RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SRCAPQ6ZRS2 3230 aa18.25■□□□□ 0.51
VEGFA-216ENST00000512683 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
VEGFA-216ENST00000512683 A0A0G2JS52 829 aa18.23■□□□□ 0.51
VEGFA-216ENST00000512683 MYT1Q01538 1121 aa18.23■□□□□ 0.51
VEGFA-216ENST00000512683 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
VEGFA-216ENST00000512683 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
VEGFA-216ENST00000512683 EP400Q96L91 3159 aa18.22■□□□□ 0.51
VEGFA-216ENST00000512683 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-216ENST00000512683 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
VEGFA-216ENST00000512683 ACEP12821 1306 aa18.2■□□□□ 0.5
VEGFA-216ENST00000512683 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-216ENST00000512683 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
VEGFA-216ENST00000512683 ATP7BP35670 1465 aa18.18■□□□□ 0.5
VEGFA-216ENST00000512683 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
VEGFA-216ENST00000512683 EVA1CP58658 441 aa18.17■□□□□ 0.5
VEGFA-216ENST00000512683 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
VEGFA-216ENST00000512683 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
VEGFA-216ENST00000512683 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
VEGFA-216ENST00000512683 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
VEGFA-216ENST00000512683 C11orf95C9JLR9 678 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-216ENST00000512683 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
VEGFA-216ENST00000512683 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-216ENST00000512683 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.5
VEGFA-216ENST00000512683 NBPF1Q3BBV0 1214 aa18.14■□□□□ 0.49
VEGFA-216ENST00000512683 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
VEGFA-216ENST00000512683 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
VEGFA-216ENST00000512683 CPDO75976 1380 aa18.14■□□□□ 0.49
VEGFA-216ENST00000512683 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
VEGFA-216ENST00000512683 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
VEGFA-216ENST00000512683 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
VEGFA-216ENST00000512683 CHRNA2Q15822 529 aa18.12■□□□□ 0.49
VEGFA-216ENST00000512683 PLCH1Q4KWH8 1693 aa18.12■□□□□ 0.49
VEGFA-216ENST00000512683 GCP02774 474 aa18.11■□□□□ 0.49
VEGFA-216ENST00000512683 EN1Q05925 392 aaPredicted RBP18.11■□□□□ 0.49
VEGFA-216ENST00000512683 PDE3BQ13370 1112 aa18.11■□□□□ 0.49
VEGFA-216ENST00000512683 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
VEGFA-216ENST00000512683 USP19O94966 1318 aa18.11■□□□□ 0.49
VEGFA-216ENST00000512683 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
VEGFA-216ENST00000512683 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
VEGFA-216ENST00000512683 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
VEGFA-216ENST00000512683 PARD3Q8TEW0 1356 aa18.09■□□□□ 0.49
VEGFA-216ENST00000512683 CAMKK2Q96RR4 588 aa18.08■□□□□ 0.48
VEGFA-216ENST00000512683 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.48
VEGFA-216ENST00000512683 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.48
VEGFA-216ENST00000512683 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
VEGFA-216ENST00000512683 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 NRAPQ86VF7 1730 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 CABP2Q9NPB3 220 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 CABP1Q9NZU7 370 aa18.06■□□□□ 0.48
VEGFA-216ENST00000512683 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
VEGFA-216ENST00000512683 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
VEGFA-216ENST00000512683 TRIM37O94972 964 aa18.05■□□□□ 0.48
VEGFA-216ENST00000512683 APBA3O96018 575 aa18.05■□□□□ 0.48
VEGFA-216ENST00000512683 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
VEGFA-216ENST00000512683 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
VEGFA-216ENST00000512683 NLRP6P59044 892 aa18.04■□□□□ 0.48
VEGFA-216ENST00000512683 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
VEGFA-216ENST00000512683 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-216ENST00000512683 EZH2Q15910 746 aaKnown RBP18.03■□□□□ 0.48
VEGFA-216ENST00000512683 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
VEGFA-216ENST00000512683 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
VEGFA-216ENST00000512683 THSD7AQ9UPZ6 1657 aa18.02■□□□□ 0.47
VEGFA-216ENST00000512683 AATKQ6ZMQ8 1374 aa18.02■□□□□ 0.47
VEGFA-216ENST00000512683 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
VEGFA-216ENST00000512683 KCNH5Q8NCM2 988 aa18.01■□□□□ 0.47
VEGFA-216ENST00000512683 CDCA7Q9BWT1 371 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-216ENST00000512683 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
VEGFA-216ENST00000512683 USP6P35125 1406 aa17.99■□□□□ 0.47
VEGFA-216ENST00000512683 CRYBG1Q9Y4K1 1723 aa17.99■□□□□ 0.47
VEGFA-216ENST00000512683 CRB1P82279 1406 aa17.98■□□□□ 0.47
VEGFA-216ENST00000512683 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
VEGFA-216ENST00000512683 PLSCR1O15162 318 aa17.96■□□□□ 0.47
VEGFA-216ENST00000512683 ARHGEF25Q86VW2 580 aa17.96■□□□□ 0.47
VEGFA-216ENST00000512683 LRP5O75197 1615 aa17.96■□□□□ 0.47
VEGFA-216ENST00000512683 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
VEGFA-216ENST00000512683 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-216ENST00000512683 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
VEGFA-216ENST00000512683 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
VEGFA-216ENST00000512683 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
VEGFA-216ENST00000512683 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
VEGFA-216ENST00000512683 DDB1Q16531 1140 aa17.94■□□□□ 0.46
VEGFA-216ENST00000512683 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
VEGFA-216ENST00000512683 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
VEGFA-216ENST00000512683 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
VEGFA-216ENST00000512683 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
VEGFA-216ENST00000512683 NRKQ7Z2Y5 1582 aa17.92■□□□□ 0.46
VEGFA-216ENST00000512683 BCL11BQ9C0K0 894 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-216ENST00000512683 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
VEGFA-216ENST00000512683 LMO7Q8WWI1 1683 aa17.91■□□□□ 0.46
VEGFA-216ENST00000512683 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
VEGFA-216ENST00000512683 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
VEGFA-216ENST00000512683 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
VEGFA-216ENST00000512683 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 BCL9O00512 1426 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 SLIT3O75094 1523 aa17.9■□□□□ 0.46
VEGFA-216ENST00000512683 ZBTB7CA1YPR0 619 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms