RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RAPGEF6Q8TEU7 1601 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 ITSN2Q9NZM3 1697 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 CALRP27797 417 aaKnown RBP6.97□□□□□ -1.29
USP38-203ENST00000511739 FOSBP53539 338 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 FAM69CQ0P6D2 419 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 ABCA5Q8WWZ7 1642 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 TCOF1Q13428 1488 aaKnown RBP6.97□□□□□ -1.29
USP38-203ENST00000511739 REC8O95072 547 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 BCL2L13Q9BXK5 485 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 ERC2O15083 957 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 NEBLO76041 1014 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 AK7Q96M32 723 aa6.97□□□□□ -1.29
USP38-203ENST00000511739 ZKSCAN2Q63HK3 967 aa6.96□□□□□ -1.29
USP38-203ENST00000511739 DDX49Q9Y6V7 483 aaKnown RBP6.96□□□□□ -1.29
USP38-203ENST00000511739 ANKRD30BQ9BXX2 1392 aa6.96□□□□□ -1.29
USP38-203ENST00000511739 ZNF608Q9ULD9 1512 aaPredicted RBP6.96□□□□□ -1.29
USP38-203ENST00000511739 TSPYL4Q9UJ04 414 aa6.96□□□□□ -1.29
USP38-203ENST00000511739 BRD4O60885 1362 aaPredicted RBP6.96□□□□□ -1.3
USP38-203ENST00000511739 MYO6Q9UM54 1294 aa6.96□□□□□ -1.3
USP38-203ENST00000511739 DIAPH1O60610 1272 aaKnown RBP6.96□□□□□ -1.3
USP38-203ENST00000511739 GNL3LQ9NVN8 582 aaKnown RBP6.96□□□□□ -1.3
USP38-203ENST00000511739 PROSER2Q86WR7 435 aaPredicted RBP6.96□□□□□ -1.3
USP38-203ENST00000511739 NCOA1Q15788 1441 aa6.96□□□□□ -1.3
USP38-203ENST00000511739 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 ZRSR2Q15696 482 aaKnown RBP6.95□□□□□ -1.3
USP38-203ENST00000511739 NUTM2GQ5VZR2 741 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 CCDC73Q6ZRK6 1079 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 API5Q9BZZ5 524 aaKnown RBP6.95□□□□□ -1.3
USP38-203ENST00000511739 VPS37CA5D8V6 355 aaPredicted RBP6.95□□□□□ -1.3
USP38-203ENST00000511739 NEFHP12036 1026 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
USP38-203ENST00000511739 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
USP38-203ENST00000511739 PANK3Q9H999 370 aa6.95□□□□□ -1.3
USP38-203ENST00000511739 WDR62O43379 1518 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 GPRASP1Q5JY77 1395 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 KDM4AO75164 1064 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 SASS6Q6UVJ0 657 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 OLFM4Q6UX06 510 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 TRIM21P19474 475 aaKnown RBP6.94□□□□□ -1.3
USP38-203ENST00000511739 SMC3Q9UQE7 1217 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
USP38-203ENST00000511739 SAMD9Q5K651 1589 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 KIAA0556O60303 1618 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 TXLNAP40222 546 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 NLRP6P59044 892 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 CNNM1Q9NRU3 951 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 DESP17661 470 aa6.94□□□□□ -1.3
USP38-203ENST00000511739 MYCNP04198 464 aaPredicted RBP6.93□□□□□ -1.3
USP38-203ENST00000511739 DEKP35659 375 aaKnown RBP6.93□□□□□ -1.3
USP38-203ENST00000511739 WDR70Q9NW82 654 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 PBRM1Q86U86 1689 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 CAGE1Q8TC20 777 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 TMOD2Q9NZR1 351 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 DCTN1Q14203 1278 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 DNAJC5Q9H3Z4 198 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 MATR3P43243 847 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP38-203ENST00000511739 RIPK4P57078 832 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 ZHX3Q9H4I2 956 aa6.93□□□□□ -1.3
USP38-203ENST00000511739 GPATCH8Q9UKJ3 1502 aaKnown RBP6.93□□□□□ -1.3
USP38-203ENST00000511739 ARHGEF11O15085 1522 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 ANKRD18AQ8IVF6 992 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 TTLL12Q14166 644 aaPredicted RBP6.92□□□□□ -1.3
USP38-203ENST00000511739 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
USP38-203ENST00000511739 MAPKBP1O60336 1514 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 TEX35Q5T0J7 233 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 PDILTQ8N807 584 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 RBM19Q9Y4C8 960 aaKnown RBP6.92□□□□□ -1.3
USP38-203ENST00000511739 NUP153P49790 1475 aaKnown RBP6.92□□□□□ -1.3
USP38-203ENST00000511739 SKOR2Q2VWA4 1001 aaPredicted RBP6.92□□□□□ -1.3
USP38-203ENST00000511739 CHMP5Q9NZZ3 219 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 TOM1L2Q6ZVM7 507 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 CCDC191Q8NCU4 936 aa6.92□□□□□ -1.3
USP38-203ENST00000511739 E9PSI1 815 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 UBTFL1P0CB47 393 aaPredicted RBP6.91□□□□□ -1.3
USP38-203ENST00000511739 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 TATP17735 454 aaPredicted RBP6.91□□□□□ -1.3
USP38-203ENST00000511739 ABTB2Q8N961 1025 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 MNS1Q8NEH6 495 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 SCLT1Q96NL6 688 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 SOGA3Q5TF21 947 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
USP38-203ENST00000511739 FSD1Q9BTV5 496 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 DNAI2Q9GZS0 605 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 DDX19BQ9UMR2 479 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 SEPT7Q16181 437 aaKnown RBP6.91□□□□□ -1.3
USP38-203ENST00000511739 PLEKHO1Q53GL0 409 aaPredicted RBP6.91□□□□□ -1.3
USP38-203ENST00000511739 SDF4Q9BRK5 362 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 SKIDA1Q1XH10 827 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 HSP90B2PQ58FF3 399 aa6.91□□□□□ -1.3
USP38-203ENST00000511739 TTC39AQ5SRH9 613 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 TTLL5Q6EMB2 1281 aa6.9□□□□□ -1.3
USP38-203ENST00000511739 DNAJC2Q99543 621 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms