□□□ -0.73
SRPK1-213ENST00000513367 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
SRPK1-213ENST00000513367 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
SRPK1-213ENST00000513367 SLF2Q8IX21 1173 aa10.5□□□□□ -0.73
SRPK1-213ENST00000513367 PCDHB3Q9Y5E6 796 aa10.5□□□□□ -0.73
SRPK1-213ENST00000513367 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
SRPK1-213ENST00000513367 LRRC7Q96NW7 1537 aa10.49□□□□□ -0.73
SRPK1-213ENST00000513367 CDC42BPBQ9Y5S2 1711 aa10.49□□□□□ -0.73
SRPK1-213ENST00000513367 ANKLE2Q86XL3 938 aa10.48□□□□□ -0.73
SRPK1-213ENST00000513367 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
SRPK1-213ENST00000513367 NECTIN2Q92692 538 aa10.48□□□□□ -0.73
SRPK1-213ENST00000513367 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
SRPK1-213ENST00000513367 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
SRPK1-213ENST00000513367 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
SRPK1-213ENST00000513367 S1PR4O95977 384 aa10.47□□□□□ -0.73
SRPK1-213ENST00000513367 GGT6Q6P531 493 aa10.47□□□□□ -0.73
SRPK1-213ENST00000513367 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
SRPK1-213ENST00000513367 DACH1Q9UI36 760 aa10.47□□□□□ -0.73
SRPK1-213ENST00000513367 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
SRPK1-213ENST00000513367 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
SRPK1-213ENST00000513367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.46□□□□□ -0.74
SRPK1-213ENST00000513367 NPHP4O75161 1426 aaPredicted RBP10.46□□□□□ -0.74
SRPK1-213ENST00000513367 PADI6Q6TGC4 694 aa10.45□□□□□ -0.74
SRPK1-213ENST00000513367 ABCC1P33527 1531 aa10.44□□□□□ -0.74
SRPK1-213ENST00000513367 WFS1O76024 890 aa10.44□□□□□ -0.74
SRPK1-213ENST00000513367 OSBPP22059 807 aa10.44□□□□□ -0.74
SRPK1-213ENST00000513367 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
SRPK1-213ENST00000513367 IQGAP1P46940 1657 aa10.43□□□□□ -0.74
SRPK1-213ENST00000513367 SYNMO15061 1565 aa10.43□□□□□ -0.74
SRPK1-213ENST00000513367 FBXO31Q5XUX0 539 aaPredicted RBP10.42□□□□□ -0.74
SRPK1-213ENST00000513367 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
SRPK1-213ENST00000513367 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
SRPK1-213ENST00000513367 MED14O60244 1454 aa10.42□□□□□ -0.74
SRPK1-213ENST00000513367 DEPDC5O75140 1603 aa10.41□□□□□ -0.74
SRPK1-213ENST00000513367 SAMD9LQ8IVG5 1584 aa10.41□□□□□ -0.74
SRPK1-213ENST00000513367 THEMISQ8N1K5 641 aaPredicted RBP10.41□□□□□ -0.74
SRPK1-213ENST00000513367 EYA1Q99502 592 aa10.41□□□□□ -0.74
SRPK1-213ENST00000513367 NPDC1Q9NQX5 325 aaPredicted RBP10.41□□□□□ -0.74
SRPK1-213ENST00000513367 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
SRPK1-213ENST00000513367 FAM135BQ49AJ0 1406 aa10.41□□□□□ -0.74
SRPK1-213ENST00000513367 TNRQ92752 1358 aa10.4□□□□□ -0.74
SRPK1-213ENST00000513367 TROQ12816 1431 aaPredicted RBP10.4□□□□□ -0.75
SRPK1-213ENST00000513367 PREX2Q70Z35 1606 aa10.4□□□□□ -0.75
SRPK1-213ENST00000513367 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
SRPK1-213ENST00000513367 NFX1Q12986 1120 aaKnown RBP10.39□□□□□ -0.75
SRPK1-213ENST00000513367 PRR14Q9BWN1 585 aa10.39□□□□□ -0.75
SRPK1-213ENST00000513367 PKD2L1Q9P0L9 805 aa10.39□□□□□ -0.75
SRPK1-213ENST00000513367 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
SRPK1-213ENST00000513367 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
SRPK1-213ENST00000513367 A2MP01023 1474 aa10.38□□□□□ -0.75
SRPK1-213ENST00000513367 CLIP1P30622 1438 aa10.38□□□□□ -0.75
SRPK1-213ENST00000513367 PLXNC1O60486 1568 aa10.38□□□□□ -0.75
SRPK1-213ENST00000513367 FOXC1Q12948 553 aa10.37□□□□□ -0.75
SRPK1-213ENST00000513367 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms