RNA–Protein interactions for RNA: ENST00000511817.1

XRCC4-205, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene XRCC4, Length 1,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-205ENST00000511817 KDM4AO75164 1064 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 CD46P15529 392 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 PAXIP1Q6ZW49 1069 aaPredicted RBP6.75□□□□□ -1.33
XRCC4-205ENST00000511817 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 CFAP44Q96MT7 982 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 NUDT12Q9BQG2 462 aa6.75□□□□□ -1.33
XRCC4-205ENST00000511817 MAN1A2O60476 641 aa6.74□□□□□ -1.33
XRCC4-205ENST00000511817 ADH1CP00326 375 aa6.74□□□□□ -1.33
XRCC4-205ENST00000511817 USP46P62068 366 aa6.74□□□□□ -1.33
XRCC4-205ENST00000511817 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
XRCC4-205ENST00000511817 GPR161Q8N6U8 529 aaKnown RBP6.73□□□□□ -1.33
XRCC4-205ENST00000511817 WHAMMQ8TF30 809 aa6.73□□□□□ -1.33
XRCC4-205ENST00000511817 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
XRCC4-205ENST00000511817 TLL2Q9Y6L7 1015 aa6.73□□□□□ -1.33
XRCC4-205ENST00000511817 HLA-CQ95604 372 aa6.72□□□□□ -1.33
XRCC4-205ENST00000511817 COL25A1Q9BXS0 654 aaPredicted RBP6.72□□□□□ -1.33
XRCC4-205ENST00000511817 GPR37O15354 613 aa6.71□□□□□ -1.34
XRCC4-205ENST00000511817 VARSP26640 1264 aaKnown RBP6.71□□□□□ -1.34
XRCC4-205ENST00000511817 SEMA3EO15041 775 aa6.7□□□□□ -1.34
XRCC4-205ENST00000511817 PHF20L1A8MW92 1017 aa6.69□□□□□ -1.34
XRCC4-205ENST00000511817 HOXA2O43364 376 aa6.69□□□□□ -1.34
XRCC4-205ENST00000511817 BAG6P46379 1132 aa6.68□□□□□ -1.34
XRCC4-205ENST00000511817 RBM26Q5T8P6 1007 aaKnown RBP6.68□□□□□ -1.34
XRCC4-205ENST00000511817 RETREG3Q86VR2 466 aa6.68□□□□□ -1.34
XRCC4-205ENST00000511817 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
XRCC4-205ENST00000511817 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
XRCC4-205ENST00000511817 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
XRCC4-205ENST00000511817 SYMPKQ92797 1274 aaKnown RBP6.67□□□□□ -1.34
XRCC4-205ENST00000511817 UNC93B1Q9H1C4 597 aa6.67□□□□□ -1.34
XRCC4-205ENST00000511817 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
XRCC4-205ENST00000511817 RNFT1Q5M7Z0 435 aa6.66□□□□□ -1.34
XRCC4-205ENST00000511817 NANOS1Q8WY41 292 aaKnown RBP6.66□□□□□ -1.34
XRCC4-205ENST00000511817 BAP1Q92560 729 aa6.66□□□□□ -1.34
XRCC4-205ENST00000511817 GOLGA2P5Q9HBQ8 144 aa6.66□□□□□ -1.34
XRCC4-205ENST00000511817 GUCA2AQ02747 115 aa6.65□□□□□ -1.34
XRCC4-205ENST00000511817 ZNF511Q8NB15 262 aa6.65□□□□□ -1.34
XRCC4-205ENST00000511817 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.34
XRCC4-205ENST00000511817 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.34
XRCC4-205ENST00000511817 ZIC2O95409 532 aaPredicted RBP6.65□□□□□ -1.35
XRCC4-205ENST00000511817 MS4A1P11836 297 aa6.65□□□□□ -1.35
XRCC4-205ENST00000511817 ZFAND3Q9H8U3 227 aa6.65□□□□□ -1.35
XRCC4-205ENST00000511817 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.35
XRCC4-205ENST00000511817 BMP2P12643 396 aa6.64□□□□□ -1.35
XRCC4-205ENST00000511817 PTPRNQ16849 979 aa6.64□□□□□ -1.35
XRCC4-205ENST00000511817 ITPKCQ96DU7 683 aa6.64□□□□□ -1.35
XRCC4-205ENST00000511817 CDK15Q96Q40 435 aa6.64□□□□□ -1.35
XRCC4-205ENST00000511817 UPP2O95045 317 aa6.63□□□□□ -1.35
XRCC4-205ENST00000511817 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
XRCC4-205ENST00000511817 LINC00528Q8N1L1 170 aa6.63□□□□□ -1.35
XRCC4-205ENST00000511817 FAM174AQ8TBP5 190 aa6.63□□□□□ -1.35
XRCC4-205ENST00000511817 MAP3K10Q02779 954 aa6.62□□□□□ -1.35
XRCC4-205ENST00000511817 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
XRCC4-205ENST00000511817 FURINP09958 794 aa6.61□□□□□ -1.35
XRCC4-205ENST00000511817 SMYD5Q6GMV2 418 aa6.61□□□□□ -1.35
XRCC4-205ENST00000511817 P3H3Q8IVL6 736 aa6.61□□□□□ -1.35
XRCC4-205ENST00000511817 NR5A1Q13285 461 aa6.61□□□□□ -1.35
XRCC4-205ENST00000511817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.61□□□□□ -1.35
XRCC4-205ENST00000511817 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
XRCC4-205ENST00000511817 PTSQ03393 145 aa6.6□□□□□ -1.35
XRCC4-205ENST00000511817 SPTLC1O15269 473 aa6.58□□□□□ -1.36
XRCC4-205ENST00000511817 NR3C2P08235 984 aa6.58□□□□□ -1.36
XRCC4-205ENST00000511817 LYPD4Q6UWN0 246 aa6.58□□□□□ -1.36
XRCC4-205ENST00000511817 ENAMQ9NRM1 1142 aa6.58□□□□□ -1.36
XRCC4-205ENST00000511817 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
XRCC4-205ENST00000511817 ARID5BQ14865 1188 aa6.57□□□□□ -1.36
XRCC4-205ENST00000511817 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
XRCC4-205ENST00000511817 CCDC155Q8N6L0 562 aa6.57□□□□□ -1.36
XRCC4-205ENST00000511817 BEND7Q8N7W2 519 aaPredicted RBP6.57□□□□□ -1.36
XRCC4-205ENST00000511817 CNTNAP5Q8WYK1 1306 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 TTLL8A6PVC2 850 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 ADAMTS2O95450 1211 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 FDX1P10109 184 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 GRM5P41594 1212 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 TSEN34Q9BSV6 310 aaKnown RBP6.56□□□□□ -1.36
XRCC4-205ENST00000511817 PCDHGC3Q9UN70 934 aa6.56□□□□□ -1.36
XRCC4-205ENST00000511817 MDM2Q00987 491 aaPredicted RBP6.55□□□□□ -1.36
XRCC4-205ENST00000511817 NUTM1Q86Y26 1132 aa6.55□□□□□ -1.36
XRCC4-205ENST00000511817 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
XRCC4-205ENST00000511817 SLC35F4A4IF30 521 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 CELA2BP08218 269 aaPredicted RBP6.54□□□□□ -1.36
XRCC4-205ENST00000511817 SV2AQ7L0J3 742 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 FOXJ1Q92949 421 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 TSHZ2Q9NRE2 1034 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 DESI1Q6ICB0 168 aa6.54□□□□□ -1.36
XRCC4-205ENST00000511817 ITGA6P23229 1130 aa6.53□□□□□ -1.36
XRCC4-205ENST00000511817 SRSF11Q05519 484 aaKnown RBP6.52□□□□□ -1.37
XRCC4-205ENST00000511817 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
XRCC4-205ENST00000511817 FIGNL2A6NMB9 653 aa6.51□□□□□ -1.37
XRCC4-205ENST00000511817 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
XRCC4-205ENST00000511817 PRR7Q8TB68 274 aa6.51□□□□□ -1.37
XRCC4-205ENST00000511817 CDC14CA4D256 554 aa6.5□□□□□ -1.37
XRCC4-205ENST00000511817 MAP2K5Q13163 448 aa6.5□□□□□ -1.37
XRCC4-205ENST00000511817 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
XRCC4-205ENST00000511817 ITGB7P26010 798 aa6.5□□□□□ -1.37
XRCC4-205ENST00000511817 ALYREFQ86V81 257 aaKnown RBP6.5□□□□□ -1.37
XRCC4-205ENST00000511817 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-205ENST00000511817 SPDYE5A6NIY4 337 aa6.49□□□□□ -1.37
XRCC4-205ENST00000511817 CTHP32929 405 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms