RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
MATR3-221ENST00000513121 CABP1Q9NZU7 370 aa27.35■■□□□ 1.97
MATR3-221ENST00000513121 PPIP5K1Q6PFW1 1433 aa27.34■■□□□ 1.97
MATR3-221ENST00000513121 RALGAPBQ86X10 1494 aa27.34■■□□□ 1.97
MATR3-221ENST00000513121 VPS72Q15906 364 aa27.33■■□□□ 1.97
MATR3-221ENST00000513121 TOPAZ1Q8N9V7 1692 aa27.33■■□□□ 1.97
MATR3-221ENST00000513121 TONSLQ96HA7 1378 aa27.33■■□□□ 1.97
MATR3-221ENST00000513121 ABCA3Q99758 1704 aa27.33■■□□□ 1.96
MATR3-221ENST00000513121 BTG4Q9NY30 223 aa27.31■■□□□ 1.96
MATR3-221ENST00000513121 EVC2Q86UK5 1308 aa27.3■■□□□ 1.96
MATR3-221ENST00000513121 GLI3P10071 1580 aa27.3■■□□□ 1.96
MATR3-221ENST00000513121 QRICH2Q9H0J4 1663 aa27.3■■□□□ 1.96
MATR3-221ENST00000513121 ITSN1Q15811 1721 aa27.3■■□□□ 1.96
MATR3-221ENST00000513121 CARD11Q9BXL7 1154 aa27.29■■□□□ 1.96
MATR3-221ENST00000513121 ABTB2Q8N961 1025 aa27.27■■□□□ 1.96
MATR3-221ENST00000513121 CCDC9Q9Y3X0 531 aaKnown RBP27.27■■□□□ 1.96
MATR3-221ENST00000513121 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.27■■□□□ 1.96
MATR3-221ENST00000513121 ZC3H6P61129 1189 aaKnown RBP27.26■■□□□ 1.95
MATR3-221ENST00000513121 KIAA0232Q92628 1395 aa27.25■■□□□ 1.95
MATR3-221ENST00000513121 CHRNA2Q15822 529 aa27.25■■□□□ 1.95
MATR3-221ENST00000513121 PRDM11Q9NQV5 511 aa27.25■■□□□ 1.95
MATR3-221ENST00000513121 ATAD2Q6PL18 1390 aa27.24■■□□□ 1.95
MATR3-221ENST00000513121 ONECUT3O60422 494 aaPredicted RBP27.24■■□□□ 1.95
MATR3-221ENST00000513121 SEPT12Q8IYM1 358 aa27.24■■□□□ 1.95
MATR3-221ENST00000513121 PLCH1Q4KWH8 1693 aa27.23■■□□□ 1.95
MATR3-221ENST00000513121 CRYBG1Q9Y4K1 1723 aa27.22■■□□□ 1.95
MATR3-221ENST00000513121 USP19O94966 1318 aa27.2■■□□□ 1.95
MATR3-221ENST00000513121 USP6P35125 1406 aa27.2■■□□□ 1.94
MATR3-221ENST00000513121 NWD2Q9ULI1 1742 aa27.19■■□□□ 1.94
MATR3-221ENST00000513121 SSH2Q76I76 1423 aa27.19■■□□□ 1.94
MATR3-221ENST00000513121 FAM98CQ17RN3 349 aaKnown RBP27.17■■□□□ 1.94
MATR3-221ENST00000513121 NLRP13Q86W25 1043 aa27.17■■□□□ 1.94
MATR3-221ENST00000513121 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
MATR3-221ENST00000513121 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
MATR3-221ENST00000513121 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
MATR3-221ENST00000513121 GCP02774 474 aa27.16■■□□□ 1.94
MATR3-221ENST00000513121 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
MATR3-221ENST00000513121 BRD4O60885 1362 aaPredicted RBP27.15■■□□□ 1.94
MATR3-221ENST00000513121 SBNO2Q9Y2G9 1366 aa27.15■■□□□ 1.94
MATR3-221ENST00000513121 NLRP6P59044 892 aa27.14■■□□□ 1.94
MATR3-221ENST00000513121 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
MATR3-221ENST00000513121 TTC21BQ7Z4L5 1316 aa27.13■■□□□ 1.93
MATR3-221ENST00000513121 PHRF1Q9P1Y6 1649 aaKnown RBP27.12■■□□□ 1.93
MATR3-221ENST00000513121 ZNF692Q9BU19 519 aaPredicted RBP27.12■■□□□ 1.93
MATR3-221ENST00000513121 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
MATR3-221ENST00000513121 CPDO75976 1380 aa27.11■■□□□ 1.93
MATR3-221ENST00000513121 EP400Q96L91 3159 aa27.11■■□□□ 1.93
MATR3-221ENST00000513121 NRKQ7Z2Y5 1582 aa27.1■■□□□ 1.93
MATR3-221ENST00000513121 CPSF1Q10570 1443 aaKnown RBP27.1■■□□□ 1.93
MATR3-221ENST00000513121 KRT27Q7Z3Y8 459 aa27.1■■□□□ 1.93
MATR3-221ENST00000513121 TESK2Q96S53 571 aa27.1■■□□□ 1.93
MATR3-221ENST00000513121 ST20-MTHFSA0A0A6YYL1 179 aa27.09■■□□□ 1.93
MATR3-221ENST00000513121 A0A0G2JS52 829 aa27.09■■□□□ 1.93
MATR3-221ENST00000513121 MYT1Q01538 1121 aa27.09■■□□□ 1.93
MATR3-221ENST00000513121 SPATA31A1Q5TZJ5 1347 aa27.09■■□□□ 1.93
MATR3-221ENST00000513121 LARP1Q6PKG0 1096 aaKnown RBP27.07■■□□□ 1.92
MATR3-221ENST00000513121 SLC12A5Q9H2X9 1139 aa27.07■■□□□ 1.92
MATR3-221ENST00000513121 CAMTA1Q9Y6Y1 1673 aa27.07■■□□□ 1.92
MATR3-221ENST00000513121 EVA1CP58658 441 aa27.06■■□□□ 1.92
MATR3-221ENST00000513121 ZBTB7CA1YPR0 619 aa27.05■■□□□ 1.92
MATR3-221ENST00000513121 CCDC125Q86Z20 511 aa27.05■■□□□ 1.92
MATR3-221ENST00000513121 TMC1Q8TDI8 760 aa27.05■■□□□ 1.92
MATR3-221ENST00000513121 ZRANB1Q9UGI0 708 aa27.05■■□□□ 1.92
MATR3-221ENST00000513121 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
MATR3-221ENST00000513121 USP35Q9P2H5 1018 aa27.04■■□□□ 1.92
MATR3-221ENST00000513121 CD163L1Q9NR16 1453 aa27.04■■□□□ 1.92
MATR3-221ENST00000513121 BRWD3Q6RI45 1802 aa27.04■■□□□ 1.92
MATR3-221ENST00000513121 FAM182BQ5T319 152 aa27.03■■□□□ 1.92
MATR3-221ENST00000513121 SLIT3O75094 1523 aa27.02■■□□□ 1.92
MATR3-221ENST00000513121 TTC21AQ8NDW8 1320 aa27.01■■□□□ 1.91
MATR3-221ENST00000513121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.01■■□□□ 1.914e-7■■■□□ 14.8
MATR3-221ENST00000513121 PIK3C2AO00443 1686 aa27.01■■□□□ 1.91
MATR3-221ENST00000513121 SOX12O15370 315 aa27■■□□□ 1.91
MATR3-221ENST00000513121 BLMP54132 1417 aaPredicted RBP26.99■■□□□ 1.91
MATR3-221ENST00000513121 DEFB132Q7Z7B7 95 aa26.99■■□□□ 1.91
MATR3-221ENST00000513121 PUS7Q96PZ0 661 aaKnown RBP26.99■■□□□ 1.91
MATR3-221ENST00000513121 AXIN2Q9Y2T1 843 aa26.99■■□□□ 1.91
MATR3-221ENST00000513121 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
MATR3-221ENST00000513121 NME9Q86XW9 330 aa26.98■■□□□ 1.91
MATR3-221ENST00000513121 AATKQ6ZMQ8 1374 aa26.97■■□□□ 1.91
MATR3-221ENST00000513121 ARHGEF25Q86VW2 580 aa26.97■■□□□ 1.91
MATR3-221ENST00000513121 COL5A2P05997 1499 aaPredicted RBP26.96■■□□□ 1.91
MATR3-221ENST00000513121 BARGINQ6ZT62 677 aa26.96■■□□□ 1.91
MATR3-221ENST00000513121 TCP11L2Q8N4U5 519 aa26.96■■□□□ 1.91
MATR3-221ENST00000513121 AKAP12Q02952 1782 aa26.96■■□□□ 1.91
MATR3-221ENST00000513121 USP47Q96K76 1375 aa26.95■■□□□ 1.9
MATR3-221ENST00000513121 THSD7AQ9UPZ6 1657 aa26.95■■□□□ 1.9
MATR3-221ENST00000513121 HDGFL2Q7Z4V5 671 aaPredicted RBP26.94■■□□□ 1.9
MATR3-221ENST00000513121 KCNH5Q8NCM2 988 aa26.94■■□□□ 1.9
MATR3-221ENST00000513121 A0A1W2PP64 1363 aa26.94■■□□□ 1.9
MATR3-221ENST00000513121 CLSPNQ9HAW4 1339 aa26.93■■□□□ 1.9
MATR3-221ENST00000513121 TIMELESSQ9UNS1 1208 aa26.93■■□□□ 1.9
MATR3-221ENST00000513121 USP31Q70CQ4 1352 aa26.93■■□□□ 1.9
MATR3-221ENST00000513121 TERF2IPQ9NYB0 399 aa26.91■■□□□ 1.9
MATR3-221ENST00000513121 SF3B2Q13435 895 aaKnown RBP26.89■■□□□ 1.9
MATR3-221ENST00000513121 THRAP3Q9Y2W1 955 aaKnown RBP26.88■■□□□ 1.89
MATR3-221ENST00000513121 NFAT5O94916 1531 aa26.88■■□□□ 1.89
MATR3-221ENST00000513121 CRB1P82279 1406 aa26.88■■□□□ 1.89
MATR3-221ENST00000513121 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
MATR3-221ENST00000513121 EDC4Q6P2E9 1401 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms