RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-230ENST00000511944 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
NR1I3-230ENST00000511944 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-230ENST00000511944 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-230ENST00000511944 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
NR1I3-230ENST00000511944 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
NR1I3-230ENST00000511944 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
NR1I3-230ENST00000511944 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NR1I3-230ENST00000511944 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-230ENST00000511944 TESK2Q96S53 571 aa12.63□□□□□ -0.39
NR1I3-230ENST00000511944 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
NR1I3-230ENST00000511944 PTPRMP28827 1452 aa12.61□□□□□ -0.39
NR1I3-230ENST00000511944 TMF1P82094 1093 aa12.61□□□□□ -0.39
NR1I3-230ENST00000511944 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
NR1I3-230ENST00000511944 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
NR1I3-230ENST00000511944 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
NR1I3-230ENST00000511944 TECPR2O15040 1411 aa12.6□□□□□ -0.39
NR1I3-230ENST00000511944 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
NR1I3-230ENST00000511944 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
NR1I3-230ENST00000511944 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-230ENST00000511944 MED14O60244 1454 aa12.59□□□□□ -0.39
NR1I3-230ENST00000511944 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
NR1I3-230ENST00000511944 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
NR1I3-230ENST00000511944 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
NR1I3-230ENST00000511944 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
NR1I3-230ENST00000511944 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
NR1I3-230ENST00000511944 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
NR1I3-230ENST00000511944 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-230ENST00000511944 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
NR1I3-230ENST00000511944 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
NR1I3-230ENST00000511944 CPS1P31327 1500 aa12.56□□□□□ -0.4
NR1I3-230ENST00000511944 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
NR1I3-230ENST00000511944 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
NR1I3-230ENST00000511944 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
NR1I3-230ENST00000511944 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
NR1I3-230ENST00000511944 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
NR1I3-230ENST00000511944 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
NR1I3-230ENST00000511944 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
NR1I3-230ENST00000511944 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
NR1I3-230ENST00000511944 ANP32CO43423 234 aa12.52□□□□□ -0.41
NR1I3-230ENST00000511944 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
NR1I3-230ENST00000511944 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
NR1I3-230ENST00000511944 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
NR1I3-230ENST00000511944 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
NR1I3-230ENST00000511944 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
NR1I3-230ENST00000511944 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
NR1I3-230ENST00000511944 G3V3G9 751 aa12.5□□□□□ -0.41
NR1I3-230ENST00000511944 LTKP29376 864 aa12.5□□□□□ -0.41
NR1I3-230ENST00000511944 MYOM1P52179 1685 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 METP08581 1390 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 LHX8Q68G74 356 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
NR1I3-230ENST00000511944 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
NR1I3-230ENST00000511944 ATAD2Q6PL18 1390 aa12.48□□□□□ -0.41
NR1I3-230ENST00000511944 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
NR1I3-230ENST00000511944 KIF3CO14782 793 aa12.46□□□□□ -0.41
NR1I3-230ENST00000511944 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
NR1I3-230ENST00000511944 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
NR1I3-230ENST00000511944 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
NR1I3-230ENST00000511944 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
NR1I3-230ENST00000511944 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-230ENST00000511944 POGKQ9P215 609 aa12.45□□□□□ -0.42
NR1I3-230ENST00000511944 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-230ENST00000511944 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
NR1I3-230ENST00000511944 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-230ENST00000511944 RALBP1Q15311 655 aa12.43□□□□□ -0.42
NR1I3-230ENST00000511944 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
NR1I3-230ENST00000511944 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
NR1I3-230ENST00000511944 BCANQ96GW7 911 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
NR1I3-230ENST00000511944 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
NR1I3-230ENST00000511944 STK26Q9P289 416 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
NR1I3-230ENST00000511944 PDE4AP27815 886 aa12.41□□□□□ -0.42
NR1I3-230ENST00000511944 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
NR1I3-230ENST00000511944 ATP7BP35670 1465 aa12.4□□□□□ -0.42
NR1I3-230ENST00000511944 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
NR1I3-230ENST00000511944 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
NR1I3-230ENST00000511944 NSD2O96028 1365 aa12.4□□□□□ -0.42
NR1I3-230ENST00000511944 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.43
NR1I3-230ENST00000511944 MFSD10Q14728 455 aa12.39□□□□□ -0.43
NR1I3-230ENST00000511944 PANK3Q9H999 370 aa12.39□□□□□ -0.43
NR1I3-230ENST00000511944 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
NR1I3-230ENST00000511944 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms